legend-pydataobj 1.6.1__tar.gz → 1.6.2__tar.gz

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Files changed (90) hide show
  1. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/PKG-INFO +1 -1
  2. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/legend_pydataobj.egg-info/PKG-INFO +1 -1
  3. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/_version.py +2 -2
  4. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/lh5/_serializers/write/array.py +1 -1
  5. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/lh5/datatype.py +2 -2
  6. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/tests/lh5/conftest.py +1 -0
  7. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/tests/lh5/test_lh5_store.py +5 -0
  8. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/LICENSE +0 -0
  9. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/README.md +0 -0
  10. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/pyproject.toml +0 -0
  11. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/setup.cfg +0 -0
  12. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/legend_pydataobj.egg-info/SOURCES.txt +0 -0
  13. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/legend_pydataobj.egg-info/dependency_links.txt +0 -0
  14. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/legend_pydataobj.egg-info/entry_points.txt +0 -0
  15. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/legend_pydataobj.egg-info/not-zip-safe +0 -0
  16. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/legend_pydataobj.egg-info/requires.txt +0 -0
  17. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/legend_pydataobj.egg-info/top_level.txt +0 -0
  18. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/__init__.py +0 -0
  19. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/cli.py +0 -0
  20. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/compression/__init__.py +0 -0
  21. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/compression/base.py +0 -0
  22. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/compression/generic.py +0 -0
  23. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/compression/radware.py +0 -0
  24. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/compression/utils.py +0 -0
  25. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/compression/varlen.py +0 -0
  26. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/lgdo_utils.py +0 -0
  27. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/lh5/__init__.py +0 -0
  28. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/lh5/_serializers/__init__.py +0 -0
  29. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/lh5/_serializers/read/__init__.py +0 -0
  30. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/lh5/_serializers/read/array.py +0 -0
  31. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/lh5/_serializers/read/composite.py +0 -0
  32. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/lh5/_serializers/read/encoded.py +0 -0
  33. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/lh5/_serializers/read/ndarray.py +0 -0
  34. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/lh5/_serializers/read/scalar.py +0 -0
  35. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/lh5/_serializers/read/utils.py +0 -0
  36. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/lh5/_serializers/read/vector_of_vectors.py +0 -0
  37. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/lh5/_serializers/write/__init__.py +0 -0
  38. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/lh5/_serializers/write/composite.py +0 -0
  39. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/lh5/_serializers/write/scalar.py +0 -0
  40. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/lh5/_serializers/write/vector_of_vectors.py +0 -0
  41. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/lh5/core.py +0 -0
  42. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/lh5/exceptions.py +0 -0
  43. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/lh5/iterator.py +0 -0
  44. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/lh5/store.py +0 -0
  45. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/lh5/tools.py +0 -0
  46. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/lh5/utils.py +0 -0
  47. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/lh5_store.py +0 -0
  48. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/logging.py +0 -0
  49. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/types/__init__.py +0 -0
  50. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/types/array.py +0 -0
  51. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/types/arrayofequalsizedarrays.py +0 -0
  52. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/types/encoded.py +0 -0
  53. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/types/fixedsizearray.py +0 -0
  54. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/types/lgdo.py +0 -0
  55. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/types/scalar.py +0 -0
  56. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/types/struct.py +0 -0
  57. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/types/table.py +0 -0
  58. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/types/vectorofvectors.py +0 -0
  59. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/types/vovutils.py +0 -0
  60. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/types/waveformtable.py +0 -0
  61. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/units.py +0 -0
  62. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/utils.py +0 -0
  63. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/tests/compression/conftest.py +0 -0
  64. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/tests/compression/sigcompress/LDQTA_r117_20200110T105115Z_cal_geds_raw-0.dat +0 -0
  65. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/tests/compression/sigcompress/special-wf-clipped.dat +0 -0
  66. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/tests/compression/test_compression.py +0 -0
  67. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/tests/compression/test_radware_sigcompress.py +0 -0
  68. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/tests/compression/test_str2wfcodec.py +0 -0
  69. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/tests/compression/test_uleb128_zigzag_diff.py +0 -0
  70. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/tests/conftest.py +0 -0
  71. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/tests/lh5/test_core.py +0 -0
  72. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/tests/lh5/test_lh5_datatype.py +0 -0
  73. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/tests/lh5/test_lh5_iterator.py +0 -0
  74. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/tests/lh5/test_lh5_tools.py +0 -0
  75. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/tests/lh5/test_lh5_utils.py +0 -0
  76. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/tests/lh5/test_lh5_write.py +0 -0
  77. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/tests/test_cli.py +0 -0
  78. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/tests/test_lgdo_utils.py +0 -0
  79. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/tests/types/test_array.py +0 -0
  80. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/tests/types/test_arrayofequalsizedarrays.py +0 -0
  81. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/tests/types/test_encoded.py +0 -0
  82. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/tests/types/test_fixedsizearray.py +0 -0
  83. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/tests/types/test_representations.py +0 -0
  84. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/tests/types/test_scalar.py +0 -0
  85. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/tests/types/test_struct.py +0 -0
  86. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/tests/types/test_table.py +0 -0
  87. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/tests/types/test_table_eval.py +0 -0
  88. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/tests/types/test_vectorofvectors.py +0 -0
  89. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/tests/types/test_vovutils.py +0 -0
  90. {legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/tests/types/test_waveformtable.py +0 -0
{legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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1
  Metadata-Version: 2.1
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  Name: legend_pydataobj
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- Version: 1.6.1
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+ Version: 1.6.2
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  Summary: LEGEND Python Data Objects
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  Author: The LEGEND Collaboration
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  Maintainer: The LEGEND Collaboration
{legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/legend_pydataobj.egg-info/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
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  Name: legend_pydataobj
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- Version: 1.6.1
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+ Version: 1.6.2
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  Summary: LEGEND Python Data Objects
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  Author: The LEGEND Collaboration
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  Maintainer: The LEGEND Collaboration
{legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/_version.py RENAMED
@@ -12,5 +12,5 @@ __version__: str
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  __version_tuple__: VERSION_TUPLE
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  version_tuple: VERSION_TUPLE
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14
 
15
- __version__ = version = '1.6.1'
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- __version_tuple__ = version_tuple = (1, 6, 1)
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+ __version__ = version = '1.6.2'
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+ __version_tuple__ = version_tuple = (1, 6, 2)
{legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/lh5/_serializers/write/array.py RENAMED
@@ -10,7 +10,7 @@ from ...exceptions import LH5EncodeError
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10
 
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  log = logging.getLogger(__name__)
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- DEFAULT_HDF5_SETTINGS: dict[str, ...] = {"shuffle": True, "compression": "gzip"}
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+ DEFAULT_HDF5_SETTINGS: dict[str, ...] = {"shuffle": True, "compression": "lzf"}
14
14
 
15
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16
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  def _h5_write_array(
{legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/src/lgdo/lh5/datatype.py RENAMED
@@ -16,9 +16,9 @@ _lgdo_datatype_map: dict[str, lgdo.LGDO] = OrderedDict(
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  ),
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  (lgdo.Struct, r"^struct\{.*\}$"),
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  (lgdo.Table, r"^table\{.*\}$"),
19
- (lgdo.FixedSizeArray, r"^fixedsize_array<1>\{.+\}$"),
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+ (lgdo.FixedSizeArray, r"^fixedsize_array<\d+>\{.+\}$"),
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  (lgdo.ArrayOfEqualSizedArrays, r"^array_of_equalsized_arrays<1,1>\{.+\}$"),
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- (lgdo.Array, r"^array<1>\{.+\}$"),
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+ (lgdo.Array, r"^array<\d+>\{.+\}$"),
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  ]
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  )
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  """Mapping between LGDO types and regular expression defining the corresponding datatype string"""
{legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/tests/lh5/conftest.py RENAMED
@@ -19,6 +19,7 @@ def lh5_file(tmptestdir):
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  struct = lgdo.Struct()
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  struct.add_field("scalar", lgdo.Scalar(value=10, attrs={"sth": 1}))
21
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  struct.add_field("array", types.Array(nda=np.array([1, 2, 3, 4, 5])))
22
+ struct.add_field("array2d", types.Array(shape=(23, 56), fill_val=69, dtype=int))
22
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  struct.add_field(
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24
  "aoesa",
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  types.ArrayOfEqualSizedArrays(shape=(5, 5), dtype=np.float32, fill_val=42),
{legend_pydataobj-1.6.1 → legend_pydataobj-1.6.2}/tests/lh5/test_lh5_store.py RENAMED
@@ -84,6 +84,10 @@ def test_read_array(lh5_file):
84
84
  is DEFAULT_HDF5_SETTINGS["compression"]
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85
  )
86
86
 
87
+ lh5_obj, n_rows = store.read("/data/struct_full/array2d", lh5_file)
88
+ assert isinstance(lh5_obj, types.Array)
89
+ assert lh5_obj == types.Array(shape=(23, 56), fill_val=69, dtype=int)
90
+
87
91
 
88
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  def test_read_array_slice(lh5_file):
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93
  store = lh5.LH5Store()
@@ -351,6 +355,7 @@ def test_read_with_field_mask(lh5_file):
351
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  assert sorted(lh5_obj.keys()) == [
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  "aoesa",
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  "array",
358
+ "array2d",
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  "empty_struct",
355
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  "scalar",
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  "table",