large-image 1.35.7.dev4__tar.gz → 1.35.7.dev8__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (76) hide show
  1. {large_image-1.35.7.dev4/large_image.egg-info → large_image-1.35.7.dev8}/PKG-INFO +79 -79
  2. large_image-1.35.7.dev8/docs/girder_annotation_access.rst +62 -0
  3. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/docs/girder_index.rst +1 -0
  4. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8/large_image.egg-info}/PKG-INFO +79 -79
  5. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/large_image.egg-info/SOURCES.txt +1 -0
  6. large_image-1.35.7.dev8/large_image.egg-info/requires.txt +172 -0
  7. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/large_image.egg-info/scm_file_list.json +1 -0
  8. large_image-1.35.7.dev4/large_image.egg-info/requires.txt +0 -172
  9. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/LICENSE +0 -0
  10. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/NOTICE +0 -0
  11. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/README.rst +0 -0
  12. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/docs/annotations.rst +0 -0
  13. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/docs/api_index.rst +0 -0
  14. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/docs/caching.rst +0 -0
  15. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/docs/conf.py +0 -0
  16. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/docs/config_options.rst +0 -0
  17. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/docs/development.rst +0 -0
  18. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/docs/dicomweb_assetstore.rst +0 -0
  19. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/docs/format_examples_datastore.py +0 -0
  20. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/docs/formats.rst +0 -0
  21. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/docs/generate_format_table.py +0 -0
  22. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/docs/getting_started.rst +0 -0
  23. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/docs/girder_annotation_config_options.rst +0 -0
  24. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/docs/girder_caching.rst +0 -0
  25. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/docs/girder_config_options.rst +0 -0
  26. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/docs/image_conversion.rst +0 -0
  27. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/docs/index.rst +0 -0
  28. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/docs/make_docs.sh +0 -0
  29. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/docs/multi_source_specification.rst +0 -0
  30. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/docs/notebooks/frame_viewer_example.ipynb +0 -0
  31. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/docs/notebooks/large_image_examples.ipynb +0 -0
  32. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/docs/notebooks/zarr_sink_example.ipynb +0 -0
  33. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/docs/notebooks.rst +0 -0
  34. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/docs/plottable.rst +0 -0
  35. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/docs/static/K.png +0 -0
  36. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/docs/static/custom.css +0 -0
  37. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/docs/tilesource_options.rst +0 -0
  38. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/docs/upgrade.rst +0 -0
  39. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/large_image/__init__.py +0 -0
  40. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/large_image/cache_util/__init__.py +0 -0
  41. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/large_image/cache_util/base.py +0 -0
  42. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/large_image/cache_util/cache.py +0 -0
  43. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/large_image/cache_util/cachefactory.py +0 -0
  44. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/large_image/cache_util/memcache.py +0 -0
  45. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/large_image/cache_util/rediscache.py +0 -0
  46. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/large_image/config.py +0 -0
  47. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/large_image/constants.py +0 -0
  48. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/large_image/exceptions.py +0 -0
  49. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/large_image/tilesource/__init__.py +0 -0
  50. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/large_image/tilesource/base.py +0 -0
  51. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/large_image/tilesource/eager_utils/__init__.py +0 -0
  52. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/large_image/tilesource/eager_utils/eager_fn.py +0 -0
  53. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/large_image/tilesource/eager_utils/eager_image_modifications.py +0 -0
  54. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/large_image/tilesource/eager_utils/eager_pytorch_threading_context.py +0 -0
  55. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/large_image/tilesource/eager_utils/eager_read_args.py +0 -0
  56. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/large_image/tilesource/eager_utils/eager_shared_array.py +0 -0
  57. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/large_image/tilesource/eager_utils/eager_wsi_operations.py +0 -0
  58. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/large_image/tilesource/eageriterator.py +0 -0
  59. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/large_image/tilesource/geo.py +0 -0
  60. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/large_image/tilesource/jupyter.py +0 -0
  61. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/large_image/tilesource/resample.py +0 -0
  62. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/large_image/tilesource/stylefuncs.py +0 -0
  63. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/large_image/tilesource/tiledict.py +0 -0
  64. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/large_image/tilesource/tileiterator.py +0 -0
  65. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/large_image/tilesource/utilities.py +0 -0
  66. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/large_image/widgets/CompositeLayers.vue +0 -0
  67. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/large_image/widgets/DualInput.vue +0 -0
  68. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/large_image/widgets/FrameSelector.vue +0 -0
  69. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/large_image/widgets/HistogramEditor.vue +0 -0
  70. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/large_image/widgets/colors.json +0 -0
  71. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/large_image/widgets/components.py +0 -0
  72. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/large_image.egg-info/dependency_links.txt +0 -0
  73. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/large_image.egg-info/not-zip-safe +0 -0
  74. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/large_image.egg-info/top_level.txt +0 -0
  75. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/setup.cfg +0 -0
  76. {large_image-1.35.7.dev4 → large_image-1.35.7.dev8}/setup.py +0 -0
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: large-image
3
- Version: 1.35.7.dev4
3
+ Version: 1.35.7.dev8
4
4
  Summary: Python modules to work with large, multiresolution images.
5
5
  Home-page: https://github.com/girder/large_image
6
6
  Author: Kitware, Inc.
@@ -29,7 +29,7 @@ Requires-Dist: pylibmc>=1.5.1; platform_system != "Windows" and extra == "memcac
29
29
  Provides-Extra: redis
30
30
  Requires-Dist: redis>=4.5.5; extra == "redis"
31
31
  Provides-Extra: converter
32
- Requires-Dist: large-image-converter>=1.35.7.dev4; extra == "converter"
32
+ Requires-Dist: large-image-converter>=1.35.7.dev8; extra == "converter"
33
33
  Provides-Extra: colormaps
34
34
  Requires-Dist: matplotlib; extra == "colormaps"
35
35
  Requires-Dist: tol-colors>=2.0.0; extra == "colormaps"
@@ -45,110 +45,110 @@ Requires-Dist: simplejpeg; python_version < "3.15" and extra == "performance"
45
45
  Provides-Extra: pykdtree
46
46
  Requires-Dist: pykdtree; extra == "pykdtree"
47
47
  Provides-Extra: bioformats
48
- Requires-Dist: large-image-source-bioformats>=1.35.7.dev4; extra == "bioformats"
48
+ Requires-Dist: large-image-source-bioformats>=1.35.7.dev8; extra == "bioformats"
49
49
  Provides-Extra: deepzoom
50
- Requires-Dist: large-image-source-deepzoom>=1.35.7.dev4; extra == "deepzoom"
50
+ Requires-Dist: large-image-source-deepzoom>=1.35.7.dev8; extra == "deepzoom"
51
51
  Provides-Extra: dicom
52
- Requires-Dist: large-image-source-dicom>=1.35.7.dev4; extra == "dicom"
52
+ Requires-Dist: large-image-source-dicom>=1.35.7.dev8; extra == "dicom"
53
53
  Provides-Extra: dummy
54
- Requires-Dist: large-image-source-dummy>=1.35.7.dev4; extra == "dummy"
54
+ Requires-Dist: large-image-source-dummy>=1.35.7.dev8; extra == "dummy"
55
55
  Provides-Extra: gdal
56
- Requires-Dist: large-image-source-gdal>=1.35.7.dev4; extra == "gdal"
56
+ Requires-Dist: large-image-source-gdal>=1.35.7.dev8; extra == "gdal"
57
57
  Provides-Extra: mapnik
58
- Requires-Dist: large-image-source-mapnik>=1.35.7.dev4; extra == "mapnik"
58
+ Requires-Dist: large-image-source-mapnik>=1.35.7.dev8; extra == "mapnik"
59
59
  Provides-Extra: multi
60
- Requires-Dist: large-image-source-multi>=1.35.7.dev4; extra == "multi"
60
+ Requires-Dist: large-image-source-multi>=1.35.7.dev8; extra == "multi"
61
61
  Provides-Extra: nd2
62
- Requires-Dist: large-image-source-nd2>=1.35.7.dev4; extra == "nd2"
62
+ Requires-Dist: large-image-source-nd2>=1.35.7.dev8; extra == "nd2"
63
63
  Provides-Extra: ometiff
64
- Requires-Dist: large-image-source-ometiff>=1.35.7.dev4; extra == "ometiff"
64
+ Requires-Dist: large-image-source-ometiff>=1.35.7.dev8; extra == "ometiff"
65
65
  Provides-Extra: openjpeg
66
- Requires-Dist: large-image-source-openjpeg>=1.35.7.dev4; extra == "openjpeg"
66
+ Requires-Dist: large-image-source-openjpeg>=1.35.7.dev8; extra == "openjpeg"
67
67
  Provides-Extra: openslide
68
- Requires-Dist: large-image-source-openslide>=1.35.7.dev4; extra == "openslide"
68
+ Requires-Dist: large-image-source-openslide>=1.35.7.dev8; extra == "openslide"
69
69
  Provides-Extra: pil
70
- Requires-Dist: large-image-source-pil>=1.35.7.dev4; extra == "pil"
70
+ Requires-Dist: large-image-source-pil>=1.35.7.dev8; extra == "pil"
71
71
  Provides-Extra: rasterio
72
- Requires-Dist: large-image-source-rasterio>=1.35.7.dev4; extra == "rasterio"
72
+ Requires-Dist: large-image-source-rasterio>=1.35.7.dev8; extra == "rasterio"
73
73
  Provides-Extra: test
74
- Requires-Dist: large-image-source-test>=1.35.7.dev4; extra == "test"
74
+ Requires-Dist: large-image-source-test>=1.35.7.dev8; extra == "test"
75
75
  Provides-Extra: tiff
76
- Requires-Dist: large-image-source-tiff>=1.35.7.dev4; extra == "tiff"
76
+ Requires-Dist: large-image-source-tiff>=1.35.7.dev8; extra == "tiff"
77
77
  Provides-Extra: tifffile
78
- Requires-Dist: large-image-source-tifffile>=1.35.7.dev4; extra == "tifffile"
78
+ Requires-Dist: large-image-source-tifffile>=1.35.7.dev8; extra == "tifffile"
79
79
  Provides-Extra: vips
80
- Requires-Dist: large-image-source-vips>=1.35.7.dev4; extra == "vips"
80
+ Requires-Dist: large-image-source-vips>=1.35.7.dev8; extra == "vips"
81
81
  Provides-Extra: zarr
82
- Requires-Dist: large-image-source-zarr>=1.35.7.dev4; extra == "zarr"
82
+ Requires-Dist: large-image-source-zarr>=1.35.7.dev8; extra == "zarr"
83
83
  Provides-Extra: sources
84
- Requires-Dist: large-image-source-dummy>=1.35.7.dev4; extra == "sources"
85
- Requires-Dist: large-image-source-ometiff>=1.35.7.dev4; extra == "sources"
86
- Requires-Dist: large-image-source-openjpeg>=1.35.7.dev4; extra == "sources"
87
- Requires-Dist: large-image-source-test>=1.35.7.dev4; extra == "sources"
88
- Requires-Dist: large-image-source-pil>=1.35.7.dev4; extra == "sources"
89
- Requires-Dist: large-image-source-bioformats>=1.35.7.dev4; extra == "sources"
90
- Requires-Dist: large-image-source-rasterio>=1.35.7.dev4; extra == "sources"
91
- Requires-Dist: large-image-source-tifffile>=1.35.7.dev4; extra == "sources"
92
- Requires-Dist: large-image-source-multi>=1.35.7.dev4; extra == "sources"
93
- Requires-Dist: large-image-source-vips>=1.35.7.dev4; extra == "sources"
94
- Requires-Dist: large-image-source-dicom>=1.35.7.dev4; extra == "sources"
95
- Requires-Dist: large-image-source-gdal>=1.35.7.dev4; extra == "sources"
96
- Requires-Dist: large-image-source-openslide>=1.35.7.dev4; extra == "sources"
97
- Requires-Dist: large-image-source-mapnik>=1.35.7.dev4; extra == "sources"
98
- Requires-Dist: large-image-source-nd2>=1.35.7.dev4; extra == "sources"
99
- Requires-Dist: large-image-source-tiff>=1.35.7.dev4; extra == "sources"
100
- Requires-Dist: large-image-source-zarr>=1.35.7.dev4; extra == "sources"
101
- Requires-Dist: large-image-source-deepzoom>=1.35.7.dev4; extra == "sources"
84
+ Requires-Dist: large-image-source-openslide>=1.35.7.dev8; extra == "sources"
85
+ Requires-Dist: large-image-source-tifffile>=1.35.7.dev8; extra == "sources"
86
+ Requires-Dist: large-image-source-mapnik>=1.35.7.dev8; extra == "sources"
87
+ Requires-Dist: large-image-source-openjpeg>=1.35.7.dev8; extra == "sources"
88
+ Requires-Dist: large-image-source-zarr>=1.35.7.dev8; extra == "sources"
89
+ Requires-Dist: large-image-source-deepzoom>=1.35.7.dev8; extra == "sources"
90
+ Requires-Dist: large-image-source-ometiff>=1.35.7.dev8; extra == "sources"
91
+ Requires-Dist: large-image-source-dicom>=1.35.7.dev8; extra == "sources"
92
+ Requires-Dist: large-image-source-vips>=1.35.7.dev8; extra == "sources"
93
+ Requires-Dist: large-image-source-multi>=1.35.7.dev8; extra == "sources"
94
+ Requires-Dist: large-image-source-tiff>=1.35.7.dev8; extra == "sources"
95
+ Requires-Dist: large-image-source-nd2>=1.35.7.dev8; extra == "sources"
96
+ Requires-Dist: large-image-source-gdal>=1.35.7.dev8; extra == "sources"
97
+ Requires-Dist: large-image-source-test>=1.35.7.dev8; extra == "sources"
98
+ Requires-Dist: large-image-source-dummy>=1.35.7.dev8; extra == "sources"
99
+ Requires-Dist: large-image-source-bioformats>=1.35.7.dev8; extra == "sources"
100
+ Requires-Dist: large-image-source-pil>=1.35.7.dev8; extra == "sources"
101
+ Requires-Dist: large-image-source-rasterio>=1.35.7.dev8; extra == "sources"
102
102
  Provides-Extra: all
103
- Requires-Dist: large-image-source-rasterio[all]>=1.35.7.dev4; extra == "all"
104
- Requires-Dist: ipyleaflet; extra == "all"
105
- Requires-Dist: redis>=4.5.5; extra == "all"
106
- Requires-Dist: large-image-source-test>=1.35.7.dev4; extra == "all"
107
- Requires-Dist: large-image-source-pil>=1.35.7.dev4; extra == "all"
108
- Requires-Dist: pyvips; extra == "all"
109
- Requires-Dist: large-image-source-tifffile>=1.35.7.dev4; extra == "all"
110
- Requires-Dist: large-image-source-pil[all]>=1.35.7.dev4; extra == "all"
111
- Requires-Dist: large-image-source-openslide>=1.35.7.dev4; extra == "all"
112
- Requires-Dist: large-image-source-gdal>=1.35.7.dev4; extra == "all"
113
- Requires-Dist: large-image-source-tiff[all]>=1.35.7.dev4; extra == "all"
114
- Requires-Dist: large-image-source-mapnik>=1.35.7.dev4; extra == "all"
115
- Requires-Dist: large-image-source-nd2>=1.35.7.dev4; extra == "all"
103
+ Requires-Dist: large-image-source-tifffile>=1.35.7.dev8; extra == "all"
104
+ Requires-Dist: large-image-source-rasterio[all]>=1.35.7.dev8; extra == "all"
105
+ Requires-Dist: large-image-source-multi[all]>=1.35.7.dev8; extra == "all"
116
106
  Requires-Dist: pylibmc>=1.5.1; platform_system != "Windows" and extra == "all"
117
- Requires-Dist: large-image-source-zarr>=1.35.7.dev4; extra == "all"
118
- Requires-Dist: ipyvue; extra == "all"
119
- Requires-Dist: large-image-converter>=1.35.7.dev4; extra == "all"
120
- Requires-Dist: tol-colors>=2.0.0; extra == "all"
121
- Requires-Dist: large-image-source-dummy>=1.35.7.dev4; extra == "all"
122
- Requires-Dist: large-image-source-ometiff>=1.35.7.dev4; extra == "all"
123
- Requires-Dist: psutil>=4.2.0; extra == "all"
124
- Requires-Dist: large-image-source-bioformats>=1.35.7.dev4; extra == "all"
125
- Requires-Dist: large-image-source-vips>=1.35.7.dev4; extra == "all"
107
+ Requires-Dist: large-image-source-mapnik>=1.35.7.dev8; extra == "all"
108
+ Requires-Dist: large-image-source-zarr>=1.35.7.dev8; extra == "all"
126
109
  Requires-Dist: matplotlib; extra == "all"
127
- Requires-Dist: large-image-source-multi>=1.35.7.dev4; extra == "all"
128
- Requires-Dist: large-image-source-rasterio>=1.35.7.dev4; extra == "all"
129
- Requires-Dist: large-image-source-tiff>=1.35.7.dev4; extra == "all"
130
- Requires-Dist: large-image-source-multi[all]>=1.35.7.dev4; extra == "all"
131
- Requires-Dist: large-image-source-dicom>=1.35.7.dev4; extra == "all"
110
+ Requires-Dist: psutil>=4.2.0; extra == "all"
111
+ Requires-Dist: large-image-source-gdal>=1.35.7.dev8; extra == "all"
112
+ Requires-Dist: large-image-source-dummy>=1.35.7.dev8; extra == "all"
113
+ Requires-Dist: large-image-converter>=1.35.7.dev8; extra == "all"
114
+ Requires-Dist: large-image-source-tiff>=1.35.7.dev8; extra == "all"
115
+ Requires-Dist: large-image-source-rasterio>=1.35.7.dev8; extra == "all"
116
+ Requires-Dist: pyvips; extra == "all"
117
+ Requires-Dist: large-image-source-openslide>=1.35.7.dev8; extra == "all"
118
+ Requires-Dist: large-image-source-tiff[all]>=1.35.7.dev8; extra == "all"
119
+ Requires-Dist: redis>=4.5.5; extra == "all"
120
+ Requires-Dist: tol-colors>=2.0.0; extra == "all"
132
121
  Requires-Dist: aiohttp; extra == "all"
133
- Requires-Dist: simplejpeg; python_version < "3.15" and extra == "all"
134
- Requires-Dist: large-image-source-openjpeg>=1.35.7.dev4; extra == "all"
122
+ Requires-Dist: ipyvue; extra == "all"
135
123
  Requires-Dist: pykdtree; extra == "all"
136
- Requires-Dist: large-image-source-deepzoom>=1.35.7.dev4; extra == "all"
124
+ Requires-Dist: large-image-source-openjpeg>=1.35.7.dev8; extra == "all"
125
+ Requires-Dist: large-image-source-deepzoom>=1.35.7.dev8; extra == "all"
126
+ Requires-Dist: large-image-source-ometiff>=1.35.7.dev8; extra == "all"
127
+ Requires-Dist: ipyleaflet; extra == "all"
128
+ Requires-Dist: large-image-source-pil[all]>=1.35.7.dev8; extra == "all"
129
+ Requires-Dist: large-image-source-vips>=1.35.7.dev8; extra == "all"
130
+ Requires-Dist: large-image-source-multi>=1.35.7.dev8; extra == "all"
131
+ Requires-Dist: large-image-source-nd2>=1.35.7.dev8; extra == "all"
132
+ Requires-Dist: large-image-source-pil>=1.35.7.dev8; extra == "all"
133
+ Requires-Dist: large-image-source-test>=1.35.7.dev8; extra == "all"
134
+ Requires-Dist: large-image-source-dicom>=1.35.7.dev8; extra == "all"
135
+ Requires-Dist: large-image-source-bioformats>=1.35.7.dev8; extra == "all"
136
+ Requires-Dist: simplejpeg; python_version < "3.15" and extra == "all"
137
137
  Provides-Extra: common
138
- Requires-Dist: large-image-source-rasterio[all]>=1.35.7.dev4; extra == "common"
138
+ Requires-Dist: large-image-source-openslide>=1.35.7.dev8; extra == "common"
139
+ Requires-Dist: large-image-source-tifffile>=1.35.7.dev8; extra == "common"
140
+ Requires-Dist: large-image-source-rasterio[all]>=1.35.7.dev8; extra == "common"
139
141
  Requires-Dist: tol-colors>=2.0.0; extra == "common"
140
- Requires-Dist: large-image-source-pil[common]>=1.35.7.dev4; extra == "common"
141
- Requires-Dist: large-image-source-test>=1.35.7.dev4; extra == "common"
142
+ Requires-Dist: large-image-source-zarr>=1.35.7.dev8; extra == "common"
143
+ Requires-Dist: large-image-source-pil[common]>=1.35.7.dev8; extra == "common"
144
+ Requires-Dist: large-image-source-deepzoom>=1.35.7.dev8; extra == "common"
142
145
  Requires-Dist: matplotlib; extra == "common"
143
- Requires-Dist: large-image-source-tifffile>=1.35.7.dev4; extra == "common"
144
- Requires-Dist: large-image-source-multi>=1.35.7.dev4; extra == "common"
145
- Requires-Dist: large-image-source-dicom>=1.35.7.dev4; extra == "common"
146
- Requires-Dist: large-image-source-openslide>=1.35.7.dev4; extra == "common"
147
- Requires-Dist: simplejpeg; python_version < "3.15" and extra == "common"
146
+ Requires-Dist: large-image-source-multi>=1.35.7.dev8; extra == "common"
147
+ Requires-Dist: large-image-source-nd2>=1.35.7.dev8; extra == "common"
148
148
  Requires-Dist: psutil>=4.2.0; extra == "common"
149
- Requires-Dist: large-image-source-nd2>=1.35.7.dev4; extra == "common"
150
- Requires-Dist: large-image-source-zarr>=1.35.7.dev4; extra == "common"
151
- Requires-Dist: large-image-source-deepzoom>=1.35.7.dev4; extra == "common"
149
+ Requires-Dist: large-image-source-test>=1.35.7.dev8; extra == "common"
150
+ Requires-Dist: large-image-source-dicom>=1.35.7.dev8; extra == "common"
151
+ Requires-Dist: simplejpeg; python_version < "3.15" and extra == "common"
152
152
  Provides-Extra: eager
153
153
  Requires-Dist: pykdtree; extra == "eager"
154
154
  Dynamic: author
@@ -0,0 +1,62 @@
1
+ Girder Annotation Access Control
2
+ ================================
3
+
4
+ Annotations have their own access control lists, separate from the item they are attached to.
5
+
6
+ Girder items do not have access control lists of their own; access to an item is determined by the folder that contains it. Annotations are different: each annotation stores its own list of users and groups with access, plus its own public flag. A user's access to an annotation does not automatically match their access to the item's folder.
7
+
8
+ Required Access
9
+ ---------------
10
+
11
+ Site administrators have full access to all annotations. For other users:
12
+
13
+ - Listing or reading the annotations on an item requires read access to the item (that is, to its folder) and read access to each annotation.
14
+ - Creating an annotation requires write access to the item's folder, or the ``Create annotations`` access flag on that folder.
15
+ - Modifying an annotation requires write access to the annotation and either write access to the item or the ``Create annotations`` access flag.
16
+ - Viewing or changing the access control list of an annotation requires admin access to the annotation.
17
+
18
+ Creating Annotations
19
+ --------------------
20
+
21
+ When an annotation is created, the access control list and public flag of the folder containing the item are copied to the annotation. The user who created the annotation is then given admin access to it.
22
+
23
+ This is a one-time copy. As a consequence, users with write or admin access to a folder get write or admin access to every annotation created in that folder, including annotations created by other users.
24
+
25
+ Copying an annotation to another item (``POST /annotation/{id}/copy``) creates a new annotation. It follows the same rules as creating one: the new annotation gets the access of the destination item's folder, and the user who copied it gets admin access.
26
+
27
+ Changing Folder Access
28
+ ----------------------
29
+
30
+ Changing the access control list or public flag of a folder does not change the access control lists of annotations that already exist on items in that folder, including when the change is applied to subfolders. For example:
31
+
32
+ - If a folder is shared with a user after annotations have been created, that user can see the items but not the existing annotations. Annotations created after the folder was shared will be visible to that user.
33
+ - If a user's access to a folder is removed, the existing annotations still list that user. The user cannot list or read those annotations through the item while they lack read access to it.
34
+
35
+ Moving Items and Annotations
36
+ ----------------------------
37
+
38
+ Moving an item to a different folder does not change the access control lists of its annotations. Moving an annotation to a different item (``PUT /annotation/{id}`` with an ``itemId``) also leaves its access control list unchanged. In both cases the annotations keep the access that was copied from their original folder.
39
+
40
+ Copying Items and Folders
41
+ -------------------------
42
+
43
+ When an item is copied (directly, or as part of copying a folder), its active annotations are copied as well, unless ``copyAnnotations`` is ``false``. The copied annotations get access as if they had been created in the destination folder: the access control list and public flag of the destination folder replace the original annotation's access control list, and the user who copied the item is given admin access.
44
+
45
+ The copied annotations keep the original annotation's creator, but that user is not given access to them unless the destination folder's access control list includes them. The original annotation's creator may not have access to the destination folder.
46
+
47
+ Changing Annotation Access
48
+ --------------------------
49
+
50
+ The access control list of a single annotation can be edited by a user with admin access to it, either through the API (``PUT /annotation/{id}/access``) or from the annotation's access dialog in the user interface. This replaces the annotation's access control list and public flag.
51
+
52
+ Changing Access for All Annotations in a Folder
53
+ -----------------------------------------------
54
+
55
+ If a user has admin access to any annotations on items in a folder or its subfolders, the folder's actions menu includes ``Annotation access control``. This dialog changes the access of many annotations at once:
56
+
57
+ - The dialog shows the access control list of a single annotation: the most recently created annotation in the folder or its subfolders to which the user has admin access.
58
+ - Saving the dialog replaces the access control list and public flag of every annotation on items in the folder to which the user has admin access. For site administrators, this is every annotation in the folder. The lists are replaced, not merged, so any user or group not in the dialog loses access. Because folder access is copied to new annotations, a user with admin access to a folder usually has admin access to other users' annotations in it, and saving this dialog can remove those users' access to their own annotations.
59
+ - Annotations in subfolders are only changed if the option to apply the change to subfolders is checked. The access control list shown in the dialog may come from a subfolder even when that option is not checked.
60
+ - The dialog closes as soon as the request is sent, without waiting for the changes to finish. If the request fails, no error is shown.
61
+
62
+ The same operation is available through the API as ``PUT /annotation/folder/{id}/access``.
@@ -11,6 +11,7 @@ To see an example Girder application with the ``large-image`` plugin, visit `dem
11
11
 
12
12
  girder_config_options
13
13
  girder_annotation_config_options
14
+ girder_annotation_access
14
15
  girder_caching
15
16
  dicomweb_assetstore
16
17
  plottable
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: large-image
3
- Version: 1.35.7.dev4
3
+ Version: 1.35.7.dev8
4
4
  Summary: Python modules to work with large, multiresolution images.
5
5
  Home-page: https://github.com/girder/large_image
6
6
  Author: Kitware, Inc.
@@ -29,7 +29,7 @@ Requires-Dist: pylibmc>=1.5.1; platform_system != "Windows" and extra == "memcac
29
29
  Provides-Extra: redis
30
30
  Requires-Dist: redis>=4.5.5; extra == "redis"
31
31
  Provides-Extra: converter
32
- Requires-Dist: large-image-converter>=1.35.7.dev4; extra == "converter"
32
+ Requires-Dist: large-image-converter>=1.35.7.dev8; extra == "converter"
33
33
  Provides-Extra: colormaps
34
34
  Requires-Dist: matplotlib; extra == "colormaps"
35
35
  Requires-Dist: tol-colors>=2.0.0; extra == "colormaps"
@@ -45,110 +45,110 @@ Requires-Dist: simplejpeg; python_version < "3.15" and extra == "performance"
45
45
  Provides-Extra: pykdtree
46
46
  Requires-Dist: pykdtree; extra == "pykdtree"
47
47
  Provides-Extra: bioformats
48
- Requires-Dist: large-image-source-bioformats>=1.35.7.dev4; extra == "bioformats"
48
+ Requires-Dist: large-image-source-bioformats>=1.35.7.dev8; extra == "bioformats"
49
49
  Provides-Extra: deepzoom
50
- Requires-Dist: large-image-source-deepzoom>=1.35.7.dev4; extra == "deepzoom"
50
+ Requires-Dist: large-image-source-deepzoom>=1.35.7.dev8; extra == "deepzoom"
51
51
  Provides-Extra: dicom
52
- Requires-Dist: large-image-source-dicom>=1.35.7.dev4; extra == "dicom"
52
+ Requires-Dist: large-image-source-dicom>=1.35.7.dev8; extra == "dicom"
53
53
  Provides-Extra: dummy
54
- Requires-Dist: large-image-source-dummy>=1.35.7.dev4; extra == "dummy"
54
+ Requires-Dist: large-image-source-dummy>=1.35.7.dev8; extra == "dummy"
55
55
  Provides-Extra: gdal
56
- Requires-Dist: large-image-source-gdal>=1.35.7.dev4; extra == "gdal"
56
+ Requires-Dist: large-image-source-gdal>=1.35.7.dev8; extra == "gdal"
57
57
  Provides-Extra: mapnik
58
- Requires-Dist: large-image-source-mapnik>=1.35.7.dev4; extra == "mapnik"
58
+ Requires-Dist: large-image-source-mapnik>=1.35.7.dev8; extra == "mapnik"
59
59
  Provides-Extra: multi
60
- Requires-Dist: large-image-source-multi>=1.35.7.dev4; extra == "multi"
60
+ Requires-Dist: large-image-source-multi>=1.35.7.dev8; extra == "multi"
61
61
  Provides-Extra: nd2
62
- Requires-Dist: large-image-source-nd2>=1.35.7.dev4; extra == "nd2"
62
+ Requires-Dist: large-image-source-nd2>=1.35.7.dev8; extra == "nd2"
63
63
  Provides-Extra: ometiff
64
- Requires-Dist: large-image-source-ometiff>=1.35.7.dev4; extra == "ometiff"
64
+ Requires-Dist: large-image-source-ometiff>=1.35.7.dev8; extra == "ometiff"
65
65
  Provides-Extra: openjpeg
66
- Requires-Dist: large-image-source-openjpeg>=1.35.7.dev4; extra == "openjpeg"
66
+ Requires-Dist: large-image-source-openjpeg>=1.35.7.dev8; extra == "openjpeg"
67
67
  Provides-Extra: openslide
68
- Requires-Dist: large-image-source-openslide>=1.35.7.dev4; extra == "openslide"
68
+ Requires-Dist: large-image-source-openslide>=1.35.7.dev8; extra == "openslide"
69
69
  Provides-Extra: pil
70
- Requires-Dist: large-image-source-pil>=1.35.7.dev4; extra == "pil"
70
+ Requires-Dist: large-image-source-pil>=1.35.7.dev8; extra == "pil"
71
71
  Provides-Extra: rasterio
72
- Requires-Dist: large-image-source-rasterio>=1.35.7.dev4; extra == "rasterio"
72
+ Requires-Dist: large-image-source-rasterio>=1.35.7.dev8; extra == "rasterio"
73
73
  Provides-Extra: test
74
- Requires-Dist: large-image-source-test>=1.35.7.dev4; extra == "test"
74
+ Requires-Dist: large-image-source-test>=1.35.7.dev8; extra == "test"
75
75
  Provides-Extra: tiff
76
- Requires-Dist: large-image-source-tiff>=1.35.7.dev4; extra == "tiff"
76
+ Requires-Dist: large-image-source-tiff>=1.35.7.dev8; extra == "tiff"
77
77
  Provides-Extra: tifffile
78
- Requires-Dist: large-image-source-tifffile>=1.35.7.dev4; extra == "tifffile"
78
+ Requires-Dist: large-image-source-tifffile>=1.35.7.dev8; extra == "tifffile"
79
79
  Provides-Extra: vips
80
- Requires-Dist: large-image-source-vips>=1.35.7.dev4; extra == "vips"
80
+ Requires-Dist: large-image-source-vips>=1.35.7.dev8; extra == "vips"
81
81
  Provides-Extra: zarr
82
- Requires-Dist: large-image-source-zarr>=1.35.7.dev4; extra == "zarr"
82
+ Requires-Dist: large-image-source-zarr>=1.35.7.dev8; extra == "zarr"
83
83
  Provides-Extra: sources
84
- Requires-Dist: large-image-source-dummy>=1.35.7.dev4; extra == "sources"
85
- Requires-Dist: large-image-source-ometiff>=1.35.7.dev4; extra == "sources"
86
- Requires-Dist: large-image-source-openjpeg>=1.35.7.dev4; extra == "sources"
87
- Requires-Dist: large-image-source-test>=1.35.7.dev4; extra == "sources"
88
- Requires-Dist: large-image-source-pil>=1.35.7.dev4; extra == "sources"
89
- Requires-Dist: large-image-source-bioformats>=1.35.7.dev4; extra == "sources"
90
- Requires-Dist: large-image-source-rasterio>=1.35.7.dev4; extra == "sources"
91
- Requires-Dist: large-image-source-tifffile>=1.35.7.dev4; extra == "sources"
92
- Requires-Dist: large-image-source-multi>=1.35.7.dev4; extra == "sources"
93
- Requires-Dist: large-image-source-vips>=1.35.7.dev4; extra == "sources"
94
- Requires-Dist: large-image-source-dicom>=1.35.7.dev4; extra == "sources"
95
- Requires-Dist: large-image-source-gdal>=1.35.7.dev4; extra == "sources"
96
- Requires-Dist: large-image-source-openslide>=1.35.7.dev4; extra == "sources"
97
- Requires-Dist: large-image-source-mapnik>=1.35.7.dev4; extra == "sources"
98
- Requires-Dist: large-image-source-nd2>=1.35.7.dev4; extra == "sources"
99
- Requires-Dist: large-image-source-tiff>=1.35.7.dev4; extra == "sources"
100
- Requires-Dist: large-image-source-zarr>=1.35.7.dev4; extra == "sources"
101
- Requires-Dist: large-image-source-deepzoom>=1.35.7.dev4; extra == "sources"
84
+ Requires-Dist: large-image-source-openslide>=1.35.7.dev8; extra == "sources"
85
+ Requires-Dist: large-image-source-tifffile>=1.35.7.dev8; extra == "sources"
86
+ Requires-Dist: large-image-source-mapnik>=1.35.7.dev8; extra == "sources"
87
+ Requires-Dist: large-image-source-openjpeg>=1.35.7.dev8; extra == "sources"
88
+ Requires-Dist: large-image-source-zarr>=1.35.7.dev8; extra == "sources"
89
+ Requires-Dist: large-image-source-deepzoom>=1.35.7.dev8; extra == "sources"
90
+ Requires-Dist: large-image-source-ometiff>=1.35.7.dev8; extra == "sources"
91
+ Requires-Dist: large-image-source-dicom>=1.35.7.dev8; extra == "sources"
92
+ Requires-Dist: large-image-source-vips>=1.35.7.dev8; extra == "sources"
93
+ Requires-Dist: large-image-source-multi>=1.35.7.dev8; extra == "sources"
94
+ Requires-Dist: large-image-source-tiff>=1.35.7.dev8; extra == "sources"
95
+ Requires-Dist: large-image-source-nd2>=1.35.7.dev8; extra == "sources"
96
+ Requires-Dist: large-image-source-gdal>=1.35.7.dev8; extra == "sources"
97
+ Requires-Dist: large-image-source-test>=1.35.7.dev8; extra == "sources"
98
+ Requires-Dist: large-image-source-dummy>=1.35.7.dev8; extra == "sources"
99
+ Requires-Dist: large-image-source-bioformats>=1.35.7.dev8; extra == "sources"
100
+ Requires-Dist: large-image-source-pil>=1.35.7.dev8; extra == "sources"
101
+ Requires-Dist: large-image-source-rasterio>=1.35.7.dev8; extra == "sources"
102
102
  Provides-Extra: all
103
- Requires-Dist: large-image-source-rasterio[all]>=1.35.7.dev4; extra == "all"
104
- Requires-Dist: ipyleaflet; extra == "all"
105
- Requires-Dist: redis>=4.5.5; extra == "all"
106
- Requires-Dist: large-image-source-test>=1.35.7.dev4; extra == "all"
107
- Requires-Dist: large-image-source-pil>=1.35.7.dev4; extra == "all"
108
- Requires-Dist: pyvips; extra == "all"
109
- Requires-Dist: large-image-source-tifffile>=1.35.7.dev4; extra == "all"
110
- Requires-Dist: large-image-source-pil[all]>=1.35.7.dev4; extra == "all"
111
- Requires-Dist: large-image-source-openslide>=1.35.7.dev4; extra == "all"
112
- Requires-Dist: large-image-source-gdal>=1.35.7.dev4; extra == "all"
113
- Requires-Dist: large-image-source-tiff[all]>=1.35.7.dev4; extra == "all"
114
- Requires-Dist: large-image-source-mapnik>=1.35.7.dev4; extra == "all"
115
- Requires-Dist: large-image-source-nd2>=1.35.7.dev4; extra == "all"
103
+ Requires-Dist: large-image-source-tifffile>=1.35.7.dev8; extra == "all"
104
+ Requires-Dist: large-image-source-rasterio[all]>=1.35.7.dev8; extra == "all"
105
+ Requires-Dist: large-image-source-multi[all]>=1.35.7.dev8; extra == "all"
116
106
  Requires-Dist: pylibmc>=1.5.1; platform_system != "Windows" and extra == "all"
117
- Requires-Dist: large-image-source-zarr>=1.35.7.dev4; extra == "all"
118
- Requires-Dist: ipyvue; extra == "all"
119
- Requires-Dist: large-image-converter>=1.35.7.dev4; extra == "all"
120
- Requires-Dist: tol-colors>=2.0.0; extra == "all"
121
- Requires-Dist: large-image-source-dummy>=1.35.7.dev4; extra == "all"
122
- Requires-Dist: large-image-source-ometiff>=1.35.7.dev4; extra == "all"
123
- Requires-Dist: psutil>=4.2.0; extra == "all"
124
- Requires-Dist: large-image-source-bioformats>=1.35.7.dev4; extra == "all"
125
- Requires-Dist: large-image-source-vips>=1.35.7.dev4; extra == "all"
107
+ Requires-Dist: large-image-source-mapnik>=1.35.7.dev8; extra == "all"
108
+ Requires-Dist: large-image-source-zarr>=1.35.7.dev8; extra == "all"
126
109
  Requires-Dist: matplotlib; extra == "all"
127
- Requires-Dist: large-image-source-multi>=1.35.7.dev4; extra == "all"
128
- Requires-Dist: large-image-source-rasterio>=1.35.7.dev4; extra == "all"
129
- Requires-Dist: large-image-source-tiff>=1.35.7.dev4; extra == "all"
130
- Requires-Dist: large-image-source-multi[all]>=1.35.7.dev4; extra == "all"
131
- Requires-Dist: large-image-source-dicom>=1.35.7.dev4; extra == "all"
110
+ Requires-Dist: psutil>=4.2.0; extra == "all"
111
+ Requires-Dist: large-image-source-gdal>=1.35.7.dev8; extra == "all"
112
+ Requires-Dist: large-image-source-dummy>=1.35.7.dev8; extra == "all"
113
+ Requires-Dist: large-image-converter>=1.35.7.dev8; extra == "all"
114
+ Requires-Dist: large-image-source-tiff>=1.35.7.dev8; extra == "all"
115
+ Requires-Dist: large-image-source-rasterio>=1.35.7.dev8; extra == "all"
116
+ Requires-Dist: pyvips; extra == "all"
117
+ Requires-Dist: large-image-source-openslide>=1.35.7.dev8; extra == "all"
118
+ Requires-Dist: large-image-source-tiff[all]>=1.35.7.dev8; extra == "all"
119
+ Requires-Dist: redis>=4.5.5; extra == "all"
120
+ Requires-Dist: tol-colors>=2.0.0; extra == "all"
132
121
  Requires-Dist: aiohttp; extra == "all"
133
- Requires-Dist: simplejpeg; python_version < "3.15" and extra == "all"
134
- Requires-Dist: large-image-source-openjpeg>=1.35.7.dev4; extra == "all"
122
+ Requires-Dist: ipyvue; extra == "all"
135
123
  Requires-Dist: pykdtree; extra == "all"
136
- Requires-Dist: large-image-source-deepzoom>=1.35.7.dev4; extra == "all"
124
+ Requires-Dist: large-image-source-openjpeg>=1.35.7.dev8; extra == "all"
125
+ Requires-Dist: large-image-source-deepzoom>=1.35.7.dev8; extra == "all"
126
+ Requires-Dist: large-image-source-ometiff>=1.35.7.dev8; extra == "all"
127
+ Requires-Dist: ipyleaflet; extra == "all"
128
+ Requires-Dist: large-image-source-pil[all]>=1.35.7.dev8; extra == "all"
129
+ Requires-Dist: large-image-source-vips>=1.35.7.dev8; extra == "all"
130
+ Requires-Dist: large-image-source-multi>=1.35.7.dev8; extra == "all"
131
+ Requires-Dist: large-image-source-nd2>=1.35.7.dev8; extra == "all"
132
+ Requires-Dist: large-image-source-pil>=1.35.7.dev8; extra == "all"
133
+ Requires-Dist: large-image-source-test>=1.35.7.dev8; extra == "all"
134
+ Requires-Dist: large-image-source-dicom>=1.35.7.dev8; extra == "all"
135
+ Requires-Dist: large-image-source-bioformats>=1.35.7.dev8; extra == "all"
136
+ Requires-Dist: simplejpeg; python_version < "3.15" and extra == "all"
137
137
  Provides-Extra: common
138
- Requires-Dist: large-image-source-rasterio[all]>=1.35.7.dev4; extra == "common"
138
+ Requires-Dist: large-image-source-openslide>=1.35.7.dev8; extra == "common"
139
+ Requires-Dist: large-image-source-tifffile>=1.35.7.dev8; extra == "common"
140
+ Requires-Dist: large-image-source-rasterio[all]>=1.35.7.dev8; extra == "common"
139
141
  Requires-Dist: tol-colors>=2.0.0; extra == "common"
140
- Requires-Dist: large-image-source-pil[common]>=1.35.7.dev4; extra == "common"
141
- Requires-Dist: large-image-source-test>=1.35.7.dev4; extra == "common"
142
+ Requires-Dist: large-image-source-zarr>=1.35.7.dev8; extra == "common"
143
+ Requires-Dist: large-image-source-pil[common]>=1.35.7.dev8; extra == "common"
144
+ Requires-Dist: large-image-source-deepzoom>=1.35.7.dev8; extra == "common"
142
145
  Requires-Dist: matplotlib; extra == "common"
143
- Requires-Dist: large-image-source-tifffile>=1.35.7.dev4; extra == "common"
144
- Requires-Dist: large-image-source-multi>=1.35.7.dev4; extra == "common"
145
- Requires-Dist: large-image-source-dicom>=1.35.7.dev4; extra == "common"
146
- Requires-Dist: large-image-source-openslide>=1.35.7.dev4; extra == "common"
147
- Requires-Dist: simplejpeg; python_version < "3.15" and extra == "common"
146
+ Requires-Dist: large-image-source-multi>=1.35.7.dev8; extra == "common"
147
+ Requires-Dist: large-image-source-nd2>=1.35.7.dev8; extra == "common"
148
148
  Requires-Dist: psutil>=4.2.0; extra == "common"
149
- Requires-Dist: large-image-source-nd2>=1.35.7.dev4; extra == "common"
150
- Requires-Dist: large-image-source-zarr>=1.35.7.dev4; extra == "common"
151
- Requires-Dist: large-image-source-deepzoom>=1.35.7.dev4; extra == "common"
149
+ Requires-Dist: large-image-source-test>=1.35.7.dev8; extra == "common"
150
+ Requires-Dist: large-image-source-dicom>=1.35.7.dev8; extra == "common"
151
+ Requires-Dist: simplejpeg; python_version < "3.15" and extra == "common"
152
152
  Provides-Extra: eager
153
153
  Requires-Dist: pykdtree; extra == "eager"
154
154
  Dynamic: author
@@ -13,6 +13,7 @@ docs/format_examples_datastore.py
13
13
  docs/formats.rst
14
14
  docs/generate_format_table.py
15
15
  docs/getting_started.rst
16
+ docs/girder_annotation_access.rst
16
17
  docs/girder_annotation_config_options.rst
17
18
  docs/girder_caching.rst
18
19
  docs/girder_config_options.rst
@@ -0,0 +1,172 @@
1
+ cachetools
2
+ palettable
3
+ Pillow>=10.3
4
+ numpy
5
+ typing-extensions
6
+
7
+ [all]
8
+ large-image-source-tifffile>=1.35.7.dev8
9
+ large-image-source-rasterio[all]>=1.35.7.dev8
10
+ large-image-source-multi[all]>=1.35.7.dev8
11
+ large-image-source-mapnik>=1.35.7.dev8
12
+ large-image-source-zarr>=1.35.7.dev8
13
+ matplotlib
14
+ psutil>=4.2.0
15
+ large-image-source-gdal>=1.35.7.dev8
16
+ large-image-source-dummy>=1.35.7.dev8
17
+ large-image-converter>=1.35.7.dev8
18
+ large-image-source-tiff>=1.35.7.dev8
19
+ large-image-source-rasterio>=1.35.7.dev8
20
+ pyvips
21
+ large-image-source-openslide>=1.35.7.dev8
22
+ large-image-source-tiff[all]>=1.35.7.dev8
23
+ redis>=4.5.5
24
+ tol-colors>=2.0.0
25
+ aiohttp
26
+ ipyvue
27
+ pykdtree
28
+ large-image-source-openjpeg>=1.35.7.dev8
29
+ large-image-source-deepzoom>=1.35.7.dev8
30
+ large-image-source-ometiff>=1.35.7.dev8
31
+ ipyleaflet
32
+ large-image-source-pil[all]>=1.35.7.dev8
33
+ large-image-source-vips>=1.35.7.dev8
34
+ large-image-source-multi>=1.35.7.dev8
35
+ large-image-source-nd2>=1.35.7.dev8
36
+ large-image-source-pil>=1.35.7.dev8
37
+ large-image-source-test>=1.35.7.dev8
38
+ large-image-source-dicom>=1.35.7.dev8
39
+ large-image-source-bioformats>=1.35.7.dev8
40
+
41
+ [all:platform_system != "Windows"]
42
+ pylibmc>=1.5.1
43
+
44
+ [all:python_version < "3.15"]
45
+ simplejpeg
46
+
47
+ [bioformats]
48
+ large-image-source-bioformats>=1.35.7.dev8
49
+
50
+ [colormaps]
51
+ matplotlib
52
+ tol-colors>=2.0.0
53
+
54
+ [common]
55
+ large-image-source-openslide>=1.35.7.dev8
56
+ large-image-source-tifffile>=1.35.7.dev8
57
+ large-image-source-rasterio[all]>=1.35.7.dev8
58
+ tol-colors>=2.0.0
59
+ large-image-source-zarr>=1.35.7.dev8
60
+ large-image-source-pil[common]>=1.35.7.dev8
61
+ large-image-source-deepzoom>=1.35.7.dev8
62
+ matplotlib
63
+ large-image-source-multi>=1.35.7.dev8
64
+ large-image-source-nd2>=1.35.7.dev8
65
+ psutil>=4.2.0
66
+ large-image-source-test>=1.35.7.dev8
67
+ large-image-source-dicom>=1.35.7.dev8
68
+
69
+ [common:python_version < "3.15"]
70
+ simplejpeg
71
+
72
+ [converter]
73
+ large-image-converter>=1.35.7.dev8
74
+
75
+ [deepzoom]
76
+ large-image-source-deepzoom>=1.35.7.dev8
77
+
78
+ [dicom]
79
+ large-image-source-dicom>=1.35.7.dev8
80
+
81
+ [dummy]
82
+ large-image-source-dummy>=1.35.7.dev8
83
+
84
+ [eager]
85
+ pykdtree
86
+
87
+ [gdal]
88
+ large-image-source-gdal>=1.35.7.dev8
89
+
90
+ [jupyter]
91
+ aiohttp
92
+ ipyvue
93
+ ipyleaflet
94
+
95
+ [mapnik]
96
+ large-image-source-mapnik>=1.35.7.dev8
97
+
98
+ [memcached]
99
+
100
+ [memcached:platform_system != "Windows"]
101
+ pylibmc>=1.5.1
102
+
103
+ [multi]
104
+ large-image-source-multi>=1.35.7.dev8
105
+
106
+ [nd2]
107
+ large-image-source-nd2>=1.35.7.dev8
108
+
109
+ [ometiff]
110
+ large-image-source-ometiff>=1.35.7.dev8
111
+
112
+ [openjpeg]
113
+ large-image-source-openjpeg>=1.35.7.dev8
114
+
115
+ [openslide]
116
+ large-image-source-openslide>=1.35.7.dev8
117
+
118
+ [performance]
119
+ psutil>=4.2.0
120
+
121
+ [performance:python_version < "3.15"]
122
+ simplejpeg
123
+
124
+ [pil]
125
+ large-image-source-pil>=1.35.7.dev8
126
+
127
+ [pykdtree]
128
+ pykdtree
129
+
130
+ [rasterio]
131
+ large-image-source-rasterio>=1.35.7.dev8
132
+
133
+ [redis]
134
+ redis>=4.5.5
135
+
136
+ [sources]
137
+ large-image-source-openslide>=1.35.7.dev8
138
+ large-image-source-tifffile>=1.35.7.dev8
139
+ large-image-source-mapnik>=1.35.7.dev8
140
+ large-image-source-openjpeg>=1.35.7.dev8
141
+ large-image-source-zarr>=1.35.7.dev8
142
+ large-image-source-deepzoom>=1.35.7.dev8
143
+ large-image-source-ometiff>=1.35.7.dev8
144
+ large-image-source-dicom>=1.35.7.dev8
145
+ large-image-source-vips>=1.35.7.dev8
146
+ large-image-source-multi>=1.35.7.dev8
147
+ large-image-source-tiff>=1.35.7.dev8
148
+ large-image-source-nd2>=1.35.7.dev8
149
+ large-image-source-gdal>=1.35.7.dev8
150
+ large-image-source-test>=1.35.7.dev8
151
+ large-image-source-dummy>=1.35.7.dev8
152
+ large-image-source-bioformats>=1.35.7.dev8
153
+ large-image-source-pil>=1.35.7.dev8
154
+ large-image-source-rasterio>=1.35.7.dev8
155
+
156
+ [test]
157
+ large-image-source-test>=1.35.7.dev8
158
+
159
+ [tiff]
160
+ large-image-source-tiff>=1.35.7.dev8
161
+
162
+ [tifffile]
163
+ large-image-source-tifffile>=1.35.7.dev8
164
+
165
+ [tiledoutput]
166
+ pyvips
167
+
168
+ [vips]
169
+ large-image-source-vips>=1.35.7.dev8
170
+
171
+ [zarr]
172
+ large-image-source-zarr>=1.35.7.dev8
@@ -33,6 +33,7 @@
33
33
  "docs/formats.rst",
34
34
  "docs/generate_format_table.py",
35
35
  "docs/getting_started.rst",
36
+ "docs/girder_annotation_access.rst",
36
37
  "docs/girder_annotation_config_options.rst",
37
38
  "docs/girder_caching.rst",
38
39
  "docs/girder_config_options.rst",
@@ -1,172 +0,0 @@
1
- cachetools
2
- palettable
3
- Pillow>=10.3
4
- numpy
5
- typing-extensions
6
-
7
- [all]
8
- large-image-source-rasterio[all]>=1.35.7.dev4
9
- ipyleaflet
10
- redis>=4.5.5
11
- large-image-source-test>=1.35.7.dev4
12
- large-image-source-pil>=1.35.7.dev4
13
- pyvips
14
- large-image-source-tifffile>=1.35.7.dev4
15
- large-image-source-pil[all]>=1.35.7.dev4
16
- large-image-source-openslide>=1.35.7.dev4
17
- large-image-source-gdal>=1.35.7.dev4
18
- large-image-source-tiff[all]>=1.35.7.dev4
19
- large-image-source-mapnik>=1.35.7.dev4
20
- large-image-source-nd2>=1.35.7.dev4
21
- large-image-source-zarr>=1.35.7.dev4
22
- ipyvue
23
- large-image-converter>=1.35.7.dev4
24
- tol-colors>=2.0.0
25
- large-image-source-dummy>=1.35.7.dev4
26
- large-image-source-ometiff>=1.35.7.dev4
27
- psutil>=4.2.0
28
- large-image-source-bioformats>=1.35.7.dev4
29
- large-image-source-vips>=1.35.7.dev4
30
- matplotlib
31
- large-image-source-multi>=1.35.7.dev4
32
- large-image-source-rasterio>=1.35.7.dev4
33
- large-image-source-tiff>=1.35.7.dev4
34
- large-image-source-multi[all]>=1.35.7.dev4
35
- large-image-source-dicom>=1.35.7.dev4
36
- aiohttp
37
- large-image-source-openjpeg>=1.35.7.dev4
38
- pykdtree
39
- large-image-source-deepzoom>=1.35.7.dev4
40
-
41
- [all:platform_system != "Windows"]
42
- pylibmc>=1.5.1
43
-
44
- [all:python_version < "3.15"]
45
- simplejpeg
46
-
47
- [bioformats]
48
- large-image-source-bioformats>=1.35.7.dev4
49
-
50
- [colormaps]
51
- matplotlib
52
- tol-colors>=2.0.0
53
-
54
- [common]
55
- large-image-source-rasterio[all]>=1.35.7.dev4
56
- tol-colors>=2.0.0
57
- large-image-source-pil[common]>=1.35.7.dev4
58
- large-image-source-test>=1.35.7.dev4
59
- matplotlib
60
- large-image-source-tifffile>=1.35.7.dev4
61
- large-image-source-multi>=1.35.7.dev4
62
- large-image-source-dicom>=1.35.7.dev4
63
- large-image-source-openslide>=1.35.7.dev4
64
- psutil>=4.2.0
65
- large-image-source-nd2>=1.35.7.dev4
66
- large-image-source-zarr>=1.35.7.dev4
67
- large-image-source-deepzoom>=1.35.7.dev4
68
-
69
- [common:python_version < "3.15"]
70
- simplejpeg
71
-
72
- [converter]
73
- large-image-converter>=1.35.7.dev4
74
-
75
- [deepzoom]
76
- large-image-source-deepzoom>=1.35.7.dev4
77
-
78
- [dicom]
79
- large-image-source-dicom>=1.35.7.dev4
80
-
81
- [dummy]
82
- large-image-source-dummy>=1.35.7.dev4
83
-
84
- [eager]
85
- pykdtree
86
-
87
- [gdal]
88
- large-image-source-gdal>=1.35.7.dev4
89
-
90
- [jupyter]
91
- aiohttp
92
- ipyvue
93
- ipyleaflet
94
-
95
- [mapnik]
96
- large-image-source-mapnik>=1.35.7.dev4
97
-
98
- [memcached]
99
-
100
- [memcached:platform_system != "Windows"]
101
- pylibmc>=1.5.1
102
-
103
- [multi]
104
- large-image-source-multi>=1.35.7.dev4
105
-
106
- [nd2]
107
- large-image-source-nd2>=1.35.7.dev4
108
-
109
- [ometiff]
110
- large-image-source-ometiff>=1.35.7.dev4
111
-
112
- [openjpeg]
113
- large-image-source-openjpeg>=1.35.7.dev4
114
-
115
- [openslide]
116
- large-image-source-openslide>=1.35.7.dev4
117
-
118
- [performance]
119
- psutil>=4.2.0
120
-
121
- [performance:python_version < "3.15"]
122
- simplejpeg
123
-
124
- [pil]
125
- large-image-source-pil>=1.35.7.dev4
126
-
127
- [pykdtree]
128
- pykdtree
129
-
130
- [rasterio]
131
- large-image-source-rasterio>=1.35.7.dev4
132
-
133
- [redis]
134
- redis>=4.5.5
135
-
136
- [sources]
137
- large-image-source-dummy>=1.35.7.dev4
138
- large-image-source-ometiff>=1.35.7.dev4
139
- large-image-source-openjpeg>=1.35.7.dev4
140
- large-image-source-test>=1.35.7.dev4
141
- large-image-source-pil>=1.35.7.dev4
142
- large-image-source-bioformats>=1.35.7.dev4
143
- large-image-source-rasterio>=1.35.7.dev4
144
- large-image-source-tifffile>=1.35.7.dev4
145
- large-image-source-multi>=1.35.7.dev4
146
- large-image-source-vips>=1.35.7.dev4
147
- large-image-source-dicom>=1.35.7.dev4
148
- large-image-source-gdal>=1.35.7.dev4
149
- large-image-source-openslide>=1.35.7.dev4
150
- large-image-source-mapnik>=1.35.7.dev4
151
- large-image-source-nd2>=1.35.7.dev4
152
- large-image-source-tiff>=1.35.7.dev4
153
- large-image-source-zarr>=1.35.7.dev4
154
- large-image-source-deepzoom>=1.35.7.dev4
155
-
156
- [test]
157
- large-image-source-test>=1.35.7.dev4
158
-
159
- [tiff]
160
- large-image-source-tiff>=1.35.7.dev4
161
-
162
- [tifffile]
163
- large-image-source-tifffile>=1.35.7.dev4
164
-
165
- [tiledoutput]
166
- pyvips
167
-
168
- [vips]
169
- large-image-source-vips>=1.35.7.dev4
170
-
171
- [zarr]
172
- large-image-source-zarr>=1.35.7.dev4