lionagi 0.10.5__tar.gz → 0.10.6__tar.gz

{lionagi-0.10.5 → lionagi-0.10.6}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: lionagi
-Version: 0.10.5
+Version: 0.10.6
 Summary: An Intelligence Operating System.
 Author-email: HaiyangLi <quantocean.li@gmail.com>
 License:            Apache License
@@ -220,7 +220,7 @@ Classifier: Programming Language :: Python :: 3.12
 Classifier: Programming Language :: Python :: 3.13
 Requires-Python: >=3.10
 Requires-Dist: aiocache>=0.12.0
-Requires-Dist: aiohttp>=3.11.0
+Requires-Dist: aiohttp>=3.11.14
 Requires-Dist: jinja2>=3.0.0
 Requires-Dist: pandas>=2.0.0
 Requires-Dist: pillow>=10.0.0

{lionagi-0.10.5 → lionagi-0.10.6}/lionagi/fields/research.py

@@ -16,8 +16,8 @@ class ResearchFinding(HashableModel):
     A single piece of information or insight from the research phase.
     """
 
-    summary: str = Field(
-        ...,
+    summary: str | None = Field(
+        None,
         description="Concise text describing the discovered fact, concept, or best practice.",
     )
     snippets: list[TextSnippet | CodeSnippet] = Field(
@@ -35,8 +35,8 @@ class PotentialRisk(HashableModel):
     Identifies a risk or challenge discovered during research.
     """
 
-    description: str = Field(
-        ...,
+    description: str | None = Field(
+        None,
         description="Short text describing the risk. E.g., 'Scalability concerns with chosen DB'.",
     )
     impact: str | None = Field(

lionagi-0.10.6/lionagi/libs/file/concat.py

@@ -0,0 +1,121 @@
+from pathlib import Path
+from typing import Any
+
+from lionagi.utils import create_path, lcall
+
+from .process import dir_to_files
+
+
+def concat(
+    data_path: str | Path | list,
+    file_types: list[str],
+    output_dir: str | Path = None,
+    output_filename: str = None,
+    file_exist_ok: bool = True,
+    recursive: bool = True,
+    verbose: bool = True,
+    threshold: int = 0,
+    return_fps: bool = False,
+    return_files: bool = False,
+    exclude_patterns: list[str] = None,
+    **kwargs,
+) -> dict[str, Any]:
+    """
+    data_path: str or Path or list of str or Path, the directory or file paths to concatenate.
+    file_types: list of str, the file types to concatenate. [e.g. ['.txt', '.md']]
+    output_dir: str or Path, the directory to save the concatenated file. If provided, will save the file.
+    output_filename: str, the filename to save the concatenated file.
+    file_exist_ok: bool, if True, overwrite the existing file. Default is True.
+    recursive: bool, if True, search files recursively. Default is True.
+    verbose: bool, if True, print the output path. Default is True.
+    threshold: int, the minimum number of chars for the file to be considered valid to concatenate.
+    exclude_patterns: list of str, patterns to exclude files from concatenation (e.g. ['log', 'temp', '.venv']).
+    kwargs: additional keyword arguments to pass to create_path.
+    """
+    persist_path = None
+    if output_dir:
+        if not output_filename:
+            output_filename = "concatenated_text.txt"
+            kwargs["timestamp"] = kwargs.get("timestamp", True)
+            kwargs["random_hash_digits"] = kwargs.get("random_hash_digits", 6)
+        output_filename = output_filename or "concatenated_text.txt"
+        persist_path = create_path(
+            output_dir, output_filename, file_exist_ok=file_exist_ok, **kwargs
+        )
+
+    texts = []
+
+    def _check_existence(_p: str) -> Path | list[Path] | None:
+        if exclude_patterns:
+            _str_p = str(_p)
+            for pattern in exclude_patterns:
+                if pattern in _str_p:
+                    return None
+
+        if not Path(_p).exists():
+            # if the path doesn't exist, return None
+            if verbose:
+                print(f"Path {_p} does not exist, skipping...")
+            return None
+
+        p = Path(_p)
+        if p.is_dir():
+            return dir_to_files(
+                p,
+                recursive=recursive,
+                file_types=file_types,
+                ignore_errors=True,
+                max_workers=5,
+            )
+        if p.is_file():
+            return p
+
+    data_path: list[Path] = lcall(
+        data_path,
+        _check_existence,
+        sanitize_input=True,
+        unique_input=True,
+        flatten=True,
+        dropna=True,
+        unique_output=True,
+        flatten_tuple_set=True,
+    )
+
+    contents = {}
+    fps = []
+    for dp in data_path:
+        try:
+            text = dp.read_text(encoding="utf-8")
+
+        except Exception:
+            # if we cannot read the file, skip it
+            print(f"Could not read file: {dp}. Skipping...")
+            continue
+
+        if threshold > 0 and len(text) < threshold:
+            continue
+
+        fps.append(dp)
+        contents[str(dp)] = text
+
+    for k, text in sorted(contents.items(), key=lambda x: x[0]):
+        texts.extend(["---", k, "---\n", text])
+
+    text = "\n".join(texts)
+    if persist_path:
+        persist_path.write_text(text, encoding="utf-8")
+    if verbose:
+        print(
+            f"Concatenated {len(fps)} files to {persist_path}."
+            f" The file contains {len(text)} characters."
+        )
+
+    out = {"text": text}  # default output
+    if persist_path:
+        out["persist_path"] = persist_path
+    if return_files:
+        out["texts"] = texts
+    if return_fps:
+        out["fps"] = fps
+
+    return out

{lionagi-0.10.5 → lionagi-0.10.6}/lionagi/libs/file/process.py

@@ -203,7 +203,7 @@ def chunk(
             )
 
         if reader_tool is None:
-            reader_tool = lambda x: x.read_text(encoding="utf-8")
+            reader_tool = lambda x: Path(x).read_text(encoding="utf-8")
 
         if reader_tool == "docling":
             from lionagi.libs.package.imports import check_import

lionagi-0.10.6/lionagi/version.py

@@ -0,0 +1 @@
+__version__ = "0.10.6"

{lionagi-0.10.5 → lionagi-0.10.6}/pyproject.toml

@@ -1,6 +1,6 @@
 [project]
 name = "lionagi"
-version = "0.10.5"
+version = "0.10.6"
 description = "An Intelligence Operating System."
 authors = [
     { name = "HaiyangLi", email = "quantocean.li@gmail.com" },
@@ -9,7 +9,7 @@ readme = "README.md"
 requires-python = ">=3.10"
 dependencies = [
     "aiocache>=0.12.0",
-    "aiohttp>=3.11.0",
+    "aiohttp>=3.11.14",
     "jinja2>=3.0.0",
     "pandas>=2.0.0",
     "pillow>=10.0.0",

lionagi-0.10.6/scripts/README.md

@@ -0,0 +1,15 @@
+to run codebase concation and compression
+
+1. ensure you have `uv` installed in your environment. You can install it using
+   pip:
+   ```bash
+   pip install uv
+   ```
+2. the scipt use `OpenRouter` to conduct compression, you need to have
+   `OPENROUTER_API_KEY` set in your `.env`. You can get it from
+   [OpenRouter](https://openrouter.ai/).
+
+3. install the required dependencies
+   ```bash
+   uv run scripts/concat.py
+   ```

lionagi-0.10.6/scripts/concat.py

@@ -0,0 +1,95 @@
+from datetime import datetime
+
+from config import compress, compress_prefix, compression_iterations, config
+
+from lionagi.libs.file.concat import concat
+
+
+async def to_txt(config=config):
+    if not str(config["dir"]).endswith("/"):
+        config["dir"] = str(config["dir"]) + "/"
+
+    fps = []
+    if config["crates"]:
+        for j in config["crates"]:
+            if str(j).startswith("/"):
+                fps.append(config["dir"] + str(j[1:]))
+            else:
+                fps.append(config["dir"] + str(j))
+
+    dt = datetime.now().strftime("%Y%m%d")
+    prefix = config.get("prefix")
+    postfix = config.get("postfix")
+
+    pre_fx = prefix + "_" if prefix else ""
+    post_fix = "_" + postfix if postfix else ""
+    filename = config["output_dir"] + "/" + f"{pre_fx}{dt}{post_fix}.txt"
+
+    filenames = [filename]
+    if compression_iterations:
+        for i in range(1, compression_iterations + 1):
+            filenames.append(
+                config["output_dir"]
+                + "/"
+                + f"{compress_prefix}{pre_fx}{dt}{post_fix}_compressed_{i}.txt"
+            )
+    out = concat(
+        data_path=fps,
+        file_types=config["file_types"],  # File types to include
+        output_dir=config["output_dir"],  # Output directory
+        output_filename=filenames[0],
+        exclude_patterns=config["exclude_patterns"],
+        verbose=True,
+        threshold=200,
+        return_files=True,  # Return the list of files processed
+        return_fps=True,  # Return the file paths used for concatenation
+    )
+    out["output_filenames"] = filenames  # Add the filenames used for
+    if not compress or not len(filenames) > 1:
+        return out
+
+    from lionagi import iModel
+    from lionagi.libs.token_transform.symbolic_compress_context import (
+        symbolic_compress_context,
+    )
+    from lionagi.libs.token_transform.types import TokenMappingTemplate
+
+    chat_model = iModel(
+        model="openrouter/google/gemini-2.0-flash-001",
+        limit_requests=20,
+        limit_tokens=30_000,
+    )
+    compressed_outs = []
+    prev_file = filenames[0]
+    for i in filenames[1:]:
+        nxt_file = i
+        compressed = await symbolic_compress_context(
+            url_or_path=prev_file,  # The text to compress
+            encode_token_map=TokenMappingTemplate.LION_EMOJI,
+            output_path=nxt_file,
+            chat_model=chat_model,
+        )
+        compressed_outs.append(compressed)
+        prev_file = nxt_file
+
+    out["comressed_files"] = compressed_outs  # Store the compressed files
+    return out
+
+
+if __name__ == "__main__":
+    import asyncio
+
+    async def main():
+        out = await to_txt()
+        print("Concatenation and compression completed.")
+
+        for idx, item in enumerate(out["output_filenames"]):
+            print("Compressed files:")
+            if idx > 20:
+                print(
+                    f"Skipping printing more than 20 filenames for brevity. There are {len(out['output_filenames'])} total."
+                )
+                break
+            print(f"{idx + 1}: {item}")
+
+    asyncio.run(main())

lionagi-0.10.6/scripts/config.py

@@ -0,0 +1,18 @@
+prefix = "full"
+postfix = "source_codes"
+crates = ["lionagi"]
+
+compress_prefix = ""
+compress = True
+compress_cumulative = False
+compression_iterations = 1
+
+config = {
+    "dir": "/Users/lion/lionagi/",
+    "output_dir": "/Users/lion/lionagi/dev/data/lionagi",
+    "prefix": prefix,
+    "postfix": postfix,
+    "crates": crates,
+    "exclude_patterns": [".venv"],
+    "file_types": [".py"],
+}

{lionagi-0.10.5 → lionagi-0.10.6}/uv.lock

@@ -38,7 +38,7 @@ wheels = [
 
 [[package]]
 name = "aiohttp"
-version = "3.11.13"
+version = "3.11.16"
 source = { registry = "https://pypi.org/simple" }
 dependencies = [
     { name = "aiohappyeyeballs" },
@@ -50,72 +50,72 @@ dependencies = [
     { name = "propcache" },
     { name = "yarl" },
 ]
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 [[package]]
@@ -1165,7 +1165,7 @@ wheels = [
 
 [[package]]
 name = "lionagi"
-version = "0.10.5"
+version = "0.10.6"
 source = { editable = "." }
 dependencies = [
     { name = "aiocache" },
@@ -1209,7 +1209,7 @@ dev = [
 [package.metadata]
 requires-dist = [
     { name = "aiocache", specifier = ">=0.12.0" },
-    { name = "aiohttp", specifier = ">=3.11.0" },
+    { name = "aiohttp", specifier = ">=3.11.14" },
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     { name = "jinja2", specifier = ">=3.0.0" },
     { name = "litellm", marker = "extra == 'llms'", specifier = ">=1.59.5" },

lionagi-0.10.5/lionagi/version.py

@@ -1 +0,0 @@
-__version__ = "0.10.5"