lvm-tools 0.0.2.dev0__tar.gz → 0.0.4__tar.gz

{lvm_tools-0.0.2.dev0 → lvm_tools-0.0.4}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: lvm_tools
-Version: 0.0.2.dev0
+Version: 0.0.4
 Summary: Lazily read/encapsulate LVM DRP data in a modular way
 Author-email: Tom Hilder <Thomas.Hilder@monash.edu>
 License-File: LICENSE
@@ -10,6 +10,8 @@ Requires-Dist: dask>=2025.7.0
 Requires-Dist: numpy>=2.3.2
 Requires-Dist: scipy>=1.16.1
 Requires-Dist: xarray>=2025.7.1
+Provides-Extra: spectracles
+Requires-Dist: spectracles>=0.5.1; extra == 'spectracles'
 Description-Content-Type: text/markdown
 
 # lvm_tools
@@ -20,7 +22,25 @@ Feel free to contact me personally if you have any questions at all.
 
 ## Installation
 
-TODO
+Easiest is from PyPI either with `pip`
+
+```sh
+pip install lvm-tools
+```
+
+or `uv` (recommended)
+
+```sh
+uv add lvm-tools
+```
+
+Or, you can clone and build from source
+
+```sh
+git clone git@github.com:TomHilder/lvm_tools.git
+cd lvm_tools
+pip install -e .
+```
 
 ## Usage
 
@@ -36,7 +56,9 @@ TODO
 
 ## TODO
 
+- [ ] Relax version requirements from being strictly my environment (which is very up-to-date)
 - [ ] repr for FitData
 - [ ] Logging/hashing
 - [ ] Cache
 - [ ] OptConfig
+- [ ] Testing ?

{lvm_tools-0.0.2.dev0 → lvm_tools-0.0.4}/README.md

@@ -6,7 +6,25 @@ Feel free to contact me personally if you have any questions at all.
 
 ## Installation
 
-TODO
+Easiest is from PyPI either with `pip`
+
+```sh
+pip install lvm-tools
+```
+
+or `uv` (recommended)
+
+```sh
+uv add lvm-tools
+```
+
+Or, you can clone and build from source
+
+```sh
+git clone git@github.com:TomHilder/lvm_tools.git
+cd lvm_tools
+pip install -e .
+```
 
 ## Usage
 
@@ -22,7 +40,9 @@ TODO
 
 ## TODO
 
+- [ ] Relax version requirements from being strictly my environment (which is very up-to-date)
 - [ ] repr for FitData
 - [ ] Logging/hashing
 - [ ] Cache
 - [ ] OptConfig
+- [ ] Testing ?

{lvm_tools-0.0.2.dev0 → lvm_tools-0.0.4}/pyproject.toml

@@ -13,6 +13,9 @@ dependencies = [
     "xarray>=2025.7.1",
 ]
 
+[project.optional-dependencies]
+spectracles = ["spectracles>=0.5.1"]
+
 [build-system]
 requires = ["hatchling", "hatch-vcs"]
 build-backend = "hatchling.build"
@@ -33,8 +36,5 @@ version-file = "src/lvm_tools/_version.py"
 [tool.hatch.version]
 source = "vcs"
 
-[tool.hatch.version.raw-options]
-local_scheme = "no-local-version"
-
 [tool.ruff]
 line-length = 99 # Sorry PEP8 I'm a rebel

{lvm_tools-0.0.2.dev0 → lvm_tools-0.0.4}/src/lvm_tools/_version.py

@@ -17,5 +17,5 @@ __version__: str
 __version_tuple__: VERSION_TUPLE
 version_tuple: VERSION_TUPLE
 
-__version__ = version = '0.0.2.dev0'
-__version_tuple__ = version_tuple = (0, 0, 2, 'dev0')
+__version__ = version = '0.0.4'
+__version_tuple__ = version_tuple = (0, 0, 4)

lvm_tools-0.0.4/src/lvm_tools/data/coordinates.py

@@ -0,0 +1,33 @@
+"""coordinates.py - observation time and location extraction for LVM data processing."""
+
+from astropy.coordinates import EarthLocation
+from astropy.io.fits import Header
+from astropy.time import Time
+
+
+def get_mjd(header: Header) -> float:
+    if "INTSTART" in header and "INTEND" in header:
+        start_time = Time(header["INTSTART"], format="isot")
+        end_time = Time(header["INTEND"], format="isot")
+        mid_time = start_time + (end_time - start_time) / 2
+        return mid_time.mjd
+    else:
+        raise ValueError("Could not find sufficient time information in header")
+
+
+def get_observatory_code(header: Header) -> str:
+    observatory = header.get("OBSERVAT", "").strip()
+    known_observatories = ["LCO"]
+    if observatory in known_observatories:
+        return observatory
+    else:
+        raise ValueError(
+            f"Unknown observatory: {observatory}. Known observatories: {known_observatories}"
+        )
+
+
+def get_observatory_location(observatory: str) -> EarthLocation:
+    if observatory == "LCO":
+        return EarthLocation.of_site("Las Campanas Observatory")
+    else:
+        raise ValueError(f"Unknown observatory: {observatory}")

{lvm_tools-0.0.2.dev0 → lvm_tools-0.0.4}/src/lvm_tools/fit_data/fit_data.py

@@ -4,17 +4,36 @@ from __future__ import annotations
 
 import warnings
 from dataclasses import dataclass
-from typing import Callable
+from typing import TYPE_CHECKING, Callable
 
 import jax.numpy as jnp
 import numpy as np
 from jax.numpy import pi as π
 from jaxtyping import Array as JaxArray
-from modelling_lib.model.data import SpatialDataLVM
 from xarray import DataArray, Dataset
 
 from lvm_tools.physical_properties.barycentric_corr import get_v_barycentric
 
+if TYPE_CHECKING:
+    from spectracles.model.data import SpatialDataLVM
+
+try:
+    from spectracles.model.data import SpatialDataLVM
+except Exception as e:
+    _import_err = e
+    msg = (
+        "Could not import SpatialDataLVM from spectracles.model.data. "
+        "Install the optional dependency: pip install spectracles"
+    )
+
+    class SpatialDataLVM:  # stub preserves the API shape
+        def __init__(self, *args, **kwargs):
+            raise ModuleNotFoundError(msg) from _import_err
+
+    import warnings
+
+    warnings.warn(msg, ImportWarning)
+
 
 def to_π_domain(x):
     # return x * 2 * π - π

lvm_tools-0.0.2.dev0/src/lvm_tools/data/coordinates.py

@@ -1,73 +0,0 @@
-"""coordinates.py - observation time and location extraction for LVM data processing."""
-
-# NOTE: Code is generated by an LLM and may not be fully robust.
-
-import astropy.units as u
-from astropy.coordinates import EarthLocation
-from astropy.io.fits import Header
-from astropy.time import Time
-
-
-def get_mjd(header: Header) -> float:
-    # Method 1: Use INTSTART and INTEND if available (most precise)
-    if "INTSTART" in header and "INTEND" in header:
-        start_time = Time(header["INTSTART"], format="isot")
-        end_time = Time(header["INTEND"], format="isot")
-        mid_time = start_time + (end_time - start_time) / 2
-        # print(header["MJD"])
-        # mid_time = Time(header["MJD"], format="mjd")
-        # print(mid_time.mjd)
-        # print()
-
-        # Validation: check against header EXPTIME
-        # calculated_exptime = (end_time - start_time).to(u.second).value
-        # header_exptime = header.get("EXPTIME", 0.0)
-        # if abs(calculated_exptime - header_exptime) > 1.0:  # Allow 1s tolerance
-        #     print(
-        #         f"  WARNING: Calculated exptime ({calculated_exptime:.1f}s) differs from header EXPTIME ({header_exptime}s)"
-        #     )
-
-        return mid_time.mjd
-
-    # # Method 2: Use OBSTIME + EXPTIME/2 as fallback
-    # elif "OBSTIME" in header and "EXPTIME" in header:
-    #     start_time = Time(header["OBSTIME"], format="isot")
-    #     exptime = header["EXPTIME"] * u.second
-    #     mid_time = start_time + exptime / 2
-
-    #     return mid_time.mjd
-
-    # # Method 3: Use header MJD + EXPTIME/2 (least precise, integer MJD)
-    # elif "MJD" in header and "EXPTIME" in header:
-    #     mjd_start = header["MJD"]  # This appears to be integer MJD
-    #     exptime_days = header["EXPTIME"] / 86400.0  # Convert seconds to days
-    #     mjd_mid = mjd_start + exptime_days / 2
-
-    #     return mjd_mid
-
-    else:
-        raise ValueError("Could not find sufficient time information in header")
-
-
-def get_observatory_code(header: Header) -> str:
-    observatory = header.get("OBSERVAT", "").strip()
-
-    # Just return the observatory code string
-    # You can convert to EarthLocation later when needed
-    known_observatories = ["LCO"]  # Add other LVM observatory codes as needed
-
-    if observatory in known_observatories:
-        return observatory
-    else:
-        raise ValueError(
-            f"Unknown observatory: {observatory}. Known observatories: {known_observatories}"
-        )
-
-
-def get_observatory_location(observatory: str) -> EarthLocation:
-    # LCO = Las Campanas Observatory
-    if observatory == "LCO":
-        return EarthLocation.of_site("Las Campanas Observatory")
-    else:
-        # Add other observatories as needed
-        raise ValueError(f"Unknown observatory: {observatory}")