legend-pydataobj 1.11.0__tar.gz → 1.11.1__tar.gz

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Files changed (92) hide show
  1. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/PKG-INFO +1 -1
  2. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/legend_pydataobj.egg-info/PKG-INFO +1 -1
  3. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/_version.py +2 -2
  4. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/utils.py +8 -0
  5. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/tests/test_lgdo_utils.py +5 -0
  6. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/LICENSE +0 -0
  7. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/README.md +0 -0
  8. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/pyproject.toml +0 -0
  9. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/setup.cfg +0 -0
  10. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/legend_pydataobj.egg-info/SOURCES.txt +0 -0
  11. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/legend_pydataobj.egg-info/dependency_links.txt +0 -0
  12. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/legend_pydataobj.egg-info/entry_points.txt +0 -0
  13. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/legend_pydataobj.egg-info/not-zip-safe +0 -0
  14. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/legend_pydataobj.egg-info/requires.txt +0 -0
  15. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/legend_pydataobj.egg-info/top_level.txt +0 -0
  16. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/__init__.py +0 -0
  17. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/cli.py +0 -0
  18. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/compression/__init__.py +0 -0
  19. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/compression/base.py +0 -0
  20. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/compression/generic.py +0 -0
  21. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/compression/radware.py +0 -0
  22. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/compression/utils.py +0 -0
  23. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/compression/varlen.py +0 -0
  24. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/lgdo_utils.py +0 -0
  25. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/lh5/__init__.py +0 -0
  26. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/lh5/_serializers/__init__.py +0 -0
  27. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/lh5/_serializers/read/__init__.py +0 -0
  28. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/lh5/_serializers/read/array.py +0 -0
  29. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/lh5/_serializers/read/composite.py +0 -0
  30. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/lh5/_serializers/read/encoded.py +0 -0
  31. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/lh5/_serializers/read/ndarray.py +0 -0
  32. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/lh5/_serializers/read/scalar.py +0 -0
  33. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/lh5/_serializers/read/utils.py +0 -0
  34. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/lh5/_serializers/read/vector_of_vectors.py +0 -0
  35. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/lh5/_serializers/write/__init__.py +0 -0
  36. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/lh5/_serializers/write/array.py +0 -0
  37. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/lh5/_serializers/write/composite.py +0 -0
  38. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/lh5/_serializers/write/scalar.py +0 -0
  39. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/lh5/_serializers/write/vector_of_vectors.py +0 -0
  40. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/lh5/core.py +0 -0
  41. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/lh5/datatype.py +0 -0
  42. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/lh5/exceptions.py +0 -0
  43. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/lh5/iterator.py +0 -0
  44. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/lh5/store.py +0 -0
  45. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/lh5/tools.py +0 -0
  46. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/lh5/utils.py +0 -0
  47. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/lh5_store.py +0 -0
  48. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/logging.py +0 -0
  49. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/types/__init__.py +0 -0
  50. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/types/array.py +0 -0
  51. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/types/arrayofequalsizedarrays.py +0 -0
  52. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/types/encoded.py +0 -0
  53. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/types/fixedsizearray.py +0 -0
  54. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/types/histogram.py +0 -0
  55. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/types/lgdo.py +0 -0
  56. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/types/scalar.py +0 -0
  57. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/types/struct.py +0 -0
  58. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/types/table.py +0 -0
  59. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/types/vectorofvectors.py +0 -0
  60. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/types/vovutils.py +0 -0
  61. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/types/waveformtable.py +0 -0
  62. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/units.py +0 -0
  63. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/tests/compression/conftest.py +0 -0
  64. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/tests/compression/sigcompress/LDQTA_r117_20200110T105115Z_cal_geds_raw-0.dat +0 -0
  65. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/tests/compression/sigcompress/special-wf-clipped.dat +0 -0
  66. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/tests/compression/test_compression.py +0 -0
  67. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/tests/compression/test_radware_sigcompress.py +0 -0
  68. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/tests/compression/test_str2wfcodec.py +0 -0
  69. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/tests/compression/test_uleb128_zigzag_diff.py +0 -0
  70. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/tests/conftest.py +0 -0
  71. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/tests/lh5/conftest.py +0 -0
  72. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/tests/lh5/test_core.py +0 -0
  73. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/tests/lh5/test_lh5_datatype.py +0 -0
  74. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/tests/lh5/test_lh5_iterator.py +0 -0
  75. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/tests/lh5/test_lh5_store.py +0 -0
  76. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/tests/lh5/test_lh5_tools.py +0 -0
  77. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/tests/lh5/test_lh5_utils.py +0 -0
  78. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/tests/lh5/test_lh5_write.py +0 -0
  79. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/tests/test_cli.py +0 -0
  80. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/tests/types/test_array.py +0 -0
  81. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/tests/types/test_arrayofequalsizedarrays.py +0 -0
  82. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/tests/types/test_encoded.py +0 -0
  83. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/tests/types/test_fixedsizearray.py +0 -0
  84. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/tests/types/test_histogram.py +0 -0
  85. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/tests/types/test_representations.py +0 -0
  86. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/tests/types/test_scalar.py +0 -0
  87. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/tests/types/test_struct.py +0 -0
  88. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/tests/types/test_table.py +0 -0
  89. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/tests/types/test_table_eval.py +0 -0
  90. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/tests/types/test_vectorofvectors.py +0 -0
  91. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/tests/types/test_vovutils.py +0 -0
  92. {legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/tests/types/test_waveformtable.py +0 -0
{legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: legend_pydataobj
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- Version: 1.11.0
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+ Version: 1.11.1
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  Summary: LEGEND Python Data Objects
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  Author: The LEGEND Collaboration
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  Maintainer: The LEGEND Collaboration
{legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/legend_pydataobj.egg-info/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: legend_pydataobj
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- Version: 1.11.0
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+ Version: 1.11.1
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  Summary: LEGEND Python Data Objects
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  Author: The LEGEND Collaboration
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  Maintainer: The LEGEND Collaboration
{legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/_version.py RENAMED
@@ -12,5 +12,5 @@ __version__: str
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  __version_tuple__: VERSION_TUPLE
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  version_tuple: VERSION_TUPLE
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- __version__ = version = '1.11.0'
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- __version_tuple__ = version_tuple = (1, 11, 0)
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+ __version__ = version = '1.11.1'
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+ __version_tuple__ = version_tuple = (1, 11, 1)
{legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/src/lgdo/utils.py RENAMED
@@ -49,6 +49,14 @@ def get_element_type(obj: object) -> str:
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  return "complex"
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  if kind in ["S", "U"]:
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  return "string"
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+ if (
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+ kind == "O"
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+ and dt.metadata is not None
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+ and dt.metadata.get("vlen", None) in (str, bytes)
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+ ):
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+ # variable length strings in HDF5 are read as numpy object arrays in h5py.
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+ # see also h5py.check_vlen_dtype.
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+ return "string"
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53
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  # couldn't figure it out
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  msg = "cannot determine lgdo element_type for object of type"
{legend_pydataobj-1.11.0 → legend_pydataobj-1.11.1}/tests/test_lgdo_utils.py RENAMED
@@ -1,11 +1,15 @@
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  from __future__ import annotations
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+ import h5py
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  import numpy as np
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  from lgdo import utils
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8
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  def test_get_element_type():
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+ # variable length HD5 string datatype.
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+ h5py_str_dtype = h5py.string_dtype(encoding="ascii", length=None)
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+
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  objs = [
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  ("hi", "string"),
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  (True, "bool"),
@@ -16,6 +20,7 @@ def test_get_element_type():
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  (1 + 1j, "complex"),
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  (b"hi", "string"),
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  (np.array(["hi"]), "string"),
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+ (np.array([b"hi"], h5py_str_dtype), "string"),
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  ]
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21
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  for obj, name in objs: