loqusdb 2.7.8__tar.gz → 2.7.10__tar.gz

{loqusdb-2.7.8 → loqusdb-2.7.10}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: loqusdb
-Version: 2.7.8
+Version: 2.7.10
 Summary: A simple observation count database
 License: MIT
 Author: Your Name

{loqusdb-2.7.8 → loqusdb-2.7.10}/loqusdb/__init__.py

@@ -4,7 +4,7 @@ from pymongo import ASCENDING, IndexModel
 
 logger = logging.getLogger(__name__)
 
-__version__ = "2.7.7"
+__version__ = "2.7.10"
 
 INDEXES = {
     "variant": [

{loqusdb-2.7.8 → loqusdb-2.7.10}/loqusdb/build_models/case.py

@@ -6,15 +6,8 @@ from loqusdb.models import Case, Individual
 LOG = logging.getLogger(__name__)
 
 
-def get_individual_positions(individuals):
-    """Return a dictionary with individual positions
-
-    Args:
-        individuals(list): A list with vcf individuals in correct order
-
-    Returns:
-        ind_pos(dict): Map from ind_id -> index position
-    """
+def get_individual_positions(individuals: list[str]) -> dict[str, int]:
+    """Return a dictionary with individual positions."""
     ind_pos = {}
     if individuals:
         for i, ind in enumerate(individuals):
@@ -35,7 +28,7 @@ def build_case(
     matches=None,
     profile_path=None,
 ):
-    """Build a Case from the given information
+    """Build a Case from the given information.
 
     Args:
         case(ped_parser.Family): A family object

{loqusdb-2.7.8 → loqusdb-2.7.10}/pyproject.toml

@@ -1,6 +1,6 @@
 [tool.poetry]
 name = "loqusdb"
-version = "2.7.8"
+version = "2.7.10"
 description = "A simple observation count database"
 authors = ["Your Name <you@example.com>"]
 license = "MIT"