large-image 1.30.7.dev16__tar.gz → 1.30.7.dev20__tar.gz

{large_image-1.30.7.dev16/large_image.egg-info → large_image-1.30.7.dev20}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: large-image
-Version: 1.30.7.dev16
+Version: 1.30.7.dev20
 Summary: Python modules to work with large, multiresolution images.
 Home-page: https://github.com/girder/large_image
 Author: Kitware, Inc.
@@ -30,7 +30,7 @@ Requires-Dist: pylibmc>=1.5.1; platform_system != "Windows" and extra == "memcac
 Provides-Extra: redis
 Requires-Dist: redis>=4.5.5; extra == "redis"
 Provides-Extra: converter
-Requires-Dist: large-image-converter>=1.30.7.dev16; extra == "converter"
+Requires-Dist: large-image-converter>=1.30.7.dev20; extra == "converter"
 Provides-Extra: colormaps
 Requires-Dist: matplotlib; extra == "colormaps"
 Requires-Dist: tol_colors; extra == "colormaps"
@@ -40,106 +40,106 @@ Provides-Extra: performance
 Requires-Dist: psutil>=4.2.0; extra == "performance"
 Requires-Dist: simplejpeg; extra == "performance"
 Provides-Extra: bioformats
-Requires-Dist: large-image-source-bioformats>=1.30.7.dev16; extra == "bioformats"
+Requires-Dist: large-image-source-bioformats>=1.30.7.dev20; extra == "bioformats"
 Provides-Extra: deepzoom
-Requires-Dist: large-image-source-deepzoom>=1.30.7.dev16; extra == "deepzoom"
+Requires-Dist: large-image-source-deepzoom>=1.30.7.dev20; extra == "deepzoom"
 Provides-Extra: dicom
-Requires-Dist: large-image-source-dicom>=1.30.7.dev16; extra == "dicom"
+Requires-Dist: large-image-source-dicom>=1.30.7.dev20; extra == "dicom"
 Provides-Extra: dummy
-Requires-Dist: large-image-source-dummy>=1.30.7.dev16; extra == "dummy"
+Requires-Dist: large-image-source-dummy>=1.30.7.dev20; extra == "dummy"
 Provides-Extra: gdal
-Requires-Dist: large-image-source-gdal>=1.30.7.dev16; extra == "gdal"
+Requires-Dist: large-image-source-gdal>=1.30.7.dev20; extra == "gdal"
 Provides-Extra: mapnik
-Requires-Dist: large-image-source-mapnik>=1.30.7.dev16; extra == "mapnik"
+Requires-Dist: large-image-source-mapnik>=1.30.7.dev20; extra == "mapnik"
 Provides-Extra: multi
-Requires-Dist: large-image-source-multi>=1.30.7.dev16; extra == "multi"
+Requires-Dist: large-image-source-multi>=1.30.7.dev20; extra == "multi"
 Provides-Extra: nd2
-Requires-Dist: large-image-source-nd2>=1.30.7.dev16; extra == "nd2"
+Requires-Dist: large-image-source-nd2>=1.30.7.dev20; extra == "nd2"
 Provides-Extra: ometiff
-Requires-Dist: large-image-source-ometiff>=1.30.7.dev16; extra == "ometiff"
+Requires-Dist: large-image-source-ometiff>=1.30.7.dev20; extra == "ometiff"
 Provides-Extra: openjpeg
-Requires-Dist: large-image-source-openjpeg>=1.30.7.dev16; extra == "openjpeg"
+Requires-Dist: large-image-source-openjpeg>=1.30.7.dev20; extra == "openjpeg"
 Provides-Extra: openslide
-Requires-Dist: large-image-source-openslide>=1.30.7.dev16; extra == "openslide"
+Requires-Dist: large-image-source-openslide>=1.30.7.dev20; extra == "openslide"
 Provides-Extra: pil
-Requires-Dist: large-image-source-pil>=1.30.7.dev16; extra == "pil"
+Requires-Dist: large-image-source-pil>=1.30.7.dev20; extra == "pil"
 Provides-Extra: rasterio
-Requires-Dist: large-image-source-rasterio>=1.30.7.dev16; extra == "rasterio"
+Requires-Dist: large-image-source-rasterio>=1.30.7.dev20; extra == "rasterio"
 Provides-Extra: test
-Requires-Dist: large-image-source-test>=1.30.7.dev16; extra == "test"
+Requires-Dist: large-image-source-test>=1.30.7.dev20; extra == "test"
 Provides-Extra: tiff
-Requires-Dist: large-image-source-tiff>=1.30.7.dev16; extra == "tiff"
+Requires-Dist: large-image-source-tiff>=1.30.7.dev20; extra == "tiff"
 Provides-Extra: tifffile
-Requires-Dist: large-image-source-tifffile>=1.30.7.dev16; extra == "tifffile"
+Requires-Dist: large-image-source-tifffile>=1.30.7.dev20; extra == "tifffile"
 Provides-Extra: vips
-Requires-Dist: large-image-source-vips>=1.30.7.dev16; extra == "vips"
+Requires-Dist: large-image-source-vips>=1.30.7.dev20; extra == "vips"
 Provides-Extra: zarr
-Requires-Dist: large-image-source-zarr>=1.30.7.dev16; extra == "zarr"
+Requires-Dist: large-image-source-zarr>=1.30.7.dev20; extra == "zarr"
 Provides-Extra: sources
-Requires-Dist: large-image-source-zarr>=1.30.7.dev16; extra == "sources"
-Requires-Dist: large-image-source-deepzoom>=1.30.7.dev16; extra == "sources"
-Requires-Dist: large-image-source-gdal>=1.30.7.dev16; extra == "sources"
-Requires-Dist: large-image-source-test>=1.30.7.dev16; extra == "sources"
-Requires-Dist: large-image-source-tifffile>=1.30.7.dev16; extra == "sources"
-Requires-Dist: large-image-source-bioformats>=1.30.7.dev16; extra == "sources"
-Requires-Dist: large-image-source-dicom>=1.30.7.dev16; extra == "sources"
-Requires-Dist: large-image-source-mapnik>=1.30.7.dev16; extra == "sources"
-Requires-Dist: large-image-source-nd2>=1.30.7.dev16; extra == "sources"
-Requires-Dist: large-image-source-openjpeg>=1.30.7.dev16; extra == "sources"
-Requires-Dist: large-image-source-dummy>=1.30.7.dev16; extra == "sources"
-Requires-Dist: large-image-source-multi>=1.30.7.dev16; extra == "sources"
-Requires-Dist: large-image-source-vips>=1.30.7.dev16; extra == "sources"
-Requires-Dist: large-image-source-ometiff>=1.30.7.dev16; extra == "sources"
-Requires-Dist: large-image-source-pil>=1.30.7.dev16; extra == "sources"
-Requires-Dist: large-image-source-tiff>=1.30.7.dev16; extra == "sources"
-Requires-Dist: large-image-source-rasterio>=1.30.7.dev16; extra == "sources"
-Requires-Dist: large-image-source-openslide>=1.30.7.dev16; extra == "sources"
+Requires-Dist: large-image-source-bioformats>=1.30.7.dev20; extra == "sources"
+Requires-Dist: large-image-source-ometiff>=1.30.7.dev20; extra == "sources"
+Requires-Dist: large-image-source-openslide>=1.30.7.dev20; extra == "sources"
+Requires-Dist: large-image-source-tiff>=1.30.7.dev20; extra == "sources"
+Requires-Dist: large-image-source-zarr>=1.30.7.dev20; extra == "sources"
+Requires-Dist: large-image-source-dummy>=1.30.7.dev20; extra == "sources"
+Requires-Dist: large-image-source-rasterio>=1.30.7.dev20; extra == "sources"
+Requires-Dist: large-image-source-gdal>=1.30.7.dev20; extra == "sources"
+Requires-Dist: large-image-source-mapnik>=1.30.7.dev20; extra == "sources"
+Requires-Dist: large-image-source-multi>=1.30.7.dev20; extra == "sources"
+Requires-Dist: large-image-source-deepzoom>=1.30.7.dev20; extra == "sources"
+Requires-Dist: large-image-source-openjpeg>=1.30.7.dev20; extra == "sources"
+Requires-Dist: large-image-source-test>=1.30.7.dev20; extra == "sources"
+Requires-Dist: large-image-source-dicom>=1.30.7.dev20; extra == "sources"
+Requires-Dist: large-image-source-tifffile>=1.30.7.dev20; extra == "sources"
+Requires-Dist: large-image-source-pil>=1.30.7.dev20; extra == "sources"
+Requires-Dist: large-image-source-vips>=1.30.7.dev20; extra == "sources"
+Requires-Dist: large-image-source-nd2>=1.30.7.dev20; extra == "sources"
 Provides-Extra: all
-Requires-Dist: large-image-source-zarr>=1.30.7.dev16; extra == "all"
-Requires-Dist: tol_colors; extra == "all"
-Requires-Dist: psutil>=4.2.0; extra == "all"
-Requires-Dist: large-image-source-tifffile>=1.30.7.dev16; extra == "all"
-Requires-Dist: large-image-source-dicom>=1.30.7.dev16; extra == "all"
-Requires-Dist: large-image-source-openjpeg>=1.30.7.dev16; extra == "all"
-Requires-Dist: large-image-source-nd2>=1.30.7.dev16; extra == "all"
-Requires-Dist: large-image-converter>=1.30.7.dev16; extra == "all"
-Requires-Dist: large-image-source-mapnik>=1.30.7.dev16; extra == "all"
-Requires-Dist: large-image-source-dummy>=1.30.7.dev16; extra == "all"
-Requires-Dist: large-image-source-multi>=1.30.7.dev16; extra == "all"
-Requires-Dist: large-image-source-vips>=1.30.7.dev16; extra == "all"
-Requires-Dist: large-image-source-ometiff>=1.30.7.dev16; extra == "all"
-Requires-Dist: large-image-source-rasterio>=1.30.7.dev16; extra == "all"
 Requires-Dist: matplotlib; extra == "all"
-Requires-Dist: pylibmc>=1.5.1; platform_system != "Windows" and extra == "all"
-Requires-Dist: large-image-source-deepzoom>=1.30.7.dev16; extra == "all"
-Requires-Dist: large-image-source-gdal>=1.30.7.dev16; extra == "all"
-Requires-Dist: large-image-source-test>=1.30.7.dev16; extra == "all"
+Requires-Dist: large-image-source-bioformats>=1.30.7.dev20; extra == "all"
+Requires-Dist: simplejpeg; extra == "all"
+Requires-Dist: large-image-source-gdal>=1.30.7.dev20; extra == "all"
+Requires-Dist: large-image-source-multi>=1.30.7.dev20; extra == "all"
+Requires-Dist: large-image-source-test>=1.30.7.dev20; extra == "all"
+Requires-Dist: large-image-source-pil[all]>=1.30.7.dev20; extra == "all"
+Requires-Dist: large-image-source-dicom>=1.30.7.dev20; extra == "all"
+Requires-Dist: large-image-source-tifffile>=1.30.7.dev20; extra == "all"
+Requires-Dist: large-image-source-tiff>=1.30.7.dev20; extra == "all"
+Requires-Dist: tol_colors; extra == "all"
+Requires-Dist: large-image-source-ometiff>=1.30.7.dev20; extra == "all"
+Requires-Dist: large-image-source-openslide>=1.30.7.dev20; extra == "all"
+Requires-Dist: large-image-source-vips>=1.30.7.dev20; extra == "all"
+Requires-Dist: large-image-source-dummy>=1.30.7.dev20; extra == "all"
+Requires-Dist: large-image-source-rasterio>=1.30.7.dev20; extra == "all"
+Requires-Dist: large-image-source-mapnik>=1.30.7.dev20; extra == "all"
+Requires-Dist: large-image-source-rasterio[all]>=1.30.7.dev20; extra == "all"
 Requires-Dist: redis>=4.5.5; extra == "all"
-Requires-Dist: large-image-source-tiff[all]>=1.30.7.dev16; extra == "all"
+Requires-Dist: large-image-source-deepzoom>=1.30.7.dev20; extra == "all"
+Requires-Dist: large-image-source-openjpeg>=1.30.7.dev20; extra == "all"
+Requires-Dist: large-image-converter>=1.30.7.dev20; extra == "all"
+Requires-Dist: large-image-source-tiff[all]>=1.30.7.dev20; extra == "all"
 Requires-Dist: pyvips; extra == "all"
-Requires-Dist: large-image-source-bioformats>=1.30.7.dev16; extra == "all"
-Requires-Dist: large-image-source-multi[all]>=1.30.7.dev16; extra == "all"
-Requires-Dist: large-image-source-tiff>=1.30.7.dev16; extra == "all"
-Requires-Dist: large-image-source-pil>=1.30.7.dev16; extra == "all"
-Requires-Dist: large-image-source-pil[all]>=1.30.7.dev16; extra == "all"
-Requires-Dist: large-image-source-rasterio[all]>=1.30.7.dev16; extra == "all"
-Requires-Dist: simplejpeg; extra == "all"
-Requires-Dist: large-image-source-openslide>=1.30.7.dev16; extra == "all"
+Requires-Dist: large-image-source-multi[all]>=1.30.7.dev20; extra == "all"
+Requires-Dist: large-image-source-pil>=1.30.7.dev20; extra == "all"
+Requires-Dist: psutil>=4.2.0; extra == "all"
+Requires-Dist: pylibmc>=1.5.1; platform_system != "Windows" and extra == "all"
+Requires-Dist: large-image-source-zarr>=1.30.7.dev20; extra == "all"
+Requires-Dist: large-image-source-nd2>=1.30.7.dev20; extra == "all"
 Provides-Extra: common
-Requires-Dist: large-image-source-zarr>=1.30.7.dev16; extra == "common"
-Requires-Dist: large-image-source-deepzoom>=1.30.7.dev16; extra == "common"
-Requires-Dist: large-image-source-test>=1.30.7.dev16; extra == "common"
-Requires-Dist: psutil>=4.2.0; extra == "common"
-Requires-Dist: tol_colors; extra == "common"
-Requires-Dist: large-image-source-tifffile>=1.30.7.dev16; extra == "common"
-Requires-Dist: large-image-source-dicom>=1.30.7.dev16; extra == "common"
-Requires-Dist: large-image-source-nd2>=1.30.7.dev16; extra == "common"
-Requires-Dist: large-image-source-multi>=1.30.7.dev16; extra == "common"
 Requires-Dist: matplotlib; extra == "common"
-Requires-Dist: large-image-source-pil[all]>=1.30.7.dev16; extra == "common"
-Requires-Dist: large-image-source-rasterio[all]>=1.30.7.dev16; extra == "common"
+Requires-Dist: tol_colors; extra == "common"
+Requires-Dist: large-image-source-openslide>=1.30.7.dev20; extra == "common"
 Requires-Dist: simplejpeg; extra == "common"
-Requires-Dist: large-image-source-openslide>=1.30.7.dev16; extra == "common"
+Requires-Dist: large-image-source-rasterio[all]>=1.30.7.dev20; extra == "common"
+Requires-Dist: large-image-source-multi>=1.30.7.dev20; extra == "common"
+Requires-Dist: large-image-source-deepzoom>=1.30.7.dev20; extra == "common"
+Requires-Dist: large-image-source-test>=1.30.7.dev20; extra == "common"
+Requires-Dist: large-image-source-nd2>=1.30.7.dev20; extra == "common"
+Requires-Dist: large-image-source-pil[all]>=1.30.7.dev20; extra == "common"
+Requires-Dist: large-image-source-dicom>=1.30.7.dev20; extra == "common"
+Requires-Dist: psutil>=4.2.0; extra == "common"
+Requires-Dist: large-image-source-zarr>=1.30.7.dev20; extra == "common"
+Requires-Dist: large-image-source-tifffile>=1.30.7.dev20; extra == "common"
 
 Large Image
 ===========

{large_image-1.30.7.dev16 → large_image-1.30.7.dev20}/docs/getting_started.rst

@@ -296,6 +296,9 @@ Many image formats (such as TIFF) can contain multiple images within a single fi
 
 By default, the ``getTile``, ``getRegion``, and ``tileIterator`` methods will return all of the bands of a single frame.  The specific bands returned can be modified using the ``style`` parameter.  The specific frame, including any channel or other axes, is specified with the ``frame`` parameter.
 
+Since if can be useful to ask for a specific frame based on the axes values there are ``frameFromAxes`` and ``axesFromFrame`` utility functions.
+
+
 Styles - Changing colors, scales, and other properties
 ------------------------------------------------------
 

{large_image-1.30.7.dev16 → large_image-1.30.7.dev20}/large_image/exceptions.py

@@ -13,7 +13,11 @@ class TileSourceAssetstoreError(TileSourceError):
     pass
 
 
-class TileSourceXYZRangeError(TileSourceError):
+class TileSourceRangeError(TileSourceError):
+    pass
+
+
+class TileSourceXYZRangeError(TileSourceRangeError):
     pass
 
 

{large_image-1.30.7.dev16 → large_image-1.30.7.dev20}/large_image/tilesource/base.py

@@ -1006,7 +1006,7 @@ class TileSource(IPyLeafletMixin):
                 elif sc.mainImage.dtype.kind == 'f':
                     sc.dtype = 'float'
             sc.axis = sc.axis if sc.axis is not None else entry.get('axis')
-            sc.bandidx = 0 if image.shape[2] <= 2 else 1  # type: ignore[misc]
+            sc.bandidx = 0 if image.shape[2] <= 2 else 1
             sc.band = None
             if ((entry.get('frame') is None and not entry.get('framedelta')) or
                     entry.get('frame') == sc.mainFrame):
@@ -1021,29 +1021,29 @@ class TileSource(IPyLeafletMixin):
                               :sc.mainImage.shape[1],
                               :sc.mainImage.shape[2]]
             if (isinstance(entry.get('band'), int) and
-                    entry['band'] >= 1 and entry['band'] <= image.shape[2]):  # type: ignore[misc]
+                    entry['band'] >= 1 and entry['band'] <= image.shape[2]):
                 sc.bandidx = entry['band'] - 1
             sc.composite = entry.get('composite', 'lighten')
             if (hasattr(self, '_bandnames') and entry.get('band') and
                     str(entry['band']).lower() in self._bandnames and
-                    image.shape[2] > self._bandnames[  # type: ignore[misc]
+                    image.shape[2] > self._bandnames[
                         str(entry['band']).lower()]):
                 sc.bandidx = self._bandnames[str(entry['band']).lower()]
-            if entry.get('band') == 'red' and image.shape[2] > 2:  # type: ignore[misc]
+            if entry.get('band') == 'red' and image.shape[2] > 2:
                 sc.bandidx = 0
-            elif entry.get('band') == 'blue' and image.shape[2] > 2:  # type: ignore[misc]
+            elif entry.get('band') == 'blue' and image.shape[2] > 2:
                 sc.bandidx = 2
                 sc.band = image[:, :, 2]
             elif entry.get('band') == 'alpha':
-                sc.bandidx = (image.shape[2] - 1 if image.shape[2] in (2, 4)  # type: ignore[misc]
+                sc.bandidx = (image.shape[2] - 1 if image.shape[2] in (2, 4)
                               else None)
-                sc.band = (image[:, :, -1] if image.shape[2] in (2, 4) else  # type: ignore[misc]
+                sc.band = (image[:, :, -1] if image.shape[2] in (2, 4) else
                            np.full(image.shape[:2], 255, np.uint8))
                 sc.composite = entry.get('composite', 'multiply')
             if sc.band is None:
                 sc.band = image[
-                    :, :, sc.bandidx  # type: ignore[index]
-                    if sc.bandidx is not None and sc.bandidx < image.shape[2]  # type: ignore[misc]
+                    :, :, sc.bandidx
+                    if sc.bandidx is not None and sc.bandidx < image.shape[2]
                     else 0]
             sc.band = self._applyStyleFunction(sc.band, sc, 'preband')
             sc.palette = getPaletteColors(entry.get(
@@ -1076,7 +1076,7 @@ class TileSource(IPyLeafletMixin):
             # divide.
             # See https://docs.gimp.org/en/gimp-concepts-layer-modes.html for
             # some details.
-            for channel in range(sc.output.shape[2]):  # type: ignore[misc]
+            for channel in range(sc.output.shape[2]):
                 if np.all(sc.palette[:, channel] == sc.palette[0, channel]):
                     if ((sc.palette[0, channel] == 0 and sc.composite != 'multiply') or
                             (sc.palette[0, channel] == 255 and sc.composite == 'multiply')):
@@ -1117,7 +1117,7 @@ class TileSource(IPyLeafletMixin):
             sc.output = (sc.output * 65535 / 255).astype(np.uint16)
         elif sc.dtype == 'float':
             sc.output /= 255
-        if sc.axis is not None and 0 <= int(sc.axis) < sc.output.shape[2]:  # type: ignore[misc]
+        if sc.axis is not None and 0 <= int(sc.axis) < sc.output.shape[2]:
             sc.output = sc.output[:, :, sc.axis:sc.axis + 1]
         sc.output = self._applyStyleFunction(sc.output, sc, 'post')
         return sc.output
@@ -1145,7 +1145,7 @@ class TileSource(IPyLeafletMixin):
             tile = self._applyStyle(tile, getattr(self, 'style', None), x, y, z, frame)
         if tile.shape[0] != self.tileHeight or tile.shape[1] != self.tileWidth:
             extend = np.zeros(
-                (self.tileHeight, self.tileWidth, tile.shape[2]),  # type: ignore[misc]
+                (self.tileHeight, self.tileWidth, tile.shape[2]),
                 dtype=tile.dtype)
             extend[:min(self.tileHeight, tile.shape[0]),
                    :min(self.tileWidth, tile.shape[1])] = tile
@@ -2540,6 +2540,52 @@ class TileSource(IPyLeafletMixin):
             self._frameCount = len(self.getMetadata().get('frames', [])) or 1
         return self._frameCount
 
+    def frameToAxes(self, frame: int) -> Dict[str, int]:
+        """
+        Given a frame number, return a dictionary of axes values.  If unknown,
+        this is just 'frame': frame.
+
+        :param frame: a frame number.
+        :returns: a dictionary of axes that specify the frame.
+        """
+        if frame >= self.frames:
+            msg = 'frame is outside of range'
+            raise exceptions.TileSourceRangeError(msg)
+        meta = self.metadata
+        if self.frames == 1 or 'IndexStride' not in meta:
+            return {'frame': frame}
+        axes = {
+            key[5:].lower(): (frame // stride) % meta['IndexRange'][key]
+            for key, stride in meta['IndexStride'].items()}
+        return axes
+
+    def axesToFrame(self, **kwargs: int) -> int:
+        """
+        Given values on some or all of the axes, return the corresponding frame
+        number.  Any unspecified axis is 0.  If one of the specified axes is
+        'frame', this is just returned and the other values are ignored.
+
+        :param kwargs: axes with position values.
+        :returns: a frame number.
+        """
+        meta = self.metadata
+        frame = 0
+        for key, value in kwargs.items():
+            if key.lower() == 'frame':
+                if value < 0 or value >= self.frames:
+                    msg = f'{value} is out of range for frame'
+                    raise exceptions.TileSourceRangeError(msg)
+                return value
+            ikey = 'Index' + key.upper()
+            if ikey not in meta.get('IndexStride', {}):
+                msg = f'{key} is not a known axis'
+                raise exceptions.TileSourceRangeError(msg)
+            if value < 0 or value >= meta['IndexRange'][ikey]:
+                msg = f'{value} is out of range for axis {key}'
+                raise exceptions.TileSourceRangeError(msg)
+            frame += value * meta['IndexStride'][ikey]
+        return frame
+
 
 class FileTileSource(TileSource):
 

{large_image-1.30.7.dev16 → large_image-1.30.7.dev20}/large_image/tilesource/stylefuncs.py

@@ -93,9 +93,9 @@ def medianFilter(
         pimg: np.ndarray = image.astype(float)
         if len(pimg.shape) == 2:
             pimg = np.resize(pimg, (pimg.shape[0], pimg.shape[1], 1))
-        pimg = pimg[:, :, :fimg.shape[2]]  # type: ignore[index,misc]
+        pimg = pimg[:, :, :fimg.shape[2]]
         dimg = (pimg - fimg.astype(float) * mul) * weight
-        pimg = pimg[:, :, :fimg.shape[2]] + dimg  # type: ignore[index,misc]
+        pimg = pimg[:, :, :fimg.shape[2]] + dimg
         if clip:
             pimg = pimg.clip(0, clip)
         if len(image.shape) != 3:

{large_image-1.30.7.dev16 → large_image-1.30.7.dev20}/large_image/tilesource/tiledict.py

@@ -156,7 +156,7 @@ class LazyTileDict(dict):
                 elif tileData.shape[2] < retile.shape[2]:
                     retile = retile[:, :, :tileData.shape[2]]
                 retile[y0:y0 + th, x0:x0 + tw] = tileData[
-                    :th, :tw, :retile.shape[2]]  # type: ignore[misc]
+                    :th, :tw, :retile.shape[2]]
         return cast(np.ndarray, retile)
 
     def _resample(self, tileData: Union[ImageBytes, PIL.Image.Image, bytes, np.ndarray]) -> Tuple[
@@ -197,7 +197,7 @@ class LazyTileDict(dict):
             tileData = skimage.transform.resize(
                 cast(np.ndarray, tileData),
                 (self['width'], self['height'],
-                 cast(np.ndarray, tileData).shape[2]),  # type: ignore[misc]
+                 cast(np.ndarray, tileData).shape[2]),
                 order=3 if self.resample is True else self.resample)
         return tileData, pilData
 

{large_image-1.30.7.dev16 → large_image-1.30.7.dev20}/large_image/tilesource/utilities.py

@@ -213,28 +213,30 @@ def _imageToPIL(
             mode = modesBySize[image.shape[2] - 1]
         if len(image.shape) == 3 and image.shape[2] == 1:
             image = np.resize(image, image.shape[:2])
-        if image.dtype == np.uint32:
+        if cast(np.ndarray, image).dtype == np.uint32:
             image = np.floor_divide(image, 2 ** 24).astype(np.uint8)
-        elif image.dtype == np.uint16:
+        elif cast(np.ndarray, image).dtype == np.uint16:
             image = np.floor_divide(image, 256).astype(np.uint8)
-        elif image.dtype == np.int8:
-            image = (image.astype(float) + 128).astype(np.uint8)
-        elif image.dtype == np.int16:
-            image = np.floor_divide(image.astype(float) + 2 ** 15, 256).astype(np.uint8)
-        elif image.dtype == np.int32:
-            image = np.floor_divide(image.astype(float) + 2 ** 31, 2 ** 24).astype(np.uint8)
+        elif cast(np.ndarray, image).dtype == np.int8:
+            image = (cast(np.ndarray, image).astype(float) + 128).astype(np.uint8)
+        elif cast(np.ndarray, image).dtype == np.int16:
+            image = np.floor_divide(
+                cast(np.ndarray, image).astype(float) + 2 ** 15, 256).astype(np.uint8)
+        elif cast(np.ndarray, image).dtype == np.int32:
+            image = np.floor_divide(
+                cast(np.ndarray, image).astype(float) + 2 ** 31, 2 ** 24).astype(np.uint8)
         # TODO: The scaling of float data needs to be identical across all
         # tiles of an image.  This means that we need a reference to the parent
         # tile source or some other way of regulating it.
-        # elif image.dtype.kind == 'f':
+        # elif cast(np.ndarray, image).dtype.kind == 'f':
         #     if numpy.max(image) > 1:
         #         maxl2 = math.ceil(math.log(numpy.max(image) + 1) / math.log(2))
         #         image = image / ((2 ** maxl2) - 1)
         #     image = (image * 255).astype(numpy.uint8)
-        elif image.dtype != np.uint8:
+        elif cast(np.ndarray, image).dtype != np.uint8:
             image = np.clip(np.nan_to_num(np.where(
                 image is None, np.nan, image), nan=0), 0, 255).astype(np.uint8)
-        image = PIL.Image.fromarray(image, mode)
+        image = PIL.Image.fromarray(cast(np.ndarray, image), mode)
     elif not isinstance(image, PIL.Image.Image):
         image = PIL.Image.open(io.BytesIO(image))
     if setMode is not None and image.mode != setMode:
@@ -277,9 +279,10 @@ def _imageToNumpy(
             mode = modesBySize[(image.shape[2] - 1) if image.shape[2] <= 4 else 3]
             return image, mode
         mode = 'L'
-    if len(image.shape) == 2:
-        image = np.resize(image, (image.shape[0], image.shape[1], 1))
-    return image, mode
+    if len(cast(np.ndarray, image).shape) == 2:
+        image = np.resize(cast(np.ndarray, image),
+                          (cast(np.ndarray, image).shape[0], cast(np.ndarray, image).shape[1], 1))
+    return cast(np.ndarray, image), mode
 
 
 def _letterboxImage(image: PIL.Image.Image, width: int, height: int, fill: str) -> PIL.Image.Image:
@@ -811,7 +814,7 @@ def fullAlphaValue(arr: Union[np.ndarray, npt.DTypeLike]) -> int:
     if cast(np.dtype, dtype).kind == 'u':
         return np.iinfo(dtype).max
     if isinstance(arr, np.ndarray) and cast(np.dtype, dtype).kind == 'f':
-        amax = np.amax(arr)
+        amax = cast(float, np.amax(arr))
         if amax > 1 and amax < 256:
             return 255
         if amax > 1 and amax < 65536:
@@ -844,24 +847,24 @@ def _makeSameChannelDepth(arr1: np.ndarray, arr2: np.ndarray) -> Tuple[np.ndarra
     # If any array is RGB, make sure all arrays are RGB.
     for key, arr in arrays.items():
         other = arrays['arr1' if key == 'arr2' else 'arr2']
-        if arr.shape[2] < 3 and other.shape[2] >= 3:  # type: ignore[misc]
+        if arr.shape[2] < 3 and other.shape[2] >= 3:
             newarr = np.ones(
-                (arr.shape[0], arr.shape[1], arr.shape[2] + 2),  # type: ignore[misc]
+                (arr.shape[0], arr.shape[1], arr.shape[2] + 2),
                 dtype=arr.dtype)
             newarr[:, :, 0:1] = arr[:, :, 0:1]
             newarr[:, :, 1:2] = arr[:, :, 0:1]
             newarr[:, :, 2:3] = arr[:, :, 0:1]
-            if arr.shape[2] == 2:  # type: ignore[misc]
+            if arr.shape[2] == 2:
                 newarr[:, :, 3:4] = arr[:, :, 1:2]
             arrays[key] = newarr
     # If only one array has an A channel, make sure all arrays have an A
     # channel
     for key, arr in arrays.items():
         other = arrays['arr1' if key == 'arr2' else 'arr2']
-        if arr.shape[2] < other.shape[2]:  # type: ignore[misc]
+        if arr.shape[2] < other.shape[2]:
             arrays[key] = np.pad(
                 arr,
-                ((0, 0), (0, 0), (0, other.shape[2] - arr.shape[2])),  # type: ignore[misc]
+                ((0, 0), (0, 0), (0, other.shape[2] - arr.shape[2])),
                 constant_values=fullAlphaValue(arr))
     return arrays['arr1'], arrays['arr2']
 
@@ -886,7 +889,7 @@ def _addSubimageToImage(
         if (x, y, width, height) == (0, 0, subimage.shape[1], subimage.shape[0]):
             return subimage
         image = np.zeros(
-            (height, width, subimage.shape[2]),  # type: ignore[misc]
+            (height, width, subimage.shape[2]),
             dtype=subimage.dtype)
     elif len(image.shape) != len(subimage.shape) or image.shape[-1] != subimage.shape[-1]:
         image, subimage = _makeSameChannelDepth(image, subimage)
@@ -944,7 +947,7 @@ def _addRegionTileToTiled(
         subimage = subimage.astype('d')
     vimgMem = pyvips.Image.new_from_memory(
         np.ascontiguousarray(subimage).data,
-        subimage.shape[1], subimage.shape[0], subimage.shape[2],  # type: ignore[misc]
+        subimage.shape[1], subimage.shape[0], subimage.shape[2],
         dtypeToGValue[subimage.dtype.char])
     vimg = pyvips.Image.new_temp_file('%s.v')
     vimgMem.write(vimg)
@@ -955,7 +958,7 @@ def _addRegionTileToTiled(
             'mm_x': tile.get('mm_x') if tile else None,
             'mm_y': tile.get('mm_y') if tile else None,
             'magnification': tile.get('magnification') if tile else None,
-            'channels': subimage.shape[2],  # type: ignore[misc]
+            'channels': subimage.shape[2],
             'strips': {},
         }
     if y not in image['strips']:

{large_image-1.30.7.dev16 → large_image-1.30.7.dev20/large_image.egg-info}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: large-image
-Version: 1.30.7.dev16
+Version: 1.30.7.dev20
 Summary: Python modules to work with large, multiresolution images.
 Home-page: https://github.com/girder/large_image
 Author: Kitware, Inc.
@@ -30,7 +30,7 @@ Requires-Dist: pylibmc>=1.5.1; platform_system != "Windows" and extra == "memcac
 Provides-Extra: redis
 Requires-Dist: redis>=4.5.5; extra == "redis"
 Provides-Extra: converter
-Requires-Dist: large-image-converter>=1.30.7.dev16; extra == "converter"
+Requires-Dist: large-image-converter>=1.30.7.dev20; extra == "converter"
 Provides-Extra: colormaps
 Requires-Dist: matplotlib; extra == "colormaps"
 Requires-Dist: tol_colors; extra == "colormaps"
@@ -40,106 +40,106 @@ Provides-Extra: performance
 Requires-Dist: psutil>=4.2.0; extra == "performance"
 Requires-Dist: simplejpeg; extra == "performance"
 Provides-Extra: bioformats
-Requires-Dist: large-image-source-bioformats>=1.30.7.dev16; extra == "bioformats"
+Requires-Dist: large-image-source-bioformats>=1.30.7.dev20; extra == "bioformats"
 Provides-Extra: deepzoom
-Requires-Dist: large-image-source-deepzoom>=1.30.7.dev16; extra == "deepzoom"
+Requires-Dist: large-image-source-deepzoom>=1.30.7.dev20; extra == "deepzoom"
 Provides-Extra: dicom
-Requires-Dist: large-image-source-dicom>=1.30.7.dev16; extra == "dicom"
+Requires-Dist: large-image-source-dicom>=1.30.7.dev20; extra == "dicom"
 Provides-Extra: dummy
-Requires-Dist: large-image-source-dummy>=1.30.7.dev16; extra == "dummy"
+Requires-Dist: large-image-source-dummy>=1.30.7.dev20; extra == "dummy"
 Provides-Extra: gdal
-Requires-Dist: large-image-source-gdal>=1.30.7.dev16; extra == "gdal"
+Requires-Dist: large-image-source-gdal>=1.30.7.dev20; extra == "gdal"
 Provides-Extra: mapnik
-Requires-Dist: large-image-source-mapnik>=1.30.7.dev16; extra == "mapnik"
+Requires-Dist: large-image-source-mapnik>=1.30.7.dev20; extra == "mapnik"
 Provides-Extra: multi
-Requires-Dist: large-image-source-multi>=1.30.7.dev16; extra == "multi"
+Requires-Dist: large-image-source-multi>=1.30.7.dev20; extra == "multi"
 Provides-Extra: nd2
-Requires-Dist: large-image-source-nd2>=1.30.7.dev16; extra == "nd2"
+Requires-Dist: large-image-source-nd2>=1.30.7.dev20; extra == "nd2"
 Provides-Extra: ometiff
-Requires-Dist: large-image-source-ometiff>=1.30.7.dev16; extra == "ometiff"
+Requires-Dist: large-image-source-ometiff>=1.30.7.dev20; extra == "ometiff"
 Provides-Extra: openjpeg
-Requires-Dist: large-image-source-openjpeg>=1.30.7.dev16; extra == "openjpeg"
+Requires-Dist: large-image-source-openjpeg>=1.30.7.dev20; extra == "openjpeg"
 Provides-Extra: openslide
-Requires-Dist: large-image-source-openslide>=1.30.7.dev16; extra == "openslide"
+Requires-Dist: large-image-source-openslide>=1.30.7.dev20; extra == "openslide"
 Provides-Extra: pil
-Requires-Dist: large-image-source-pil>=1.30.7.dev16; extra == "pil"
+Requires-Dist: large-image-source-pil>=1.30.7.dev20; extra == "pil"
 Provides-Extra: rasterio
-Requires-Dist: large-image-source-rasterio>=1.30.7.dev16; extra == "rasterio"
+Requires-Dist: large-image-source-rasterio>=1.30.7.dev20; extra == "rasterio"
 Provides-Extra: test
-Requires-Dist: large-image-source-test>=1.30.7.dev16; extra == "test"
+Requires-Dist: large-image-source-test>=1.30.7.dev20; extra == "test"
 Provides-Extra: tiff
-Requires-Dist: large-image-source-tiff>=1.30.7.dev16; extra == "tiff"
+Requires-Dist: large-image-source-tiff>=1.30.7.dev20; extra == "tiff"
 Provides-Extra: tifffile
-Requires-Dist: large-image-source-tifffile>=1.30.7.dev16; extra == "tifffile"
+Requires-Dist: large-image-source-tifffile>=1.30.7.dev20; extra == "tifffile"
 Provides-Extra: vips
-Requires-Dist: large-image-source-vips>=1.30.7.dev16; extra == "vips"
+Requires-Dist: large-image-source-vips>=1.30.7.dev20; extra == "vips"
 Provides-Extra: zarr
-Requires-Dist: large-image-source-zarr>=1.30.7.dev16; extra == "zarr"
+Requires-Dist: large-image-source-zarr>=1.30.7.dev20; extra == "zarr"
 Provides-Extra: sources
-Requires-Dist: large-image-source-zarr>=1.30.7.dev16; extra == "sources"
-Requires-Dist: large-image-source-deepzoom>=1.30.7.dev16; extra == "sources"
-Requires-Dist: large-image-source-gdal>=1.30.7.dev16; extra == "sources"
-Requires-Dist: large-image-source-test>=1.30.7.dev16; extra == "sources"
-Requires-Dist: large-image-source-tifffile>=1.30.7.dev16; extra == "sources"
-Requires-Dist: large-image-source-bioformats>=1.30.7.dev16; extra == "sources"
-Requires-Dist: large-image-source-dicom>=1.30.7.dev16; extra == "sources"
-Requires-Dist: large-image-source-mapnik>=1.30.7.dev16; extra == "sources"
-Requires-Dist: large-image-source-nd2>=1.30.7.dev16; extra == "sources"
-Requires-Dist: large-image-source-openjpeg>=1.30.7.dev16; extra == "sources"
-Requires-Dist: large-image-source-dummy>=1.30.7.dev16; extra == "sources"
-Requires-Dist: large-image-source-multi>=1.30.7.dev16; extra == "sources"
-Requires-Dist: large-image-source-vips>=1.30.7.dev16; extra == "sources"
-Requires-Dist: large-image-source-ometiff>=1.30.7.dev16; extra == "sources"
-Requires-Dist: large-image-source-pil>=1.30.7.dev16; extra == "sources"
-Requires-Dist: large-image-source-tiff>=1.30.7.dev16; extra == "sources"
-Requires-Dist: large-image-source-rasterio>=1.30.7.dev16; extra == "sources"
-Requires-Dist: large-image-source-openslide>=1.30.7.dev16; extra == "sources"
+Requires-Dist: large-image-source-bioformats>=1.30.7.dev20; extra == "sources"
+Requires-Dist: large-image-source-ometiff>=1.30.7.dev20; extra == "sources"
+Requires-Dist: large-image-source-openslide>=1.30.7.dev20; extra == "sources"
+Requires-Dist: large-image-source-tiff>=1.30.7.dev20; extra == "sources"
+Requires-Dist: large-image-source-zarr>=1.30.7.dev20; extra == "sources"
+Requires-Dist: large-image-source-dummy>=1.30.7.dev20; extra == "sources"
+Requires-Dist: large-image-source-rasterio>=1.30.7.dev20; extra == "sources"
+Requires-Dist: large-image-source-gdal>=1.30.7.dev20; extra == "sources"
+Requires-Dist: large-image-source-mapnik>=1.30.7.dev20; extra == "sources"
+Requires-Dist: large-image-source-multi>=1.30.7.dev20; extra == "sources"
+Requires-Dist: large-image-source-deepzoom>=1.30.7.dev20; extra == "sources"
+Requires-Dist: large-image-source-openjpeg>=1.30.7.dev20; extra == "sources"
+Requires-Dist: large-image-source-test>=1.30.7.dev20; extra == "sources"
+Requires-Dist: large-image-source-dicom>=1.30.7.dev20; extra == "sources"
+Requires-Dist: large-image-source-tifffile>=1.30.7.dev20; extra == "sources"
+Requires-Dist: large-image-source-pil>=1.30.7.dev20; extra == "sources"
+Requires-Dist: large-image-source-vips>=1.30.7.dev20; extra == "sources"
+Requires-Dist: large-image-source-nd2>=1.30.7.dev20; extra == "sources"
 Provides-Extra: all
-Requires-Dist: large-image-source-zarr>=1.30.7.dev16; extra == "all"
-Requires-Dist: tol_colors; extra == "all"
-Requires-Dist: psutil>=4.2.0; extra == "all"
-Requires-Dist: large-image-source-tifffile>=1.30.7.dev16; extra == "all"
-Requires-Dist: large-image-source-dicom>=1.30.7.dev16; extra == "all"
-Requires-Dist: large-image-source-openjpeg>=1.30.7.dev16; extra == "all"
-Requires-Dist: large-image-source-nd2>=1.30.7.dev16; extra == "all"
-Requires-Dist: large-image-converter>=1.30.7.dev16; extra == "all"
-Requires-Dist: large-image-source-mapnik>=1.30.7.dev16; extra == "all"
-Requires-Dist: large-image-source-dummy>=1.30.7.dev16; extra == "all"
-Requires-Dist: large-image-source-multi>=1.30.7.dev16; extra == "all"
-Requires-Dist: large-image-source-vips>=1.30.7.dev16; extra == "all"
-Requires-Dist: large-image-source-ometiff>=1.30.7.dev16; extra == "all"
-Requires-Dist: large-image-source-rasterio>=1.30.7.dev16; extra == "all"
 Requires-Dist: matplotlib; extra == "all"
-Requires-Dist: pylibmc>=1.5.1; platform_system != "Windows" and extra == "all"
-Requires-Dist: large-image-source-deepzoom>=1.30.7.dev16; extra == "all"
-Requires-Dist: large-image-source-gdal>=1.30.7.dev16; extra == "all"
-Requires-Dist: large-image-source-test>=1.30.7.dev16; extra == "all"
+Requires-Dist: large-image-source-bioformats>=1.30.7.dev20; extra == "all"
+Requires-Dist: simplejpeg; extra == "all"
+Requires-Dist: large-image-source-gdal>=1.30.7.dev20; extra == "all"
+Requires-Dist: large-image-source-multi>=1.30.7.dev20; extra == "all"
+Requires-Dist: large-image-source-test>=1.30.7.dev20; extra == "all"
+Requires-Dist: large-image-source-pil[all]>=1.30.7.dev20; extra == "all"
+Requires-Dist: large-image-source-dicom>=1.30.7.dev20; extra == "all"
+Requires-Dist: large-image-source-tifffile>=1.30.7.dev20; extra == "all"
+Requires-Dist: large-image-source-tiff>=1.30.7.dev20; extra == "all"
+Requires-Dist: tol_colors; extra == "all"
+Requires-Dist: large-image-source-ometiff>=1.30.7.dev20; extra == "all"
+Requires-Dist: large-image-source-openslide>=1.30.7.dev20; extra == "all"
+Requires-Dist: large-image-source-vips>=1.30.7.dev20; extra == "all"
+Requires-Dist: large-image-source-dummy>=1.30.7.dev20; extra == "all"
+Requires-Dist: large-image-source-rasterio>=1.30.7.dev20; extra == "all"
+Requires-Dist: large-image-source-mapnik>=1.30.7.dev20; extra == "all"
+Requires-Dist: large-image-source-rasterio[all]>=1.30.7.dev20; extra == "all"
 Requires-Dist: redis>=4.5.5; extra == "all"
-Requires-Dist: large-image-source-tiff[all]>=1.30.7.dev16; extra == "all"
+Requires-Dist: large-image-source-deepzoom>=1.30.7.dev20; extra == "all"
+Requires-Dist: large-image-source-openjpeg>=1.30.7.dev20; extra == "all"
+Requires-Dist: large-image-converter>=1.30.7.dev20; extra == "all"
+Requires-Dist: large-image-source-tiff[all]>=1.30.7.dev20; extra == "all"
 Requires-Dist: pyvips; extra == "all"
-Requires-Dist: large-image-source-bioformats>=1.30.7.dev16; extra == "all"
-Requires-Dist: large-image-source-multi[all]>=1.30.7.dev16; extra == "all"
-Requires-Dist: large-image-source-tiff>=1.30.7.dev16; extra == "all"
-Requires-Dist: large-image-source-pil>=1.30.7.dev16; extra == "all"
-Requires-Dist: large-image-source-pil[all]>=1.30.7.dev16; extra == "all"
-Requires-Dist: large-image-source-rasterio[all]>=1.30.7.dev16; extra == "all"
-Requires-Dist: simplejpeg; extra == "all"
-Requires-Dist: large-image-source-openslide>=1.30.7.dev16; extra == "all"
+Requires-Dist: large-image-source-multi[all]>=1.30.7.dev20; extra == "all"
+Requires-Dist: large-image-source-pil>=1.30.7.dev20; extra == "all"
+Requires-Dist: psutil>=4.2.0; extra == "all"
+Requires-Dist: pylibmc>=1.5.1; platform_system != "Windows" and extra == "all"
+Requires-Dist: large-image-source-zarr>=1.30.7.dev20; extra == "all"
+Requires-Dist: large-image-source-nd2>=1.30.7.dev20; extra == "all"
 Provides-Extra: common
-Requires-Dist: large-image-source-zarr>=1.30.7.dev16; extra == "common"
-Requires-Dist: large-image-source-deepzoom>=1.30.7.dev16; extra == "common"
-Requires-Dist: large-image-source-test>=1.30.7.dev16; extra == "common"
-Requires-Dist: psutil>=4.2.0; extra == "common"
-Requires-Dist: tol_colors; extra == "common"
-Requires-Dist: large-image-source-tifffile>=1.30.7.dev16; extra == "common"
-Requires-Dist: large-image-source-dicom>=1.30.7.dev16; extra == "common"
-Requires-Dist: large-image-source-nd2>=1.30.7.dev16; extra == "common"
-Requires-Dist: large-image-source-multi>=1.30.7.dev16; extra == "common"
 Requires-Dist: matplotlib; extra == "common"
-Requires-Dist: large-image-source-pil[all]>=1.30.7.dev16; extra == "common"
-Requires-Dist: large-image-source-rasterio[all]>=1.30.7.dev16; extra == "common"
+Requires-Dist: tol_colors; extra == "common"
+Requires-Dist: large-image-source-openslide>=1.30.7.dev20; extra == "common"
 Requires-Dist: simplejpeg; extra == "common"
-Requires-Dist: large-image-source-openslide>=1.30.7.dev16; extra == "common"
+Requires-Dist: large-image-source-rasterio[all]>=1.30.7.dev20; extra == "common"
+Requires-Dist: large-image-source-multi>=1.30.7.dev20; extra == "common"
+Requires-Dist: large-image-source-deepzoom>=1.30.7.dev20; extra == "common"
+Requires-Dist: large-image-source-test>=1.30.7.dev20; extra == "common"
+Requires-Dist: large-image-source-nd2>=1.30.7.dev20; extra == "common"
+Requires-Dist: large-image-source-pil[all]>=1.30.7.dev20; extra == "common"
+Requires-Dist: large-image-source-dicom>=1.30.7.dev20; extra == "common"
+Requires-Dist: psutil>=4.2.0; extra == "common"
+Requires-Dist: large-image-source-zarr>=1.30.7.dev20; extra == "common"
+Requires-Dist: large-image-source-tifffile>=1.30.7.dev20; extra == "common"
 
 Large Image
 ===========

large_image-1.30.7.dev20/large_image.egg-info/requires.txt

@@ -0,0 +1,151 @@
+cachetools
+palettable
+Pillow
+numpy
+typing-extensions
+
+[all]
+matplotlib
+large-image-source-bioformats>=1.30.7.dev20
+simplejpeg
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+
+[colormaps]
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+[mapnik]
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+[memcached]
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+[memcached:platform_system != "Windows"]
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+[multi]
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+[openjpeg]
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+[openslide]
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+[test]
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+
+[tiff]
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+
+[tifffile]
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+
+[tiledoutput]
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+[vips]
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+
+[zarr]
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large_image-1.30.7.dev16/large_image.egg-info/requires.txt

@@ -1,151 +0,0 @@
-cachetools
-palettable
-Pillow
-numpy
-typing-extensions
-
-[all]
-large-image-source-zarr>=1.30.7.dev16
-tol_colors
-psutil>=4.2.0
-large-image-source-tifffile>=1.30.7.dev16
-large-image-source-dicom>=1.30.7.dev16
-large-image-source-openjpeg>=1.30.7.dev16
-large-image-source-nd2>=1.30.7.dev16
-large-image-converter>=1.30.7.dev16
-large-image-source-mapnik>=1.30.7.dev16
-large-image-source-dummy>=1.30.7.dev16
-large-image-source-multi>=1.30.7.dev16
-large-image-source-vips>=1.30.7.dev16
-large-image-source-ometiff>=1.30.7.dev16
-large-image-source-rasterio>=1.30.7.dev16
-matplotlib
-large-image-source-deepzoom>=1.30.7.dev16
-large-image-source-gdal>=1.30.7.dev16
-large-image-source-test>=1.30.7.dev16
-redis>=4.5.5
-large-image-source-tiff[all]>=1.30.7.dev16
-pyvips
-large-image-source-bioformats>=1.30.7.dev16
-large-image-source-multi[all]>=1.30.7.dev16
-large-image-source-tiff>=1.30.7.dev16
-large-image-source-pil>=1.30.7.dev16
-large-image-source-pil[all]>=1.30.7.dev16
-large-image-source-rasterio[all]>=1.30.7.dev16
-simplejpeg
-large-image-source-openslide>=1.30.7.dev16
-
-[all:platform_system != "Windows"]
-pylibmc>=1.5.1
-
-[bioformats]
-large-image-source-bioformats>=1.30.7.dev16
-
-[colormaps]
-matplotlib
-tol_colors
-
-[common]
-large-image-source-zarr>=1.30.7.dev16
-large-image-source-deepzoom>=1.30.7.dev16
-large-image-source-test>=1.30.7.dev16
-psutil>=4.2.0
-tol_colors
-large-image-source-tifffile>=1.30.7.dev16
-large-image-source-dicom>=1.30.7.dev16
-large-image-source-nd2>=1.30.7.dev16
-large-image-source-multi>=1.30.7.dev16
-matplotlib
-large-image-source-pil[all]>=1.30.7.dev16
-large-image-source-rasterio[all]>=1.30.7.dev16
-simplejpeg
-large-image-source-openslide>=1.30.7.dev16
-
-[converter]
-large-image-converter>=1.30.7.dev16
-
-[deepzoom]
-large-image-source-deepzoom>=1.30.7.dev16
-
-[dicom]
-large-image-source-dicom>=1.30.7.dev16
-
-[dummy]
-large-image-source-dummy>=1.30.7.dev16
-
-[gdal]
-large-image-source-gdal>=1.30.7.dev16
-
-[mapnik]
-large-image-source-mapnik>=1.30.7.dev16
-
-[memcached]
-
-[memcached:platform_system != "Windows"]
-pylibmc>=1.5.1
-
-[multi]
-large-image-source-multi>=1.30.7.dev16
-
-[nd2]
-large-image-source-nd2>=1.30.7.dev16
-
-[ometiff]
-large-image-source-ometiff>=1.30.7.dev16
-
-[openjpeg]
-large-image-source-openjpeg>=1.30.7.dev16
-
-[openslide]
-large-image-source-openslide>=1.30.7.dev16
-
-[performance]
-psutil>=4.2.0
-simplejpeg
-
-[pil]
-large-image-source-pil>=1.30.7.dev16
-
-[rasterio]
-large-image-source-rasterio>=1.30.7.dev16
-
-[redis]
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-
-[sources]
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-
-[test]
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-
-[tiff]
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-
-[tifffile]
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-
-[tiledoutput]
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-
-[vips]
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-
-[zarr]
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