lede 0.3.0__tar.gz

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  1. lede-0.3.0/.gitignore +53 -0
  2. lede-0.3.0/CHANGELOG.md +327 -0
  3. lede-0.3.0/LICENSE +202 -0
  4. lede-0.3.0/PKG-INFO +505 -0
  5. lede-0.3.0/README.md +272 -0
  6. lede-0.3.0/benchmarks/README.md +66 -0
  7. lede-0.3.0/examples/README.md +35 -0
  8. lede-0.3.0/fixtures/README.md +69 -0
  9. lede-0.3.0/fixtures/tfidf-legacy/README.md +6 -0
  10. lede-0.3.0/packages/lede-spacy/LICENSE +202 -0
  11. lede-0.3.0/packages/lede-spacy/README.md +201 -0
  12. lede-0.3.0/packages/lede-spacy/pyproject.toml +51 -0
  13. lede-0.3.0/packages/lede-spacy/tests/test_spacy_backend.py +196 -0
  14. lede-0.3.0/pyproject.toml +59 -0
  15. lede-0.3.0/rust/tests/brief.rs +120 -0
  16. lede-0.3.0/rust/tests/clean_text.rs +41 -0
  17. lede-0.3.0/rust/tests/cli.rs +110 -0
  18. lede-0.3.0/rust/tests/coverage.rs +57 -0
  19. lede-0.3.0/rust/tests/determinism.rs +85 -0
  20. lede-0.3.0/rust/tests/extract_correlate.rs +87 -0
  21. lede-0.3.0/rust/tests/extract_key_facts.rs +85 -0
  22. lede-0.3.0/rust/tests/extract_metadata.rs +40 -0
  23. lede-0.3.0/rust/tests/extract_outline.rs +163 -0
  24. lede-0.3.0/rust/tests/extract_phrases.rs +67 -0
  25. lede-0.3.0/rust/tests/extract_stats.rs +269 -0
  26. lede-0.3.0/rust/tests/extract_toc.rs +35 -0
  27. lede-0.3.0/rust/tests/fixtures.rs +229 -0
  28. lede-0.3.0/rust/tests/float_parity.rs +41 -0
  29. lede-0.3.0/rust/tests/keyword.rs +82 -0
  30. lede-0.3.0/rust/tests/scorer_v0_2.rs +72 -0
  31. lede-0.3.0/rust/tests/sentences.rs +86 -0
  32. lede-0.3.0/rust/tests/strip_think.rs +33 -0
  33. lede-0.3.0/rust/tests/summaryresult.rs +52 -0
  34. lede-0.3.0/rust/tests/tfidf.rs +104 -0
  35. lede-0.3.0/rust/tests/zero_dep.rs +81 -0
  36. lede-0.3.0/src/lede/__init__.py +28 -0
  37. lede-0.3.0/src/lede/_headings.py +111 -0
  38. lede-0.3.0/src/lede/_parity.py +73 -0
  39. lede-0.3.0/src/lede/_types.py +47 -0
  40. lede-0.3.0/src/lede/brief.py +157 -0
  41. lede-0.3.0/src/lede/clean.py +100 -0
  42. lede-0.3.0/src/lede/cli.py +84 -0
  43. lede-0.3.0/src/lede/coverage.py +108 -0
  44. lede-0.3.0/src/lede/extract/__init__.py +37 -0
  45. lede-0.3.0/src/lede/extract/_backends.py +69 -0
  46. lede-0.3.0/src/lede/extract/_common.py +20 -0
  47. lede-0.3.0/src/lede/extract/_yake.py +78 -0
  48. lede-0.3.0/src/lede/extract/correlate.py +117 -0
  49. lede-0.3.0/src/lede/extract/key_facts.py +135 -0
  50. lede-0.3.0/src/lede/extract/metadata.py +78 -0
  51. lede-0.3.0/src/lede/extract/outline.py +97 -0
  52. lede-0.3.0/src/lede/extract/phrases.py +121 -0
  53. lede-0.3.0/src/lede/extract/stats.py +412 -0
  54. lede-0.3.0/src/lede/keyword.py +79 -0
  55. lede-0.3.0/src/lede/sentences.py +78 -0
  56. lede-0.3.0/src/lede/textrank.py +75 -0
  57. lede-0.3.0/src/lede/tfidf.py +406 -0
  58. lede-0.3.0/tests/__init__.py +0 -0
  59. lede-0.3.0/tests/test_brief.py +105 -0
  60. lede-0.3.0/tests/test_clean.py +86 -0
  61. lede-0.3.0/tests/test_cli.py +75 -0
  62. lede-0.3.0/tests/test_determinism.py +62 -0
  63. lede-0.3.0/tests/test_edge_cases.py +104 -0
  64. lede-0.3.0/tests/test_extract_backends.py +94 -0
  65. lede-0.3.0/tests/test_extract_correlate.py +58 -0
  66. lede-0.3.0/tests/test_extract_key_facts.py +68 -0
  67. lede-0.3.0/tests/test_extract_metadata.py +38 -0
  68. lede-0.3.0/tests/test_extract_outline.py +119 -0
  69. lede-0.3.0/tests/test_extract_phrases.py +108 -0
  70. lede-0.3.0/tests/test_extract_stats.py +216 -0
  71. lede-0.3.0/tests/test_extract_toc.py +23 -0
  72. lede-0.3.0/tests/test_fixtures.py +72 -0
  73. lede-0.3.0/tests/test_keyword.py +65 -0
  74. lede-0.3.0/tests/test_sentences.py +63 -0
  75. lede-0.3.0/tests/test_textrank.py +35 -0
  76. lede-0.3.0/tests/test_tfidf.py +122 -0
  77. lede-0.3.0/tests/test_v0_2_coverage.py +48 -0
  78. lede-0.3.0/tests/test_v0_2_scorer.py +94 -0
  79. lede-0.3.0/tests/test_v0_2_summaryresult.py +94 -0
  80. lede-0.3.0/tests/test_zero_deps.py +58 -0
lede-0.3.0/.gitignore ADDED
@@ -0,0 +1,53 @@
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+ # Python
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+ __pycache__/
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+ *.py[cod]
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+ *.egg-info/
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+ .pytest_cache/
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+ .coverage
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+ build/
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+ dist/
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+ .venv/
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+ venv/
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+
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+ # IDE
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+ .vscode/
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+ .idea/
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+
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+ # Per-developer agent / tooling config (Claude Code, etc.)
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+ # These files often contain machine-local paths and per-machine permission
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+ # allowlists that should not be shared.
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+ .claude/
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+ !.claude/agents/
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+ !.claude/commands/
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+
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+ # Skill output (research/audit artifacts — point-in-time, not source).
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+ # Per the skill-output-hygiene rule. Never commit these to a public repo.
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+ skill-output/
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+
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+ # Secrets — defensive, even though none exist today
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+ .env
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+ .env.*
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+ !.env.example
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+ .openai
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+ .openai.*
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+ .anthropic
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+ .anthropic.*
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+ *.pem
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+ *.key
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+ *.p12
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+ *.pfx
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+ *.jks
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+ id_rsa
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+ id_ed25519
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+ credentials*.json
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+ secrets*.json
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+
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+ # Terraform / IaC state
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+ *.tfstate
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+ *.tfstate.*
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+ *.tfvars
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+ !*.tfvars.example
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+
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+ # OS cruft
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+ .DS_Store
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+ Thumbs.db
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+ # Changelog
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+
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+ lede's release notes. Tag annotations on each `vX.Y.Z` git tag are the
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+ canonical record; this file is a human-readable summary in one place.
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+
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+ Entries below `## [0.2.2]` reference the project under its previous name,
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+ `skimr`. The v0.0.1 / v0.2.0 / v0.2.1 / v0.2.2 git tags + GitHub Releases
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+ remain as `skimr` releases — they were real shipped artifacts under that
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+ name. See the v0.3.0 entry for the rename rationale.
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+
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+ ## [0.3.0] — 2026-04-28
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+
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+ **Renamed: `skimr` → `lede`.** No behavior, fixture, or output changes;
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+ this is a wholesale rename to avoid namespace conflict with the
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+ well-known `skimr` R package. New install / import:
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+
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+ ```bash
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+ pip install lede
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+ ```
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+
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+ ```python
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+ from lede import summarize
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+ ```
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+
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+ Companion package: `skimr-spacy` → `lede-spacy`, module
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+ `skimr_spacy` → `lede_spacy`. Rust crate: `skimr` → `lede`. Repo:
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+ `yonk-labs/skimr` → `yonk-labs/lede` (GitHub auto-redirects the old
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+ URL).
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+
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+ The historical `v0.2.x` `skimr` tags + GitHub Releases stay as-is for
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+ archaeology — they were real releases, just under the old name.
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+
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+ ### Migration
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+
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+ ```bash
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+ # Python
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+ pip uninstall skimr skimr-spacy
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+ pip install lede # or: pip install lede[wordforms,yake,textrank]
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+ pip install lede-spacy # if you used the spaCy companion
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+ ```
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+
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+ ```diff
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+ - from skimr import summarize, brief, clean_text, strip_think, extract_keyword
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+ + from lede import summarize, brief, clean_text, strip_think, extract_keyword
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+
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+ - from skimr.extract import stats, outline, metadata, phrases, correlate_facts
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+ + from lede.extract import stats, outline, metadata, phrases, correlate_facts
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+
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+ - import skimr_spacy
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+ + import lede_spacy
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+ ```
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+
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+ ```toml
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+ # Rust Cargo.toml
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+ - skimr = { version = "0.2.2" }
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+ + lede = { version = "0.3.0" }
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+ ```
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+
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+ ```rust
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+ - use skimr::{summarize, Mode};
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+ + use lede::{summarize, Mode};
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+ ```
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+
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+ Other than the rename, identical to v0.2.2.
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+
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+ ## [0.2.2] — 2026-04-27
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+
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+ **Docs-only patch.** No code changes; behavior, fixtures, and public
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+ API unchanged from `v0.2.1`. This release rolls up the documentation
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+ work that landed between the `v0.2.1` tag and the public-flip click,
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+ plus the prod-ready audit's day-1 paper cuts.
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+
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+ ### Added
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+ - **`docs/guide.md`** — user-facing tutorial. 9 lessons walking through
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+ every feature with actual outputs and "change this knob, see what
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+ happens" prompts. Each lesson tags whether the snippet is byte-
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+ identical in Rust or Python-only with rationale.
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+ - **`docs/REFERENCE.md` § Runtime parity** — explicit per-feature
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+ Python vs Rust availability matrix. Calls out which Python-only
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+ features (`textrank`, `yake`, spaCy NER) are feasible-to-port-but-
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+ not-yet vs which are deliberately Python-only by contract.
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+ - **`packages/skimr-spacy/README.md` rewrite** — user-facing pitch
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+ with a real side-by-side example: same input through `backend="regex"`
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+ (returns `entities=()`) and `backend="spacy"` (returns 11 entities).
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+ Performance numbers measured locally. Decision criteria (when to
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+ use, when not to) called out explicitly.
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+ - `SECURITY.md` § "Known transitive dependency notes" — documents the
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+ `rand 0.7.3` `unsound` advisory (RUSTSEC-2026-0097) that surfaces
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+ under `cargo audit` when the `wordforms` cargo feature is enabled.
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+ Practical exposure on the `wordforms` path is effectively zero
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+ (skimr ships no custom logger); documented per public-OSS hygiene.
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+
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+ ### Fixed (paper cuts from the v0.2.1 prod-ready audit)
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+ - `CONTRIBUTING.md` and `CLAUDE.md` cited stale test counts (181 / 116);
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+ updated to soft `~230` / `~120` so future test additions don't
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+ require an immediate doc edit.
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+ - `CLAUDE.md` Status block: `v0.2.0 shipped 2026-04-26` →
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+ `v0.2.1 shipped 2026-04-27`.
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+ - `README.md` Apollo-example timing claim (`Time: 0.16 ms`) was
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+ ambiguous about which runtime; now reads `~0.15 ms (Python, p50 of
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+ 50 runs on this paragraph)` with the cross-corpus p50 (Python 0.42
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+ ms, Rust 0.13 ms) cited for context. Same treatment on the
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+ `attach=` timing.
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+ - `.github/workflows/test.yml` `pip-audit --ignore-vuln GHSA-rrqc-c2jx-6jgv`
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+ flag dropped — the suppression had no comment and the advisory was
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+ no longer flagged by `pip-audit --strict` anyway. Replaced with an
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+ inline comment explaining the warn-only triage policy and how to
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+ add a properly-documented suppression in the future.
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+
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+ ## [0.2.1] — 2026-04-27
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+
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+ **Patch release — public-flip readiness.** No new API surface; this is
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+ a quality, robustness, and presentation pass on top of v0.2.0.
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+ External callers of `summarize()` / `brief()` / `skimr.extract.*` see
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+ the same shapes; existing fixture bytes are preserved. The v0.2 design
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+ contract is unchanged.
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+
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+ ### Fixed (real bugs)
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+ - **ReDoS in `extract.stats`** — Python `re` engine took **224 s** on a
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+ 50 K-digit input followed by a near-unit keyword. Numeric quantifiers
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+ bounded to `\d{1,15}` and sentences with 20+ digit unbroken runs
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+ skipped. Now **1.5 ms** on the same input. Mirrored in Rust for
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+ parity. Two new regression tests in each language.
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+ - **Rust `extract::stats::ctx()` UTF-8 panic and Python ↔ Rust drift** —
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+ the ±25-char context window was 25 *bytes* in Rust vs 25 *chars* in
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+ Python. Em-dashes / accented Latin / emoji adjacent to a stat token
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+ pushed the two outputs 2+ bytes apart and could panic Rust on a
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+ multi-byte boundary. Now char-counted on both sides; the new
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+ per-fixture parity walker enforces this.
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+ - **Python CLI mojibake on non-UTF-8 locales** — `Path.read_text()`
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+ picked up the OS default encoding (cp1252 on Windows). Forced
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+ UTF-8 for both file and stdin reads; restores parity with the
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+ Rust CLI.
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+ - **Rust CLI swallowed stdout write errors** — `let _ =` ate
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+ `BrokenPipe` and other I/O errors. Now `BrokenPipe` (user piped
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+ into `head`) returns 0; other errors propagate to non-zero exit.
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+ - **Sentence splitter NUL panic** — Rust used `assert!` on the
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+ internal sentinel byte; PDF-extracted text and ETL outputs can
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+ contain NULs. Now silently stripped in both languages.
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+ - **Sentence splitter "no." handling** — the unconditional `"no"`
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+ abbreviation merged "He said no. Then he left." into one sentence.
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+ Now context-sensitive: `"No. 5"` is protected; bare `"no."` is not.
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+ - **Coverage paragraph mapping** — substring-based "first containing
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+ paragraph wins" biased coverage on docs with template/FAQ-style
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+ repeated sentences. Now occurrence-counted: K-th occurrence → K-th
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+ matching paragraph.
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+ - **Coverage join separator** — was `"\n"` while default and legacy
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+ modes used `" "`. Now `" "` in all three for byte-stability across
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+ modes.
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+ - **`extract_keyword` empty-keys footgun** — silent `LEFT(text, 2000)`
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+ chop is gone; empty/all-filtered keywords now return `""` in both
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+ languages.
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+ - **`metadata.dates` bare-years claim** — `extract.metadata` regex
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+ now matches `(?:19|20)\d{2}` years to match the doc and parallel
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+ `extract.stats._DATE_RE`.
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+ - **Four `.expect("no NaN")` panic sites in Rust** — replaced with
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+ `.unwrap_or(Ordering::Equal)`. NaN in pipeline scores now degrades
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+ to deterministic Equal rather than panicking the worker.
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+ - **Rust 1.93 `clippy::cast_sign_loss` regression in `brief.rs`** —
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+ allow-listed with a justification comment; the cast is provably
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+ non-negative.
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+
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+ ### Added
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+ - **Per-fixture v0.2 parity walker** — 70 fixtures (7 primitives × 10
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+ corpora) byte-identical between Python and Rust. Enforces SC-C on
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+ the v0.2 differentiator surface, not just the v0.1 four-function
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+ contract. Caught the `ctx()` char-vs-byte drift above.
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+ - **Edge-case fixtures** (`fixtures/edge_cases/`) — multibyte UTF-8,
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+ CP1252 smart quotes, 50K-digit ReDoS bait, ~1 MB document. 50
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+ parametrized tests across 10 primitives × 5 fixtures.
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+ - **CI matrix expansion** — `tests` workflow installs `[dev,textrank,
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+ wordforms,yake]` and verifies each extra path. New `skimr-spacy`
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+ workflow runs the 17 companion-package tests + downloads the
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+ `en_core_web_sm` model. Both `cargo audit` and `pip-audit` run on
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+ every push (warn-only on findings).
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+ - **`brief()` explicit `convert_word_names` kwarg** — Python and Rust
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+ now accept an explicit override (`None` = auto-detect for
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+ back-compat; `True` / `False` locks parity across runtimes
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+ regardless of which extras are installed).
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+ - **`docs/comparison.md`** — worked side-by-side examples of skimr
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+ vs Sumy LexRank/TextRank/LSA vs LLM API on real corpora, with
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+ measured timings from the benchmark suite.
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+ - **`docs/v0-2-design.md` + `docs/skimr-spacy-integration.md`** —
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+ promoted from buried `docs/superpowers/specs/` paths. Same content,
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+ cleaner public-facing location.
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+ - **Status badges in README** — 4 CI workflow badges + release +
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+ license + Python 3.10+ + Rust 1.85+.
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+ - **Plain-language README opening + Apollo 11 quick example** —
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+ replaces the academic "deterministic, zero-dependency
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+ text-shrinker" framing with a concrete demonstration.
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+ - **`MAINTAINERS.md`** — single-maintainer disclosure with bus-factor
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+ honesty + decision authority + release cadence.
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+ - **`SECURITY.md`** — private report path + threat model scope.
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+ - **`CONTRIBUTING.md`** — quick-start + parity contract + style
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+ notes + CI overview.
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+ - **`examples/` directory** — 7 runnable scripts covering quickstart,
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+ the `attach=` RAG-prep API, `brief()`, each extract primitive
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+ standalone, paragraph-chunked pipeline for long docs, the
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+ `skimr-spacy` companion, and the `[wordforms]` extra. CI smoke-runs
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+ the no-extras-needed ones on every push.
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+ - **Heading-pattern shared helper** — heading regexes live in
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+ `_headings.{py,rs}` only; previously-duplicated 70-line copies in
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+ `extract/outline.{py,rs}` deleted.
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+ - **Scaling notes in `docs/REFERENCE.md`** — typical-document p50
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+ table, large-document warnings, recommended chunking pattern for
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+ >100 KB inputs.
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+ - **GitHub Release object** for `v0.2.0`.
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+
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+ ### Changed
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+ - **`networkx` pin** — `networkx>=3.0,<3.5` because `skimr.textrank`
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+ uses `_pagerank_python` (private API; underscore prefix). Drop the
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+ upper bound when textrank is rewritten against the public API.
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+ - **`pyproject.toml` Development Status classifier** —
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+ `3 - Alpha` → `4 - Beta`. 427 tests, tagged release, CI green is
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+ past alpha.
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+
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+ ### Removed (transient or pre-skimr)
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+ - `docs/RESUME.md` — agent session-state.
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+ - `skill-output/` — research, audit, and session artifacts; now
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+ gitignored.
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+ - `summarize-output.py` — original Python prototype, predates skimr.
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+ - `extractive-performance.md` — pre-skimr benchmark notes (superseded
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+ by `benchmarks/quality/matrix-2026-04-26.md`).
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+ - `SUMMARIZATION.md`, `extractive_functions.{sql,md}` — original
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+ algorithmic spec and PL/pgSQL reference. Provenance comments in
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+ source updated to describe the algorithm directly without name-
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+ checking the now-removed files.
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+ - `docs/upstream-context-yonk-taskstash.md` — wrong project's context.
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+ - `docs/superpowers/plans/` — executed implementation plans.
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+
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+ ## [0.2.0] — 2026-04-26
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+
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+ **v0.2 is the RAG-prep primitive.** A single `summarize(attach=…)` call
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+ now returns a summary plus structured stats / outline / metadata /
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+ phrases / correlated-facts in sub-5 ms. New top-level `brief()` composes
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+ a paste-ready overview. The `skimr.extract.*` namespace exposes every
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+ primitive standalone.
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+
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+ ### Added
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+ - `summarize(text, max_length, *, mode="default", attach=…)` — returns
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+ `SummaryResult` with `.summary` plus optional structured enrichments.
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+ `str(r)` and `f"{r}"` still evaluate to the summary string for
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+ legacy callers.
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+ - `Mode::Default` (Rust) / `mode="default"` (Python) — TF-IDF + position
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+ + length composite plus C1 scorer tweaks (heading filter, cue-phrase
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+ boost, digit bonus, section-position weight).
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+ - `Mode::Coverage` / `mode="coverage"` — paragraph-aware coverage
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+ selection that tries to land at least one sentence per paragraph
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+ before greedy-filling.
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+ - `Mode::Legacy` / `mode="legacy"` — preserves v0.0.1 60/25/15 bytes.
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+ - `skimr.brief(text, *, format="string"|"markdown"|"dict")` — composes
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+ summarize + key_facts + toc.
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+ - `skimr.extract.outline(text)` — section headings + key sentence.
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+ - `skimr.extract.toc(text)` — section names only.
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+ - `skimr.extract.stats(text, *, convert_word_names=False)` — numeric
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+ facts (money, percent, date, duration, count) with sentence context.
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+ - `skimr.extract.key_facts(text, *, max_facts=10)` — sentences ranked
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+ by stat density.
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+ - `skimr.extract.metadata(text, *, backend=None)` — dates, amounts,
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+ URLs, entities (entities require the spaCy backend).
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+ - `skimr.extract.phrases(text, keywords=None)` — repeated multi-word
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+ n-grams (with `backend="yake"` available behind the `[yake]` extra).
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+ - `skimr.extract.correlate_facts(text, *, backend=None)` — entity ↔
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+ number/polarity pairings.
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+ - Optional `[wordforms]` extra (Python) and `wordforms` cargo feature
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+ (Rust) — both bind to the `text2num` crate so spelled-out numbers
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+ ("five thousand documents") surface as Stats with byte-identical
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+ output across runtimes.
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+ - Optional `[yake]` extra — registers a YAKE backend for `phrases()`
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+ (Python only).
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+ - Companion package `skimr-spacy` — provides spaCy-backed `entities`,
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+ `metadata`, `phrases`, and `correlate_facts` backends. Imports
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+ register themselves via `skimr.extract._backends`. Rust does not
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+ ship NER by design.
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+
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+ ### Performance
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+ - `summarize` core path: 0.42 ms p50 (Python) / 0.13 ms p50 (Rust),
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+ measured on the 10-corpus benchmark. Sumy LexRank/TextRank/LSA
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+ backends sit at 11–12 ms p50.
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+ - `summarize(attach=[…all 5…])`: 2.40 ms p50 worst case 3.80 ms across
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+ 10 corpora — still ~5× faster than any sumy backend while producing
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+ structured output sumy doesn't.
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+ - See `benchmarks/quality/matrix-2026-04-26.md` for the method × corpus
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+ × time × enrichments grid.
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+
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+ ### Quality
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+ - SC-A (rubric) — `skimr/tfidf-v0.2` ranks #1 on the A1 5-dimension
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+ rubric and on the A4 cross-family Qwen judge across 10 corpora.
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+ Beats `sumy/TextRank` on both signals. See
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+ `benchmarks/quality/review-2026-04-21.md`.
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+ - SC-D (extraction quality) — 3 of 5 primitives pass the gate
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+ (`stats`, `outline`, `metadata`) at recall ≥ 0.85, precision ≥ 0.80
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+ under the format-tolerant match rule. `phrases` (R 0.478) and
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+ `correlate_facts` (P 0.25) ship below the gate by design — the gold
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+ fixtures expect coreference + salience semantics that the regex
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+ primitive doesn't model. Tracked for v0.3+; documented in README's
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+ "Known v0.2 gates" section, `docs/REFERENCE.md`, and the v0.2.0 tag
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+ annotation.
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+
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+ ### Hardening (this release also includes the public-flip cleanup)
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+ - ReDoS guard in `extract.stats()`: numeric quantifiers bounded to
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+ `\d{1,15}` and sentences containing a 20+ digit unbroken run are
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+ skipped. Mirror in Rust for byte-identical parity even though Rust's
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+ regex engine is RE2 and structurally immune. A 50 K-digit input that
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+ previously hung Python for 224 s now completes in 1.5 ms.
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+ - UTF-8 char-boundary snap in Rust `extract::stats::ctx()` — accented
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+ Latin / emoji adjacent to a stat token previously panicked on the
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+ byte-window slice.
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+ - Python CLI forces UTF-8 file + stdin reads — fixes mojibake on
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+ Windows / non-UTF-8 locales and restores parity against the Rust
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+ CLI.
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+
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+ ### Documentation
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+ - `README.md` — new "What's new in v0.2" section, updated install path
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+ (skimr is not yet on PyPI), "Known v0.2 gates" disclosure.
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+ - `docs/REFERENCE.md` — full primitive catalog (all 7 extract
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+ primitives + `summarize(attach=…)` + `brief()` 3 formats).
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+ - `docs/integration-memo.md` — refreshed to reflect the v0.2 RAG-prep
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+ API for chunkshop's `summary_embed` / `metadata-extractors` consumers.
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+ - `MAINTAINERS.md` + `SECURITY.md` + this `CHANGELOG.md` — added for
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+ public-flip hygiene.
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+
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+ ## [0.0.1] — early reference tag
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+
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+ Original tagged commit, predates the v0.2 differentiation. Not
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+ recommended for new use; included in the tag list only as historical
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+ record.
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