linkml 1.5.8__tar.gz → 1.6.0__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (131) hide show
  1. {linkml-1.5.8 → linkml-1.6.0}/PKG-INFO +3 -3
  2. linkml-1.6.0/linkml/generators/owlgen.py +992 -0
  3. linkml-1.6.0/linkml/workspaces/datamodel/__init__.py +0 -0
  4. {linkml-1.5.8 → linkml-1.6.0}/pyproject.toml +3 -3
  5. {linkml-1.5.8 → linkml-1.6.0}/setup.py +4 -3
  6. linkml-1.5.8/linkml/generators/owlgen.py +0 -709
  7. {linkml-1.5.8 → linkml-1.6.0}/LICENSE +0 -0
  8. {linkml-1.5.8 → linkml-1.6.0}/README.md +0 -0
  9. {linkml-1.5.8 → linkml-1.6.0}/linkml/__init__.py +0 -0
  10. {linkml-1.5.8 → linkml-1.6.0}/linkml/_version.py +0 -0
  11. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/PythonGenNotes.md +0 -0
  12. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/README.md +0 -0
  13. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/__init__.py +0 -0
  14. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/common/__init__.py +0 -0
  15. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/common/type_designators.py +0 -0
  16. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/csvgen.py +0 -0
  17. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/docgen/class.md.jinja2 +0 -0
  18. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/docgen/class_diagram.md.jinja2 +0 -0
  19. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/docgen/common_metadata.md.jinja2 +0 -0
  20. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/docgen/enum.md.jinja2 +0 -0
  21. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/docgen/index.md.jinja2 +0 -0
  22. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/docgen/index.tex.jinja2 +0 -0
  23. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/docgen/schema.md.jinja2 +0 -0
  24. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/docgen/slot.md.jinja2 +0 -0
  25. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/docgen/subset.md.jinja2 +0 -0
  26. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/docgen/type.md.jinja2 +0 -0
  27. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/docgen.py +0 -0
  28. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/dotgen.py +0 -0
  29. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/erdiagramgen.py +0 -0
  30. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/excelgen.py +0 -0
  31. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/golanggen.py +0 -0
  32. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/golrgen.py +0 -0
  33. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/graphqlgen.py +0 -0
  34. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/javagen/example_template.java.jinja2 +0 -0
  35. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/javagen/java_record_template.jinja2 +0 -0
  36. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/javagen.py +0 -0
  37. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/jsonldcontextgen.py +0 -0
  38. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/jsonldgen.py +0 -0
  39. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/jsonschemagen.py +0 -0
  40. {linkml-1.5.8/linkml/linter → linkml-1.6.0/linkml/generators/legacy}/__init__.py +0 -0
  41. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/linkmlgen.py +0 -0
  42. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/markdowngen.py +0 -0
  43. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/namespacegen.py +0 -0
  44. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/oocodegen.py +0 -0
  45. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/plantumlgen.py +0 -0
  46. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/prefixmapgen.py +0 -0
  47. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/projectgen.py +0 -0
  48. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/protogen.py +0 -0
  49. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/pydanticgen.py +0 -0
  50. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/pythongen.py +0 -0
  51. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/rdfgen.py +0 -0
  52. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/shaclgen.py +0 -0
  53. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/shexgen.py +0 -0
  54. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/sparqlgen.py +0 -0
  55. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/sqlalchemy/__init__.py +0 -0
  56. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/sqlalchemy/sqlalchemy_declarative_template.py +0 -0
  57. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/sqlalchemy/sqlalchemy_imperative_template.py +0 -0
  58. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/sqlalchemygen.py +0 -0
  59. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/sqlddlgen.py +0 -0
  60. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/sqltablegen.py +0 -0
  61. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/sssomgen.py +0 -0
  62. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/string_template.md +0 -0
  63. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/summarygen.py +0 -0
  64. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/terminusdbgen.py +0 -0
  65. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/typescriptgen.py +0 -0
  66. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/yamlgen.py +0 -0
  67. {linkml-1.5.8 → linkml-1.6.0}/linkml/generators/yumlgen.py +0 -0
  68. {linkml-1.5.8/linkml/linter/config/datamodel → linkml-1.6.0/linkml/linter}/__init__.py +0 -0
  69. {linkml-1.5.8 → linkml-1.6.0}/linkml/linter/cli.py +0 -0
  70. {linkml-1.5.8 → linkml-1.6.0}/linkml/linter/config/datamodel/.linkmllint.yaml +0 -0
  71. {linkml-1.5.8/linkml/transformers → linkml-1.6.0/linkml/linter/config/datamodel}/__init__.py +0 -0
  72. {linkml-1.5.8 → linkml-1.6.0}/linkml/linter/config/datamodel/config.py +0 -0
  73. {linkml-1.5.8 → linkml-1.6.0}/linkml/linter/config/datamodel/config.yaml +0 -0
  74. {linkml-1.5.8 → linkml-1.6.0}/linkml/linter/config/default.yaml +0 -0
  75. {linkml-1.5.8 → linkml-1.6.0}/linkml/linter/config/recommended.yaml +0 -0
  76. {linkml-1.5.8 → linkml-1.6.0}/linkml/linter/formatters/__init__.py +0 -0
  77. {linkml-1.5.8 → linkml-1.6.0}/linkml/linter/formatters/formatter.py +0 -0
  78. {linkml-1.5.8 → linkml-1.6.0}/linkml/linter/formatters/json_formatter.py +0 -0
  79. {linkml-1.5.8 → linkml-1.6.0}/linkml/linter/formatters/markdown_formatter.py +0 -0
  80. {linkml-1.5.8 → linkml-1.6.0}/linkml/linter/formatters/terminal_formatter.py +0 -0
  81. {linkml-1.5.8 → linkml-1.6.0}/linkml/linter/formatters/tsv_formatter.py +0 -0
  82. {linkml-1.5.8 → linkml-1.6.0}/linkml/linter/linter.py +0 -0
  83. {linkml-1.5.8 → linkml-1.6.0}/linkml/linter/rules.py +0 -0
  84. {linkml-1.5.8 → linkml-1.6.0}/linkml/reporting/__init__.py +0 -0
  85. {linkml-1.5.8 → linkml-1.6.0}/linkml/reporting/model.py +0 -0
  86. {linkml-1.5.8/linkml/utils → linkml-1.6.0/linkml/transformers}/__init__.py +0 -0
  87. {linkml-1.5.8 → linkml-1.6.0}/linkml/transformers/logical_model_transformer.py +0 -0
  88. {linkml-1.5.8 → linkml-1.6.0}/linkml/transformers/model_transformer.py +0 -0
  89. {linkml-1.5.8 → linkml-1.6.0}/linkml/transformers/relmodel_transformer.py +0 -0
  90. {linkml-1.5.8 → linkml-1.6.0}/linkml/transformers/schema_renamer.py +0 -0
  91. {linkml-1.5.8/linkml/workspaces → linkml-1.6.0/linkml/utils}/__init__.py +0 -0
  92. {linkml-1.5.8 → linkml-1.6.0}/linkml/utils/converter.py +0 -0
  93. {linkml-1.5.8 → linkml-1.6.0}/linkml/utils/datautils.py +0 -0
  94. {linkml-1.5.8 → linkml-1.6.0}/linkml/utils/datavalidator.py +0 -0
  95. {linkml-1.5.8 → linkml-1.6.0}/linkml/utils/execute_tutorial.py +0 -0
  96. {linkml-1.5.8 → linkml-1.6.0}/linkml/utils/generator.py +0 -0
  97. {linkml-1.5.8 → linkml-1.6.0}/linkml/utils/helpers.py +0 -0
  98. {linkml-1.5.8 → linkml-1.6.0}/linkml/utils/ifabsent_functions.py +0 -0
  99. {linkml-1.5.8 → linkml-1.6.0}/linkml/utils/logictools.py +0 -0
  100. {linkml-1.5.8 → linkml-1.6.0}/linkml/utils/mergeutils.py +0 -0
  101. {linkml-1.5.8 → linkml-1.6.0}/linkml/utils/rawloader.py +0 -0
  102. {linkml-1.5.8 → linkml-1.6.0}/linkml/utils/schema_builder.py +0 -0
  103. {linkml-1.5.8 → linkml-1.6.0}/linkml/utils/schema_fixer.py +0 -0
  104. {linkml-1.5.8 → linkml-1.6.0}/linkml/utils/schemaloader.py +0 -0
  105. {linkml-1.5.8 → linkml-1.6.0}/linkml/utils/schemasynopsis.py +0 -0
  106. {linkml-1.5.8 → linkml-1.6.0}/linkml/utils/sqlutils.py +0 -0
  107. {linkml-1.5.8 → linkml-1.6.0}/linkml/utils/typereferences.py +0 -0
  108. {linkml-1.5.8 → linkml-1.6.0}/linkml/utils/validation.py +0 -0
  109. {linkml-1.5.8 → linkml-1.6.0}/linkml/validator/__init__.py +0 -0
  110. {linkml-1.5.8 → linkml-1.6.0}/linkml/validator/cli.py +0 -0
  111. {linkml-1.5.8 → linkml-1.6.0}/linkml/validator/loaders/__init__.py +0 -0
  112. {linkml-1.5.8 → linkml-1.6.0}/linkml/validator/loaders/delimited_file_loader.py +0 -0
  113. {linkml-1.5.8 → linkml-1.6.0}/linkml/validator/loaders/json_loader.py +0 -0
  114. {linkml-1.5.8 → linkml-1.6.0}/linkml/validator/loaders/loader.py +0 -0
  115. {linkml-1.5.8 → linkml-1.6.0}/linkml/validator/loaders/passthrough_loader.py +0 -0
  116. {linkml-1.5.8 → linkml-1.6.0}/linkml/validator/loaders/yaml_loader.py +0 -0
  117. {linkml-1.5.8 → linkml-1.6.0}/linkml/validator/plugins/__init__.py +0 -0
  118. {linkml-1.5.8 → linkml-1.6.0}/linkml/validator/plugins/jsonschema_validation_plugin.py +0 -0
  119. {linkml-1.5.8 → linkml-1.6.0}/linkml/validator/plugins/pydantic_validation_plugin.py +0 -0
  120. {linkml-1.5.8 → linkml-1.6.0}/linkml/validator/plugins/recommended_slots_plugin.py +0 -0
  121. {linkml-1.5.8 → linkml-1.6.0}/linkml/validator/plugins/validation_plugin.py +0 -0
  122. {linkml-1.5.8 → linkml-1.6.0}/linkml/validator/report.py +0 -0
  123. {linkml-1.5.8 → linkml-1.6.0}/linkml/validator/validation_context.py +0 -0
  124. {linkml-1.5.8 → linkml-1.6.0}/linkml/validator/validator.py +0 -0
  125. {linkml-1.5.8 → linkml-1.6.0}/linkml/validators/__init__.py +0 -0
  126. {linkml-1.5.8 → linkml-1.6.0}/linkml/validators/jsonschemavalidator.py +0 -0
  127. {linkml-1.5.8 → linkml-1.6.0}/linkml/validators/sparqlvalidator.py +0 -0
  128. {linkml-1.5.8/linkml/workspaces/datamodel → linkml-1.6.0/linkml/workspaces}/__init__.py +0 -0
  129. {linkml-1.5.8 → linkml-1.6.0}/linkml/workspaces/datamodel/workspaces.py +0 -0
  130. {linkml-1.5.8 → linkml-1.6.0}/linkml/workspaces/datamodel/workspaces.yaml +0 -0
  131. {linkml-1.5.8 → linkml-1.6.0}/linkml/workspaces/example_runner.py +0 -0
{linkml-1.5.8 → linkml-1.6.0}/PKG-INFO RENAMED
@@ -1,12 +1,12 @@
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  Metadata-Version: 2.1
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  Name: linkml
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- Version: 1.5.8
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+ Version: 1.6.0
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  Summary: Linked Open Data Modeling Language
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  Home-page: https://linkml.io/linkml/
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  Keywords: schema,linked data,data modeling,rdf,owl,biolink
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  Author: Chris Mungall
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  Author-email: cjmungall@lbl.gov
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- Requires-Python: >=3.7.6,<4.0.0
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+ Requires-Python: >=3.8,<4.0
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  Classifier: Development Status :: 5 - Production/Stable
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  Classifier: Environment :: Console
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  Classifier: Intended Audience :: Developers
@@ -33,7 +33,7 @@ Requires-Dist: jinja2 (>=3.1.0)
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  Requires-Dist: jsonasobj2 (>=1.0.3,<2.0.0)
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  Requires-Dist: jsonschema[format] (>=4.0.0)
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  Requires-Dist: linkml-dataops
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- Requires-Dist: linkml-runtime (>=1.5.7,<2.0.0)
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+ Requires-Dist: linkml-runtime (>=1.6.0)
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  Requires-Dist: openpyxl
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  Requires-Dist: parse
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  Requires-Dist: prefixcommons (>=0.1.7)