live-rail 0.0__tar.gz

live_rail-0.0/.github/workflows/linting.yml

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+# This workflow will install Python dependencies,
+# then perform static linting analysis.
+
+name: Lint
+
+on:
+  push:
+    branches: [main]
+  pull_request:
+    branches: [main]
+
+jobs:
+  build:
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v3
+      - name: Set up Python
+        uses: actions/setup-python@v4
+        with:
+          python-version: '3.13'
+      - name: Install dependencies
+        run: |
+          sudo apt-get update
+          python -m pip install --upgrade pip
+          pip install .
+          pip install .[dev]
+          if [ -f requirements.txt ]; then pip install -r requirements.txt; fi
+      - name: Type checking
+        run: |
+          mypy src
+      - name: Linting
+        run: |
+          ruff check src tests

live_rail-0.0/.github/workflows/publish-to-pypi.yml

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+# This workflow will upload a Python Package using
+# Twine when a release is created
+# For more information see:
+# https://github.com/pypa/gh-action-pypi-publish#trusted-publishing
+
+# This workflow uses actions that are not certified by GitHub.
+# They are provided by a third-party and are governed by
+# separate terms of service, privacy policy, and support
+# documentation.
+
+name: Upload Python Package
+
+on:
+  release:
+    types: [published]
+
+permissions:
+  contents: read
+
+jobs:
+  deploy:
+
+    runs-on: ubuntu-latest
+    permissions:
+      id-token: write
+    steps:
+      - uses: actions/checkout@v3
+      - name: Set up Python
+        uses: actions/setup-python@v4
+        with:
+          python-version: '3.13'
+      - name: Install dependencies
+        run: |
+          python -m pip install --upgrade pip
+          pip install build
+      - name: Build package
+        run: python -m build
+      - name: Publish package
+        uses: pypa/gh-action-pypi-publish@release/v1

live_rail-0.0/.github/workflows/smoke-test.yml

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+# This workflow will run daily at 06:45.
+# It will install Python dependencies and run tests with a variety of
+# Python versions.
+
+name: Unit test smoke test
+
+on:
+  schedule:
+    - cron: 45 6 * * *
+
+  # Allows you to run this workflow manually from the Actions tab
+  workflow_dispatch:
+
+jobs:
+  build:
+
+    runs-on: ubuntu-latest
+    strategy:
+      matrix:
+        python-version: ['3.13']
+    steps:
+      - uses: actions/checkout@v3
+      - name: Set up Python ${{ matrix.python-version }}
+        uses: actions/setup-python@v4
+        with:
+          python-version: ${{ matrix.python-version }}
+      - name: Install dependencies
+        run: |
+          sudo apt-get update
+          python -m pip install --upgrade pip
+          pip install .
+          pip install .[dev]
+          if [ -f requirements.txt ]; then pip install -r requirements.txt; fi
+      - name: Run unit tests with pytest
+        run: |
+          python -m pytest tests

live_rail-0.0/.github/workflows/testing-and-coverage.yml

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+# This workflow will install Python dependencies, run tests and report
+# code coverage with a variety of Python versions
+
+name: Unit test and code coverage
+
+on:
+  schedule:
+    - cron: 45 7 * * 1
+  push:
+    branches: [main]
+  pull_request:
+    branches: [main]
+
+jobs:
+  build:
+
+    runs-on: ubuntu-latest
+    strategy:
+      matrix:
+        python-version: ['3.13']
+    steps:
+      - uses: actions/checkout@v3
+        with:
+          fetch-tags: true
+          fetch-depth: 0
+      - name: Set up Python ${{ matrix.python-version }}
+        uses: actions/setup-python@v4
+        with:
+          python-version: ${{ matrix.python-version }}
+      - name: Install dependencies
+        run: |
+          sudo apt-get update
+          python -m pip install --upgrade pip
+          pip install .
+          pip install .[dev]
+          if [ -f requirements.txt ]; then pip install -r requirements.txt; fi
+      - name: Run unit tests with pytest
+        run: |
+          python -m pytest tests

live_rail-0.0/.gitignore

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+# Byte-compiled / optimized / DLL files
+__pycache__/
+*.py[codz]
+*$py.class
+
+# C extensions
+*.so
+
+# Distribution / packaging
+.Python
+_version.py
+build/
+develop-eggs/
+dist/
+downloads/
+eggs/
+.eggs/
+lib/
+lib64/
+parts/
+sdist/
+var/
+wheels/
+share/python-wheels/
+*.egg-info/
+.installed.cfg
+*.egg
+MANIFEST
+
+# specific stuff
+rail_svc.db
+sandbox.tgz
+archive/
+data/
+projects/
+
+# PyInstaller
+#  Usually these files are written by a python script from a template
+#  before PyInstaller builds the exe, so as to inject date/other infos into it.
+*.manifest
+*.spec
+
+# Installer logs
+pip-log.txt
+pip-delete-this-directory.txt
+
+# Unit test / coverage reports
+htmlcov/
+.tox/
+.nox/
+.coverage
+.coverage.*
+.cache
+nosetests.xml
+coverage.xml
+*.cover
+*.py.cover
+.hypothesis/
+.pytest_cache/
+cover/
+
+# Translations
+*.mo
+*.pot
+
+# Django stuff:
+*.log
+local_settings.py
+db.sqlite3
+db.sqlite3-journal
+
+# Flask stuff:
+instance/
+.webassets-cache
+
+# Scrapy stuff:
+.scrapy
+
+# Sphinx documentation
+docs/_build/
+
+# PyBuilder
+.pybuilder/
+target/
+
+# Jupyter Notebook
+.ipynb_checkpoints
+
+# IPython
+profile_default/
+ipython_config.py
+
+# pyenv
+#   For a library or package, you might want to ignore these files since the code is
+#   intended to run in multiple environments; otherwise, check them in:
+# .python-version
+
+# pipenv
+#   According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control.
+#   However, in case of collaboration, if having platform-specific dependencies or dependencies
+#   having no cross-platform support, pipenv may install dependencies that don't work, or not
+#   install all needed dependencies.
+#Pipfile.lock
+
+# UV
+#   Similar to Pipfile.lock, it is generally recommended to include uv.lock in version control.
+#   This is especially recommended for binary packages to ensure reproducibility, and is more
+#   commonly ignored for libraries.
+#uv.lock
+
+# poetry
+#   Similar to Pipfile.lock, it is generally recommended to include poetry.lock in version control.
+#   This is especially recommended for binary packages to ensure reproducibility, and is more
+#   commonly ignored for libraries.
+#   https://python-poetry.org/docs/basic-usage/#commit-your-poetrylock-file-to-version-control
+#poetry.lock
+#poetry.toml
+
+# pdm
+#   Similar to Pipfile.lock, it is generally recommended to include pdm.lock in version control.
+#   pdm recommends including project-wide configuration in pdm.toml, but excluding .pdm-python.
+#   https://pdm-project.org/en/latest/usage/project/#working-with-version-control
+#pdm.lock
+#pdm.toml
+.pdm-python
+.pdm-build/
+
+# pixi
+#   Similar to Pipfile.lock, it is generally recommended to include pixi.lock in version control.
+#pixi.lock
+#   Pixi creates a virtual environment in the .pixi directory, just like venv module creates one
+#   in the .venv directory. It is recommended not to include this directory in version control.
+.pixi
+
+# PEP 582; used by e.g. github.com/David-OConnor/pyflow and github.com/pdm-project/pdm
+__pypackages__/
+
+# Celery stuff
+celerybeat-schedule
+celerybeat.pid
+
+# SageMath parsed files
+*.sage.py
+
+# Environments
+.env
+.envrc
+.venv
+env/
+venv/
+ENV/
+env.bak/
+venv.bak/
+
+# Spyder project settings
+.spyderproject
+.spyproject
+
+# Rope project settings
+.ropeproject
+
+# mkdocs documentation
+/site
+
+# mypy
+.mypy_cache/
+.dmypy.json
+dmypy.json
+
+# Pyre type checker
+.pyre/
+
+# pytype static type analyzer
+.pytype/
+
+# Cython debug symbols
+cython_debug/
+
+# PyCharm
+#  JetBrains specific template is maintained in a separate JetBrains.gitignore that can
+#  be found at https://github.com/github/gitignore/blob/main/Global/JetBrains.gitignore
+#  and can be added to the global gitignore or merged into this file.  For a more nuclear
+#  option (not recommended) you can uncomment the following to ignore the entire idea folder.
+#.idea/
+
+# Abstra
+# Abstra is an AI-powered process automation framework.
+# Ignore directories containing user credentials, local state, and settings.
+# Learn more at https://abstra.io/docs
+.abstra/
+
+# Visual Studio Code
+#  Visual Studio Code specific template is maintained in a separate VisualStudioCode.gitignore 
+#  that can be found at https://github.com/github/gitignore/blob/main/Global/VisualStudioCode.gitignore
+#  and can be added to the global gitignore or merged into this file. However, if you prefer, 
+#  you could uncomment the following to ignore the entire vscode folder
+# .vscode/
+
+# Ruff stuff:
+.ruff_cache/
+
+# PyPI configuration file
+.pypirc
+
+# Cursor
+#  Cursor is an AI-powered code editor. `.cursorignore` specifies files/directories to
+#  exclude from AI features like autocomplete and code analysis. Recommended for sensitive data
+#  refer to https://docs.cursor.com/context/ignore-files
+.cursorignore
+.cursorindexingignore
+
+# Marimo
+marimo/_static/
+marimo/_lsp/
+__marimo__/

live_rail-0.0/CLAUDE.md

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+# CLAUDE.md
+
+This file provides guidance to Claude Code when working with code in this repository.
+
+## Project Overview
+
+`live-rail` is a unified Dash dashboard for managing and visualizing photometric redshift (photo-z) estimation data from the LSST DESC RAIL framework. It provides CRUD management of catalog entities, estimation workflow execution, and interactive visualization — all backed by the `pz-rail-svc` package for data access.
+
+## Build & Development Commands
+
+```bash
+# Install in development mode
+pip install -e '.[dev]'
+
+# Run the dashboard (local DB)
+live-rail dashboard --backend local --db-url "sqlite+aiosqlite:///rail_svc.db"
+
+# Run unit tests (excludes integration tests)
+pytest
+
+# Run integration tests (requires real DB + data files)
+pytest tests/test_integration.py -m integration -v
+
+# Run all tests together
+pytest -m "integration or not integration"
+
+# Lint
+ruff check src/ tests/
+ruff format src/ tests/
+
+# Type checking
+mypy src/
+
+# Pylint
+pylint src/live_rail/ --rcfile=pyproject.toml
+```
+
+## Architecture
+
+```
+src/live_rail/
+├── app.py                    # Direct entry point (python -m live_rail.app)
+├── rail_svc_utils.py         # Database setup helpers (safe_insert_*)
+├── backend/
+│   └── provider.py           # BackendProvider singleton — switches local_sync/remote_sync
+├── cli/
+│   └── commands.py           # Click CLI with 'dashboard' command
+├── wrappers/
+│   ├── object_wrapper.py     # ObjectWrapper, CatalogWrapper, MultiCatalogWrapper ABCs
+│   └── rail_svc_wrapper.py   # RailSvcLocal/RemoteCatalogWrapper implementations
+└── dashboard/
+    ├── app.py                # Dash app factory (create_app, use_pages=True)
+    ├── layout.py             # Top-level layout: sidebar + page_container + logo
+    ├── nav.py                # Sidebar navigation
+    └── pages/
+        ├── home.py           # Landing page with connection status
+        ├── settings.py       # Backend mode/URL configuration
+        ├── crud/
+        │   ├── _base.py      # CrudPageConfig + register_crud_callbacks factory
+        │   ├── _components.py # AG Grid table, form builders, modals
+        │   └── *.py          # One file per entity (algorithm, dataset, etc.)
+        ├── estimation/       # Estimate PDF, Ensemble, Dataset pages
+        └── visualizers/      # Single + Multi catalog interactive visualizers
+```
+
+### Key Design Patterns
+
+- **BackendProvider singleton** (`backend/provider.py`): All data access goes through `BackendProvider.get()` which dispatches to `rail_svc.local_sync` or `rail_svc.remote_sync` based on settings.
+- **CRUD page factory** (`pages/crud/_base.py`): `register_crud_callbacks(config)` generates all callbacks from a `CrudPageConfig` dataclass. Each entity page is ~15 lines.
+- **AG Grid tables**: Using `dash-ag-grid` with `cellClicked` for detail popups and FK lookups.
+- **Wrapper caching**: Visualizer pages cache `RailSvcLocalCatalogWrapper` instances per dataset_id to avoid re-initialization on every callback.
+- **Dash Pages**: Multi-page app with `use_pages=True`. Pages auto-register via `dash.register_page()` at module import time.
+
+## Configuration
+
+- `--backend local|remote` — which rail_svc backend to use
+- `--db-url` — SQLite URL for local mode (default: `sqlite+aiosqlite:///rail_svc.db`)
+- `--server-url` — FastAPI server URL for remote mode
+- `--catalog-yaml` — RAIL catalog YAML config (default: `nb/sandbox_catalogs.yaml`)
+
+## Testing
+
+- Unit tests mock all `rail_svc` dependencies and run in <2s
+- Integration tests require `rail_svc.db` + `nb/sandbox_catalogs.yaml` + HDF5 data files
+- Integration tests are marked with `@pytest.mark.integration` and excluded from default runs
+- Dash page modules can't be imported at top level in tests (triggers `register_page` error) — import inside test methods after creating a Dash app
+
+## Code Style
+
+- Line length: 110 (ruff + pylint)
+- Ruff with E, F, W, I rules (includes isort)
+- mypy with `disallow_untyped_defs = false` (Dash callbacks are untyped)
+- Pylint at 10.00/10
+
+## Data Files Required for Integration Tests
+
+- `rail_svc.db` — SQLite database with catalog entities
+- `nb/sandbox_catalogs.yaml` — RAIL catalog tag definitions
+- HDF5 data files referenced by dataset paths in the DB (at absolute paths on disk)

live_rail-0.0/LICENSE

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+MIT License
+
+Copyright (c) 2026 LSST Dark Energy Science Collaboration (DESC)
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE.

live_rail-0.0/PKG-INFO

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+Metadata-Version: 2.4
+Name: live-rail
+Version: 0.0
+Summary: Unified dashboard for RAIL photometric redshift estimation
+Author-email: The LSST DESC PZ WG <echarles@slac.stanford.edu>
+License: MIT License
+        
+        Copyright (c) 2026 LSST Dark Energy Science Collaboration (DESC)
+        
+        Permission is hereby granted, free of charge, to any person obtaining a copy
+        of this software and associated documentation files (the "Software"), to deal
+        in the Software without restriction, including without limitation the rights
+        to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+        copies of the Software, and to permit persons to whom the Software is
+        furnished to do so, subject to the following conditions:
+        
+        The above copyright notice and this permission notice shall be included in all
+        copies or substantial portions of the Software.
+        
+        THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+        IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+        FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+        AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+        LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+        OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+        SOFTWARE.
+        
+Classifier: Development Status :: 4 - Beta
+Classifier: License :: OSI Approved :: MIT License
+Classifier: Intended Audience :: Developers
+Classifier: Intended Audience :: Science/Research
+Classifier: Programming Language :: Python
+Classifier: Programming Language :: Python :: 3
+Classifier: Programming Language :: Python :: 3.13
+Classifier: Natural Language :: English
+Classifier: Operating System :: POSIX
+Requires-Python: >=3.13
+Description-Content-Type: text/markdown
+License-File: LICENSE
+Requires-Dist: pz-rail-base>=2.0
+Requires-Dist: plotly
+Requires-Dist: click
+Requires-Dist: dash[ag-grid]
+Requires-Dist: pz-rail-svc[all]
+Requires-Dist: qp-prob[full]
+Provides-Extra: dev
+Requires-Dist: coverage; extra == "dev"
+Requires-Dist: pytest; extra == "dev"
+Requires-Dist: pytest-cov; extra == "dev"
+Requires-Dist: ruff; extra == "dev"
+Requires-Dist: mypy; extra == "dev"
+Requires-Dist: pylint; extra == "dev"
+Requires-Dist: pre-commit; extra == "dev"
+Provides-Extra: docs
+Requires-Dist: nbsphinx; extra == "docs"
+Requires-Dist: sphinx; extra == "docs"
+Requires-Dist: sphinx-autodoc-typehints; extra == "docs"
+Requires-Dist: sphinx_rtd_theme; extra == "docs"
+Requires-Dist: sphinx-autoapi; extra == "docs"
+Requires-Dist: sphinx-tabs; extra == "docs"
+Requires-Dist: sphinx-click; extra == "docs"
+Dynamic: license-file
+
+# live-rail
+
+Unified dashboard for RAIL photometric redshift estimation catalog management and visualization.
+
+## Overview
+
+`live-rail` provides a multi-page Dash web application for:
+
+- **CRUD management** of photo-z catalog entities (algorithms, bands, catalog tags, datasets, models, estimators, estimates)
+- **Estimation workflows** — run photo-z PDF estimation, ensemble estimation, and full dataset estimation
+- **Interactive visualization** — single-catalog and multi-catalog photometric spectrum, color-color diagrams, and redshift PDF comparison
+
+All backed by the `pz-rail-svc` package, supporting both local SQLite database access and remote FastAPI server access.
+
+## Installation
+
+```bash
+pip install -e '.[dev]'
+```
+
+## Quick Start
+
+```bash
+
+# Download data set set up local SQLite DB
+python scripts/setup_pzdc.py
+
+# Launch the dashboard (uses local SQLite DB)
+live-rail dashboard --backend local --db-url "sqlite+aiosqlite:///rail_svc.db"
+
+# With RAIL catalog config for live estimators
+live-rail dashboard --catalog-yaml nb/sandbox_catalogs.yaml
+
+# Connect to a remote rail_svc server
+live-rail dashboard --backend remote --server-url http://localhost:8000
+```
+
+Then open http://127.0.0.1:8050 in your browser.
+
+## Features
+
+### CRUD Tables
+- AG Grid tables with sorting, filtering, and pagination
+- Click entity names to see full details in a popup
+- Click FK columns (model_id, dataset_id, etc.) to see the referenced entity
+- Create and delete entities via modal forms
+
+### Visualizers
+- **Single Catalog**: Photometric spectrum, color-color diagram (all adjacent pairs), and redshift PDF estimates for any object in a dataset
+- **Multi Catalog**: Same layout comparing across component catalogs in a matched (collection) dataset
+- Navigate objects with slider or back/next buttons
+- Pre-computed and live estimator PDFs with true redshift overlay
+
+### Estimation
+- Run photo-z PDF estimation for a single object
+- Run ensemble estimation for an entire catalog
+- Run full dataset estimation (creates estimates record in DB)
+
+## Development
+
+```bash
+# Run unit tests
+pytest
+
+# Run integration tests (requires real DB + data files)
+pytest -m integration
+
+# Lint & format
+ruff check src/ tests/
+ruff format src/ tests/
+
+# Type check
+mypy src/
+
+# Pylint
+pylint src/live_rail/ --rcfile=pyproject.toml
+```
+
+## Project Structure
+
+```
+src/live_rail/
+├── backend/          # BackendProvider — switches between local/remote rail_svc
+├── cli/              # Click CLI (live-rail dashboard)
+├── dashboard/        # Dash multi-page app
+│   ├── pages/crud/   # CRUD pages for each entity
+│   ├── pages/estimation/  # Estimation workflow pages
+│   └── pages/visualizers/ # Interactive visualizer pages
+└── wrappers/         # CatalogWrapper abstractions for data access
+```
+
+## License
+
+MIT