legend-dataflow-scripts 0.2.2__tar.gz → 0.2.4__tar.gz

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Files changed (44) hide show
  1. {legend_dataflow_scripts-0.2.2/src/legend_dataflow_scripts.egg-info → legend_dataflow_scripts-0.2.4}/PKG-INFO +1 -1
  2. {legend_dataflow_scripts-0.2.2 → legend_dataflow_scripts-0.2.4/src/legend_dataflow_scripts.egg-info}/PKG-INFO +1 -1
  3. {legend_dataflow_scripts-0.2.2 → legend_dataflow_scripts-0.2.4}/src/legenddataflowscripts/_version.py +3 -3
  4. {legend_dataflow_scripts-0.2.2 → legend_dataflow_scripts-0.2.4}/src/legenddataflowscripts/par/geds/hit/aoe.py +7 -5
  5. {legend_dataflow_scripts-0.2.2 → legend_dataflow_scripts-0.2.4}/src/legenddataflowscripts/par/geds/hit/ecal.py +6 -3
  6. {legend_dataflow_scripts-0.2.2 → legend_dataflow_scripts-0.2.4}/src/legenddataflowscripts/par/geds/hit/lq.py +6 -3
  7. {legend_dataflow_scripts-0.2.2 → legend_dataflow_scripts-0.2.4}/src/legenddataflowscripts/par/geds/hit/qc.py +15 -9
  8. {legend_dataflow_scripts-0.2.2 → legend_dataflow_scripts-0.2.4}/src/legenddataflowscripts/utils/log.py +5 -2
  9. {legend_dataflow_scripts-0.2.2 → legend_dataflow_scripts-0.2.4}/LICENSE +0 -0
  10. {legend_dataflow_scripts-0.2.2 → legend_dataflow_scripts-0.2.4}/README.md +0 -0
  11. {legend_dataflow_scripts-0.2.2 → legend_dataflow_scripts-0.2.4}/pyproject.toml +0 -0
  12. {legend_dataflow_scripts-0.2.2 → legend_dataflow_scripts-0.2.4}/setup.cfg +0 -0
  13. {legend_dataflow_scripts-0.2.2 → legend_dataflow_scripts-0.2.4}/src/legend_dataflow_scripts.egg-info/SOURCES.txt +0 -0
  14. {legend_dataflow_scripts-0.2.2 → legend_dataflow_scripts-0.2.4}/src/legend_dataflow_scripts.egg-info/dependency_links.txt +0 -0
  15. {legend_dataflow_scripts-0.2.2 → legend_dataflow_scripts-0.2.4}/src/legend_dataflow_scripts.egg-info/entry_points.txt +0 -0
  16. {legend_dataflow_scripts-0.2.2 → legend_dataflow_scripts-0.2.4}/src/legend_dataflow_scripts.egg-info/not-zip-safe +0 -0
  17. {legend_dataflow_scripts-0.2.2 → legend_dataflow_scripts-0.2.4}/src/legend_dataflow_scripts.egg-info/requires.txt +0 -0
  18. {legend_dataflow_scripts-0.2.2 → legend_dataflow_scripts-0.2.4}/src/legend_dataflow_scripts.egg-info/top_level.txt +0 -0
  19. {legend_dataflow_scripts-0.2.2 → legend_dataflow_scripts-0.2.4}/src/legenddataflowscripts/__init__.py +0 -0
  20. {legend_dataflow_scripts-0.2.2 → legend_dataflow_scripts-0.2.4}/src/legenddataflowscripts/par/__init__.py +0 -0
  21. {legend_dataflow_scripts-0.2.2 → legend_dataflow_scripts-0.2.4}/src/legenddataflowscripts/par/geds/__init__.py +0 -0
  22. {legend_dataflow_scripts-0.2.2 → legend_dataflow_scripts-0.2.4}/src/legenddataflowscripts/par/geds/dsp/__init__.py +0 -0
  23. {legend_dataflow_scripts-0.2.2 → legend_dataflow_scripts-0.2.4}/src/legenddataflowscripts/par/geds/dsp/dplms.py +0 -0
  24. {legend_dataflow_scripts-0.2.2 → legend_dataflow_scripts-0.2.4}/src/legenddataflowscripts/par/geds/dsp/eopt.py +0 -0
  25. {legend_dataflow_scripts-0.2.2 → legend_dataflow_scripts-0.2.4}/src/legenddataflowscripts/par/geds/dsp/evtsel.py +0 -0
  26. {legend_dataflow_scripts-0.2.2 → legend_dataflow_scripts-0.2.4}/src/legenddataflowscripts/par/geds/dsp/nopt.py +0 -0
  27. {legend_dataflow_scripts-0.2.2 → legend_dataflow_scripts-0.2.4}/src/legenddataflowscripts/par/geds/dsp/pz.py +0 -0
  28. {legend_dataflow_scripts-0.2.2 → legend_dataflow_scripts-0.2.4}/src/legenddataflowscripts/par/geds/dsp/svm.py +0 -0
  29. {legend_dataflow_scripts-0.2.2 → legend_dataflow_scripts-0.2.4}/src/legenddataflowscripts/par/geds/dsp/svm_build.py +0 -0
  30. {legend_dataflow_scripts-0.2.2 → legend_dataflow_scripts-0.2.4}/src/legenddataflowscripts/par/geds/hit/__init__.py +0 -0
  31. {legend_dataflow_scripts-0.2.2 → legend_dataflow_scripts-0.2.4}/src/legenddataflowscripts/tier/__init__.py +0 -0
  32. {legend_dataflow_scripts-0.2.2 → legend_dataflow_scripts-0.2.4}/src/legenddataflowscripts/tier/dsp.py +0 -0
  33. {legend_dataflow_scripts-0.2.2 → legend_dataflow_scripts-0.2.4}/src/legenddataflowscripts/tier/hit.py +0 -0
  34. {legend_dataflow_scripts-0.2.2 → legend_dataflow_scripts-0.2.4}/src/legenddataflowscripts/utils/__init__.py +0 -0
  35. {legend_dataflow_scripts-0.2.2 → legend_dataflow_scripts-0.2.4}/src/legenddataflowscripts/utils/alias_table.py +0 -0
  36. {legend_dataflow_scripts-0.2.2 → legend_dataflow_scripts-0.2.4}/src/legenddataflowscripts/utils/cfgtools.py +0 -0
  37. {legend_dataflow_scripts-0.2.2 → legend_dataflow_scripts-0.2.4}/src/legenddataflowscripts/utils/convert_np.py +0 -0
  38. {legend_dataflow_scripts-0.2.2 → legend_dataflow_scripts-0.2.4}/src/legenddataflowscripts/utils/plot_dict.py +0 -0
  39. {legend_dataflow_scripts-0.2.2 → legend_dataflow_scripts-0.2.4}/src/legenddataflowscripts/utils/pulser_removal.py +0 -0
  40. {legend_dataflow_scripts-0.2.2 → legend_dataflow_scripts-0.2.4}/src/legenddataflowscripts/workflow/__init__.py +0 -0
  41. {legend_dataflow_scripts-0.2.2 → legend_dataflow_scripts-0.2.4}/src/legenddataflowscripts/workflow/execenv.py +0 -0
  42. {legend_dataflow_scripts-0.2.2 → legend_dataflow_scripts-0.2.4}/src/legenddataflowscripts/workflow/filedb.py +0 -0
  43. {legend_dataflow_scripts-0.2.2 → legend_dataflow_scripts-0.2.4}/src/legenddataflowscripts/workflow/pre_compile_catalog.py +0 -0
  44. {legend_dataflow_scripts-0.2.2 → legend_dataflow_scripts-0.2.4}/src/legenddataflowscripts/workflow/utils.py +0 -0
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: legend-dataflow-scripts
3
- Version: 0.2.2
3
+ Version: 0.2.4
4
4
  Summary: Python package for the processing scripts for LEGEND-200 data
5
5
  Author-email: George Marshall <ggmarsh@uw.edu>, Luigi Pertoldi <gipert@pm.me>
6
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  Maintainer: The LEGEND Collaboration
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: legend-dataflow-scripts
3
- Version: 0.2.2
3
+ Version: 0.2.4
4
4
  Summary: Python package for the processing scripts for LEGEND-200 data
5
5
  Author-email: George Marshall <ggmarsh@uw.edu>, Luigi Pertoldi <gipert@pm.me>
6
6
  Maintainer: The LEGEND Collaboration
@@ -28,7 +28,7 @@ version_tuple: VERSION_TUPLE
28
28
  commit_id: COMMIT_ID
29
29
  __commit_id__: COMMIT_ID
30
30
 
31
- __version__ = version = '0.2.2'
32
- __version_tuple__ = version_tuple = (0, 2, 2)
31
+ __version__ = version = '0.2.4'
32
+ __version_tuple__ = version_tuple = (0, 2, 4)
33
33
 
34
- __commit_id__ = commit_id = 'g512d89c35'
34
+ __commit_id__ = commit_id = 'g24654af65'
@@ -251,14 +251,13 @@ def par_geds_hit_aoe() -> None:
251
251
  ]
252
252
 
253
253
  if "dt_param" in kwarg_dict:
254
- params += kwarg_dict["dt_param"]
254
+ params.append(kwarg_dict["dt_param"])
255
255
  else:
256
256
  params.append("dt_eff")
257
257
 
258
258
  if "dt_cut" in kwarg_dict and kwarg_dict["dt_cut"] is not None:
259
259
  cal_dict.update(kwarg_dict["dt_cut"]["cut"])
260
260
  params.append(kwarg_dict["dt_cut"]["out_param"])
261
-
262
261
  # load data in
263
262
  data, threshold_mask = load_data(
264
263
  files,
@@ -271,9 +270,12 @@ def par_geds_hit_aoe() -> None:
271
270
  msg = f"Loaded {len(data)} events"
272
271
  log.info(msg)
273
272
 
274
- mask = get_pulser_mask(
275
- pulser_file=args.pulser_file,
276
- )
273
+ if args.pulser_file is not None:
274
+ mask = get_pulser_mask(
275
+ pulser_file=args.pulser_file,
276
+ )
277
+ else:
278
+ mask = np.zeros(len(threshold_mask), dtype=bool)
277
279
 
278
280
  data["is_pulser"] = mask[threshold_mask]
279
281
 
@@ -532,9 +532,12 @@ def par_geds_hit_ecal() -> None:
532
532
  cal_energy_param="trapTmax",
533
533
  )
534
534
 
535
- mask = get_pulser_mask(
536
- pulser_file=args.pulser_file,
537
- )
535
+ if args.pulser_file is not None:
536
+ mask = get_pulser_mask(
537
+ pulser_file=args.pulser_file,
538
+ )
539
+ else:
540
+ mask = np.zeros(len(threshold_mask), dtype=bool)
538
541
 
539
542
  data["is_pulser"] = mask[threshold_mask]
540
543
 
@@ -288,9 +288,12 @@ def par_geds_hit_lq() -> None:
288
288
  msg = f"Loaded {len(data)} events"
289
289
  log.info(msg)
290
290
 
291
- mask = get_pulser_mask(
292
- pulser_file=args.pulser_file,
293
- )
291
+ if args.pulser_file is not None:
292
+ mask = get_pulser_mask(
293
+ pulser_file=args.pulser_file,
294
+ )
295
+ else:
296
+ mask = np.zeros(len(threshold_mask), dtype=bool)
294
297
 
295
298
  data["is_pulser"] = mask[threshold_mask]
296
299
 
@@ -39,17 +39,18 @@ def build_qc(
39
39
  ):
40
40
  search_name = table_name if table_name[-1] == "/" else table_name + "/"
41
41
 
42
- kwarg_dict_fft = config["fft_fields"]
42
+ kwarg_dict_fft = config.get("fft_fields", None)
43
43
  kwarg_dict_cal = config["cal_fields"]
44
44
 
45
45
  cut_fields = get_keys(
46
46
  [key.replace(search_name, "") for key in ls(cal_files[0], search_name)],
47
47
  kwarg_dict_cal["cut_parameters"],
48
48
  )
49
- cut_fields += get_keys(
50
- [key.replace(search_name, "") for key in ls(cal_files[0], search_name)],
51
- kwarg_dict_fft["cut_parameters"],
52
- )
49
+ if kwarg_dict_fft is not None:
50
+ cut_fields += get_keys(
51
+ [key.replace(search_name, "") for key in ls(cal_files[0], search_name)],
52
+ kwarg_dict_fft["cut_parameters"],
53
+ )
53
54
 
54
55
  if "initial_cal_cuts" in config:
55
56
  init_cal = config["initial_cal_cuts"]
@@ -147,9 +148,12 @@ def build_qc(
147
148
  cal_energy_param="trapTmax",
148
149
  )
149
150
 
150
- mask = get_pulser_mask(
151
- pulser_file=pulser_file,
152
- )
151
+ if pulser_file is not None:
152
+ mask = get_pulser_mask(
153
+ pulser_file=pulser_file,
154
+ )
155
+ else:
156
+ mask = np.zeros(len(threshold_mask), dtype=bool)
153
157
 
154
158
  data["is_pulser"] = mask[threshold_mask]
155
159
 
@@ -289,7 +293,9 @@ def build_qc(
289
293
  def par_geds_hit_qc() -> None:
290
294
  argparser = argparse.ArgumentParser()
291
295
  argparser.add_argument("--cal-files", help="cal_files", nargs="*", type=str)
292
- argparser.add_argument("--fft-files", help="fft_files", nargs="*", type=str)
296
+ argparser.add_argument(
297
+ "--fft-files", help="fft_files", nargs="*", type=str, default=[]
298
+ )
293
299
 
294
300
  argparser.add_argument(
295
301
  "--tcm-filelist", help="tcm_filelist", type=str, required=False
@@ -39,11 +39,14 @@ def build_log(
39
39
  log_file
40
40
  The path to the log file.
41
41
  """
42
- if isinstance(config_dict, str):
42
+ if isinstance(config_dict, str | dict):
43
43
  config_dict = {"options": {"logging": config_dict}}
44
+
44
45
  if "logging" in config_dict["options"]:
45
46
  log_config = config_dict["options"]["logging"]
46
- log_config = Props.read_from(log_config)
47
+ # if it's a str, interpret it as a path to a file
48
+ if isinstance(log_config, str):
49
+ log_config = Props.read_from(log_config)
47
50
 
48
51
  if log_file is not None:
49
52
  Path(log_file).parent.mkdir(parents=True, exist_ok=True)