livelike 1.5.1__tar.gz

livelike-1.5.1/.ci/py311_livelike_latest.yaml

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+#########################################################################
+# Install all versions from ** conda through micromamba where possible **
+#########################################################################
+
+name: py311_livelike_latest
+channels:
+  - conda-forge
+dependencies:
+  - python=3.11
+  - awkward
+  - ca-certificates
+  - deprecation
+  - dill
+  - geopandas
+  - git
+  - jax>=0.4.31
+  - jaxlib>=0.4.31
+  - jaxopt>=0.8.3
+  - libpysal
+  - multiprocess
+  - networkx
+  - numpy
+  - pandas
+  - pip
+  - pyarrow
+  - pygris
+  - scipy
+  - shapely
+  - tqdm
+  # tests
+  - pre-commit
+  - pytest
+  - pytest-cov
+  - pytest-xdist
+  - ruff
+  - setuptools_scm
+  - watermark
+  - pip:
+    # Likeness ecosystem <<< move to above conda section once pymedm available there
+    - likeness_vitals
+    - pymedm

livelike-1.5.1/.ci/py311_livelike_oldest.yaml

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+#########################################################################
+# Install all versions from ** conda through micromamba where possible **
+#########################################################################
+
+name: py311_livelike_oldest
+channels:
+  - conda-forge
+dependencies:
+  - python=3.11
+  - awkward=2.6.2
+  - ca-certificates>=2025.10.5 # see gh#97
+  - deprecation
+  - dill
+  - geopandas=1.1
+  - git
+  - jax>=0.4.31
+  - jaxlib>=0.4.31
+  - jaxopt>=0.8.3
+  - libpysal=4.12.1
+  - multiprocess>=0.70.15
+  - networkx=3.2.1
+  - numpy=1.26.4
+  - pandas=2.2.1
+  - pygris
+  - pip
+  - pyarrow
+  - scipy=1.12.0
+  - shapely=2.0
+  - tqdm
+  # tests
+  - pre-commit
+  - pytest
+  - pytest-cov
+  - pytest-xdist
+  - ruff
+  - setuptools_scm
+  - watermark
+  - pip:
+    # Likeness ecosystem <<< move to above conda section once pymedm available there
+    - likeness_vitals
+    - pymedm

livelike-1.5.1/.ci/py312_livelike_latest.yaml

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+#########################################################################
+# Install all versions from ** conda through micromamba where possible **
+#########################################################################
+
+name: py312_livelike_latest
+channels:
+  - conda-forge
+dependencies:
+  - python=3.12
+  - awkward
+  - ca-certificates
+  - deprecation
+  - dill
+  - geopandas
+  - jax>=0.5.3
+  - jaxlib>=0.5.3
+  - jaxopt>=0.8.3
+  - git
+  - libpysal
+  - multiprocess
+  - networkx
+  - numpy
+  - pandas
+  - pygris
+  - pip
+  - pyarrow
+  - scipy
+  - shapely
+  - tqdm
+  # tests
+  - pre-commit
+  - pytest
+  - pytest-cov
+  - pytest-xdist
+  - ruff
+  - setuptools_scm
+  - watermark
+  - pip:
+    # Likeness ecosystem <<< move to above conda section once pymedm available there
+    - likeness_vitals
+    - pymedm

livelike-1.5.1/.ci/py312_pandas2_livelike_latest.yaml

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+#########################################################################
+# Install all versions from ** conda through micromamba where possible **
+#########################################################################
+
+name: py312_pandas2_livelike_latest
+channels:
+  - conda-forge
+dependencies:
+  - python=3.12
+  - awkward
+  - ca-certificates
+  - deprecation
+  - dill
+  - geopandas
+  - jax>=0.5.3
+  - jaxlib>=0.5.3
+  - jaxopt>=0.8.3
+  - git
+  - libpysal
+  - multiprocess
+  - networkx
+  - numpy
+  - pandas=2
+  - pygris
+  - pip
+  - pyarrow
+  - scipy
+  - shapely
+  - tqdm
+  # tests
+  - pre-commit
+  - pytest
+  - pytest-cov
+  - pytest-xdist
+  - ruff
+  - setuptools_scm
+  - watermark
+  - pip:
+    # Likeness ecosystem <<< move to above conda section once pymedm available there
+    - likeness_vitals
+    - pymedm

livelike-1.5.1/.ci/py313_livelike_latest.yaml

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+#########################################################################
+# Install all versions from ** conda through micromamba where possible **
+#########################################################################
+
+name: py313_livelike_latest
+channels:
+  - conda-forge
+dependencies:
+  - python=3.13
+  - awkward
+  - ca-certificates
+  - deprecation
+  - dill
+  - geopandas
+  - git
+  - jax>=0.5.3
+  - jaxlib>=0.5.3
+  - jaxopt>=0.8.3
+  - libpysal
+  - multiprocess
+  - networkx
+  - numpy
+  - pandas
+  - pygris
+  - pip
+  - pyarrow
+  - scipy
+  - shapely
+  - tqdm
+  # tests
+  - pre-commit
+  - pytest
+  - pytest-cov
+  - pytest-xdist
+  - ruff
+  - setuptools_scm
+  - watermark
+  - pip:
+    # Likeness ecosystem <<< move to above conda section once pymedm available there
+    - likeness_vitals
+    - pymedm

livelike-1.5.1/.ci/py314_livelike_dev.yaml

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+#########################################################################################
+# Install all versions from ** bleeding edge git repo or nightly builds where possible **
+#########################################################################################
+
+name: py312_livelike_dev
+channels:
+  - conda-forge
+dependencies:
+  - python=3.12
+  - awkward
+  - ca-certificates
+  - dill
+  - cython
+  - deprecation
+  - geos
+  - git
+  - multiprocess
+  - pip
+  - pyarrow
+  # tests
+  - pre-commit
+  - pytest
+  - pytest-cov
+  - pytest-xdist
+  - ruff
+  - setuptools_scm
+  - tqdm
+  - watermark
+  # pip installations
+  - pip:
+    # nightly build versions
+    - --pre \
+      --extra-index https://pypi.anaconda.org/scipy-wheels-nightly/simple \
+      --extra-index-url https://pypi.org/simple
+    - awkward
+    - jax>=0.5.3
+    - jaxlib>=0.5.3
+    - jaxopt>=0.8.3
+    - matplotlib
+    - networkx
+    - numpy
+    - pandas
+    - scipy
+    - shapely
+    # bleeding edge versions
+    - git+https://github.com/geopandas/geopandas.git@main
+    - git+https://github.com/pysal/libpysal.git@main
+    - git+https://github.com/walkerke/pygris.git@main
+    # bleeding Likeness ecosystem
+    - git+https://github.com/likeness-pop/likeness-vitals.git@develop
+    - git+https://github.com/likeness-pop/pymedm.git@develop

livelike-1.5.1/.ci/py314_livelike_latest.yaml

@@ -0,0 +1,41 @@
+#########################################################################
+# Install all versions from ** conda through micromamba where possible **
+#########################################################################
+
+name: py314_livelike_latest
+channels:
+  - conda-forge
+dependencies:
+  - python=3.14
+  - awkward
+  - ca-certificates
+  - deprecation
+  - dill
+  - geopandas
+  - git
+  - jax>=0.5.3
+  - jaxlib>=0.5.3
+  - jaxopt>=0.8.3
+  - libpysal
+  - multiprocess
+  - networkx
+  - numpy
+  - pandas
+  - pygris
+  - pip
+  - pyarrow
+  - scipy
+  - shapely
+  - tqdm
+  # tests
+  - pre-commit
+  - pytest
+  - pytest-cov
+  - pytest-xdist
+  - ruff
+  - setuptools_scm
+  - watermark
+  - pip:
+    # Likeness ecosystem <<< move to above conda section once pymedm available there
+    - likeness_vitals
+    - pymedm

livelike-1.5.1/.ci/py314_pandas2_livelike_latest.yaml

@@ -0,0 +1,41 @@
+#########################################################################
+# Install all versions from ** conda through micromamba where possible **
+#########################################################################
+
+name: py314_pandas2_livelike_latest
+channels:
+  - conda-forge
+dependencies:
+  - python=3.14
+  - awkward
+  - ca-certificates
+  - deprecation
+  - dill
+  - geopandas
+  - git
+  - jax>=0.5.3
+  - jaxlib>=0.5.3
+  - jaxopt>=0.8.3
+  - libpysal
+  - multiprocess
+  - networkx
+  - numpy
+  - pandas=2
+  - pygris
+  - pip
+  - pyarrow
+  - scipy
+  - shapely
+  - tqdm
+  # tests
+  - pre-commit
+  - pytest
+  - pytest-cov
+  - pytest-xdist
+  - ruff
+  - setuptools_scm
+  - watermark
+  - pip:
+    # Likeness ecosystem <<< move to above conda section once pymedm available there
+    - likeness_vitals
+    - pymedm

livelike-1.5.1/.github/workflows/continuous_integration.yml

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+---
+name: Continuous Integration
+
+on:
+  push:
+    branches: [develop]
+  pull_request:
+    branches:
+      - "*"
+  schedule:
+    - cron: "59 23 * * *"
+  workflow_dispatch:
+    inputs:
+      version:
+        description: Manual CI Run
+        default: test
+        required: false
+
+jobs:
+  tests:
+    name: ${{ matrix.os }}, ${{ matrix.environment-file }}
+    runs-on: ${{ matrix.os }}
+    timeout-minutes: 60
+    env:
+      CENSUS_API_KEY: ${{ secrets.CENSUS_API_KEY }}
+    strategy:
+      matrix:
+        os: [ubuntu-latest]
+        environment-file: [
+          py311_livelike_oldest,
+          py311_livelike_latest,
+          py312_livelike_latest,
+          py312_pandas2_livelike_latest,
+          py313_livelike_latest,
+          py314_livelike_latest,
+          py314_pandas2_livelike_latest,
+          py314_livelike_dev,
+        ]
+        include:
+          - environment-file: py314_livelike_latest
+            os: macos-latest  # Apple Silicon
+          - environment-file: py314_pandas2_livelike_latest
+            os: macos-latest  # Apple Silicon
+      fail-fast: false
+      
+
+    defaults:
+      run:
+        shell: bash -l {0}
+
+    steps:
+      - name: checkout repo
+        uses: actions/checkout@v6
+        with:
+          fetch-depth: 0  # Fetch all history for all branches and tags.
+
+      - name: setup micromamba
+        uses: mamba-org/setup-micromamba@v2
+        with:
+          environment-file: .ci/${{ matrix.environment-file }}.yaml
+          micromamba-version: "latest"
+
+      - name: install package
+        run: "pip install -e . --no-cache-dir --no-deps"
+
+      - name: spatial versions
+        run: 'python -c "import geopandas; geopandas.show_versions();"'
+
+      - name: run tests
+        run: |
+          pytest \
+          livelike/ \
+          --verbose \
+          -r a \
+          --numprocesses logical \
+          --color yes \
+          --cov livelike \
+          --cov-append \
+          --cov-report term-missing \
+          --cov-report xml . \
+          --env ${{ matrix.environment-file }} \
+          --local False
+
+      - name: codecov
+        uses: codecov/codecov-action@v5
+        with:
+          token: ${{ secrets.CODECOV_TOKEN }}

livelike-1.5.1/.github/workflows/release_to_pypi.yml

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+---
+name: Publish to PyPI / GitHub
+
+on:
+  push:
+    tags:
+      - "v*"
+
+jobs:
+  build-n-publish:
+    name: Build and publish to PyPI
+    runs-on: ubuntu-latest
+    permissions:
+      id-token: write  # MANDATORY for trusted publishing to PyPI
+      contents: write  # MANDATORY for the Github release action
+
+    steps:
+      - uses: actions/checkout@v6
+        with:
+          fetch-depth: 0
+
+      - name: Set up Python
+        uses: actions/setup-python@v6
+        with:
+          python-version: "3.x"
+
+      - name: Build source and wheel distributions
+        run: |
+          python -m pip install --upgrade pip
+          python -m pip install --upgrade build twine
+          python -m build
+          twine check --strict dist/*
+
+      - name: Create Release Notes
+        uses: actions/github-script@v8
+        with:
+          github-token: ${{secrets.GITHUB_TOKEN}}
+          script: |
+            await github.request(`POST /repos/${{ github.repository }}/releases`, {
+                tag_name: "${{ github.ref }}",
+                generate_release_notes: true
+            });
+
+      - name: Publish distribution to PyPI
+        uses: pypa/gh-action-pypi-publish@release/v1

livelike-1.5.1/.gitignore

@@ -0,0 +1,38 @@
+temp/*
+acs_cache/*
+acs_cache/temp.txt
+acs_cache/.ipynb_checkpoints/*
+notebooks/livelike_acs_cache/*
+notebooks/replicate_demo_cache/*
+
+.coverage*
+
+*.swp
+*.pyc
+.rope*
+.ipynb_checkpoints/*
+.ipynb_checkpoints
+*/.ipynb_checkpoints/*
+demo/.ipynb_checkpoints/*
+.DS_Store
+*.egg
+*.egg-info
+dist
+build
+eggs
+parts
+bin
+var
+sdist
+develop-eggs
+.installed.cfg
+lib
+lib64
+__pycache__
+
+*.log
+
+*.coverage
+coverage.xml
+
+*censusapikey.txt*

livelike-1.5.1/.pre-commit-config.yaml

@@ -0,0 +1,10 @@
+files: "livelike\/|notebooks\/"
+repos:
+  - repo: https://github.com/astral-sh/ruff-pre-commit
+    rev: "v0.15.0"
+    hooks:
+      - id: ruff-check
+      - id: ruff-format
+
+ci:
+  autofix_prs: false

livelike-1.5.1/LICENSE

@@ -0,0 +1,47 @@
+Copyright (c) 2025, UT-Battelle, LLC and Battelle Memorial Institute.
+All rights reserved.
+
+Open Source License:
+
+Subject to the conditions of this License, UT-Battelle, LLC and Battelle
+Memorial Institute hereby grant, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), a
+perpetual, worldwide, non-exclusive, no-charge, royalty-free, irrevocable
+copyright license to use, copy, modify, merge, publish, distribute, and/or
+sublicense copies of the Software.
+
+1. Redistributions of Software must retain the above open source license grant,
+copyright and license notices, this list of conditions, and the disclaimer
+listed below.  Changes or modifications to, or derivative works of the
+Software must be noted with comments and the contributor and organization’s
+name.  If the Software is protected by a proprietary trademark owned by
+UT-Battelle, LLC or Battelle Memorial Institute or the Department of Energy,
+then derivative works of the Software may not be distributed using the
+trademark without the prior written approval of the trademark owner.
+
+2. Neither the names of Licensor nor the Department of Energy may be used to
+endorse or promote products derived from this Software without their specific
+prior written permission.
+ 
+3. The Software, with or without modification, must include the following
+acknowledgment: "This product includes software produced by UT-Battelle, LLC
+under Contract No. DE-AC05-00OR22725 and Battelle Memorial Institute under
+Contract No. DE-AC05-76RL01830 with the Department of Energy.”
+ 
+
+
+-------------------------------------------------------------------------------
+
+DISCLAIMER:
+
+UT-BATTELLE, LLC, BATTELLE MEMORIAL INSTITUTE, AND THE GOVERNMENT MAKE NO
+REPRESENTATIONS AND DISCLAIM ALL WARRANTIES, BOTH EXPRESSED AND IMPLIED.
+THERE ARE NO EXPRESS OR IMPLIED WARRANTIES OF MERCHANTABILITY OR FITNESS FOR
+A PARTICULAR PURPOSE, OR THAT THE USE OF THE SOFTWARE WILL NOT INFRINGE ANY
+PATENT, COPYRIGHT, TRADEMARK, OR OTHER PROPRIETARY RIGHTS, OR THAT THE SOFTWARE
+WILL ACCOMPLISH THE INTENDED RESULTS OR THAT THE SOFTWARE OR ITS USE WILL NOT
+RESULT IN INJURY OR DAMAGE.  THE USER ASSUMES RESPONSIBILITY FOR ALL
+LIABILITIES, PENALTIES, FINES, CLAIMS, CAUSES OF ACTION, AND COSTS AND
+EXPENSES, CAUSED BY, RESULTING FROM OR ARISING OUT OF, IN WHOLE OR IN PART
+THE USE, STORAGE OR DISPOSAL OF THE SOFTWARE.
+

livelike-1.5.1/NOTICE

@@ -0,0 +1,24 @@
+Disclaimer:
+ 
+This material was prepared as an account of work sponsored by an agency of the
+United States Government.  Neither the United States Government nor the United
+States Department of Energy, nor UT-Battelle, nor Battelle Memorial Institute
+nor any of their employees, nor any jurisdiction or organization that has
+cooperated in the development of these materials, makes any warranty, express
+or implied, or assumes any legal liability or responsibility for the accuracy,
+completeness, or usefulness or any information, apparatus, product, software,
+or process disclosed, or represents that its use would not infringe privately
+owned rights.
+
+Reference herein to any specific commercial product, process, or service by
+trade name, trademark, manufacturer, or otherwise does not necessarily
+constitute or imply its endorsement, recommendation, or favoring by the United
+States Government or any agency thereof, or UT Batelle or Battelle Memorial
+Institute. The views and opinions of authors expressed herein do not
+necessarily state or reflect those of the United States Government or any
+agency thereof.
+
+OAK RIDGE NATIONAL LABORATORY
+operated by UT-BATTELLE for the
+UNITED STATES DEPARTMENT OF ENERGY
+under Contract DE-AC05-00OR22725