large-image 1.23.5.dev2__tar.gz → 1.23.5.dev4__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (43) hide show
  1. {large-image-1.23.5.dev2/large_image.egg-info → large-image-1.23.5.dev4}/PKG-INFO +1 -1
  2. {large-image-1.23.5.dev2 → large-image-1.23.5.dev4}/large_image/tilesource/jupyter.py +14 -1
  3. {large-image-1.23.5.dev2 → large-image-1.23.5.dev4/large_image.egg-info}/PKG-INFO +1 -1
  4. large-image-1.23.5.dev4/large_image.egg-info/requires.txt +148 -0
  5. large-image-1.23.5.dev2/large_image.egg-info/requires.txt +0 -148
  6. {large-image-1.23.5.dev2 → large-image-1.23.5.dev4}/LICENSE +0 -0
  7. {large-image-1.23.5.dev2 → large-image-1.23.5.dev4}/NOTICE +0 -0
  8. {large-image-1.23.5.dev2 → large-image-1.23.5.dev4}/README.rst +0 -0
  9. {large-image-1.23.5.dev2 → large-image-1.23.5.dev4}/docs/annotations.rst +0 -0
  10. {large-image-1.23.5.dev2 → large-image-1.23.5.dev4}/docs/conf.py +0 -0
  11. {large-image-1.23.5.dev2 → large-image-1.23.5.dev4}/docs/config_options.rst +0 -0
  12. {large-image-1.23.5.dev2 → large-image-1.23.5.dev4}/docs/development.rst +0 -0
  13. {large-image-1.23.5.dev2 → large-image-1.23.5.dev4}/docs/example_usage.rst +0 -0
  14. {large-image-1.23.5.dev2 → large-image-1.23.5.dev4}/docs/girder_annotation_config_options.rst +0 -0
  15. {large-image-1.23.5.dev2 → large-image-1.23.5.dev4}/docs/girder_config_options.rst +0 -0
  16. {large-image-1.23.5.dev2 → large-image-1.23.5.dev4}/docs/image_conversion.rst +0 -0
  17. {large-image-1.23.5.dev2 → large-image-1.23.5.dev4}/docs/index.rst +0 -0
  18. {large-image-1.23.5.dev2 → large-image-1.23.5.dev4}/docs/make_docs.sh +0 -0
  19. {large-image-1.23.5.dev2 → large-image-1.23.5.dev4}/docs/multi_source_specification.rst +0 -0
  20. {large-image-1.23.5.dev2 → large-image-1.23.5.dev4}/docs/static/custom.css +0 -0
  21. {large-image-1.23.5.dev2 → large-image-1.23.5.dev4}/docs/tilesource_options.rst +0 -0
  22. {large-image-1.23.5.dev2 → large-image-1.23.5.dev4}/docs/upgrade.rst +0 -0
  23. {large-image-1.23.5.dev2 → large-image-1.23.5.dev4}/large_image/__init__.py +0 -0
  24. {large-image-1.23.5.dev2 → large-image-1.23.5.dev4}/large_image/cache_util/__init__.py +0 -0
  25. {large-image-1.23.5.dev2 → large-image-1.23.5.dev4}/large_image/cache_util/base.py +0 -0
  26. {large-image-1.23.5.dev2 → large-image-1.23.5.dev4}/large_image/cache_util/cache.py +0 -0
  27. {large-image-1.23.5.dev2 → large-image-1.23.5.dev4}/large_image/cache_util/cachefactory.py +0 -0
  28. {large-image-1.23.5.dev2 → large-image-1.23.5.dev4}/large_image/cache_util/memcache.py +0 -0
  29. {large-image-1.23.5.dev2 → large-image-1.23.5.dev4}/large_image/config.py +0 -0
  30. {large-image-1.23.5.dev2 → large-image-1.23.5.dev4}/large_image/constants.py +0 -0
  31. {large-image-1.23.5.dev2 → large-image-1.23.5.dev4}/large_image/exceptions.py +0 -0
  32. {large-image-1.23.5.dev2 → large-image-1.23.5.dev4}/large_image/tilesource/__init__.py +0 -0
  33. {large-image-1.23.5.dev2 → large-image-1.23.5.dev4}/large_image/tilesource/base.py +0 -0
  34. {large-image-1.23.5.dev2 → large-image-1.23.5.dev4}/large_image/tilesource/geo.py +0 -0
  35. {large-image-1.23.5.dev2 → large-image-1.23.5.dev4}/large_image/tilesource/stylefuncs.py +0 -0
  36. {large-image-1.23.5.dev2 → large-image-1.23.5.dev4}/large_image/tilesource/tiledict.py +0 -0
  37. {large-image-1.23.5.dev2 → large-image-1.23.5.dev4}/large_image/tilesource/utilities.py +0 -0
  38. {large-image-1.23.5.dev2 → large-image-1.23.5.dev4}/large_image.egg-info/SOURCES.txt +0 -0
  39. {large-image-1.23.5.dev2 → large-image-1.23.5.dev4}/large_image.egg-info/dependency_links.txt +0 -0
  40. {large-image-1.23.5.dev2 → large-image-1.23.5.dev4}/large_image.egg-info/not-zip-safe +0 -0
  41. {large-image-1.23.5.dev2 → large-image-1.23.5.dev4}/large_image.egg-info/top_level.txt +0 -0
  42. {large-image-1.23.5.dev2 → large-image-1.23.5.dev4}/setup.cfg +0 -0
  43. {large-image-1.23.5.dev2 → large-image-1.23.5.dev4}/setup.py +0 -0
{large-image-1.23.5.dev2/large_image.egg-info → large-image-1.23.5.dev4}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: large-image
3
- Version: 1.23.5.dev2
3
+ Version: 1.23.5.dev4
4
4
  Summary: Python modules to work with large, multiresolution images.
5
5
  Home-page: https://github.com/girder/large_image
6
6
  Author: Kitware, Inc.
{large-image-1.23.5.dev2 → large-image-1.23.5.dev4}/large_image/tilesource/jupyter.py RENAMED
@@ -19,6 +19,7 @@ import os
19
19
  import weakref
20
20
 
21
21
  from large_image.exceptions import TileSourceXYZRangeError
22
+ from large_image.tilesource.utilities import JSONDict
22
23
 
23
24
  try:
24
25
  import ipyleaflet
@@ -117,9 +118,12 @@ class Map:
117
118
  self._layer = self._map = self._metadata = None
118
119
  self._ts = ts
119
120
  if (not url or not metadata) and gc and (id or resource):
121
+ fileId = None
120
122
  if id is None:
121
123
  entry = gc.get('resource/lookup', parameters={'path': resource})
122
124
  if entry:
125
+ if entry.get('_modelType') == 'file':
126
+ fileId = entry['_id']
123
127
  id = entry['itemId'] if entry.get('_modelType') == 'file' else entry['_id']
124
128
  if id:
125
129
  try:
@@ -133,8 +137,9 @@ class Map:
133
137
  metadata = gc.get(f'item/{id}/tiles' + suffix)
134
138
  if metadata.get('geospatial') and metadata.get('projection'):
135
139
  url += suffix
140
+ self._id = id
136
141
  else:
137
- self._ts = self._get_temp_source(gc, id)
142
+ self._ts = self._get_temp_source(gc, fileId or id)
138
143
  if url and metadata:
139
144
  self._metadata = metadata
140
145
  self._url = url
@@ -275,6 +280,14 @@ class Map:
275
280
  def map(self):
276
281
  return self._map
277
282
 
283
+ @property
284
+ def metadata(self):
285
+ return JSONDict(self._metadata)
286
+
287
+ @property
288
+ def id(self):
289
+ return getattr(self, '_id', None)
290
+
278
291
  def to_map(self, coordinate):
279
292
  """
280
293
  Convert a coordinate from the image or projected image space to the map
{large-image-1.23.5.dev2 → large-image-1.23.5.dev4/large_image.egg-info}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: large-image
3
- Version: 1.23.5.dev2
3
+ Version: 1.23.5.dev4
4
4
  Summary: Python modules to work with large, multiresolution images.
5
5
  Home-page: https://github.com/girder/large_image
6
6
  Author: Kitware, Inc.
large-image-1.23.5.dev4/large_image.egg-info/requires.txt ADDED
@@ -0,0 +1,148 @@
1
+ cachetools
2
+ palettable
3
+ Pillow
4
+ numpy
5
+
6
+ [:python_version < "3.8"]
7
+ importlib-metadata<5
8
+
9
+ [all]
10
+ large-image-source-multi>=1.23.5.dev4
11
+ large-image-source-deepzoom>=1.23.5.dev4
12
+ large-image-source-tiff>=1.23.5.dev4
13
+ large-image-source-openslide>=1.23.5.dev4
14
+ matplotlib
15
+ psutil>=4.2.0
16
+ large-image-source-pil>=1.23.5.dev4
17
+ large-image-source-mapnik>=1.23.5.dev4
18
+ large-image-source-pil[all]>=1.23.5.dev4
19
+ large-image-source-openjpeg>=1.23.5.dev4
20
+ large-image-source-vips>=1.23.5.dev4
21
+ large-image-converter>=1.23.5.dev4
22
+ large-image-source-bioformats>=1.23.5.dev4
23
+ pyvips
24
+ large-image-source-dummy>=1.23.5.dev4
25
+ large-image-source-ometiff>=1.23.5.dev4
26
+ large-image-source-gdal>=1.23.5.dev4
27
+ large-image-source-test>=1.23.5.dev4
28
+
29
+ [all:platform_system != "Windows"]
30
+ pylibmc>=1.5.1
31
+
32
+ [all:python_version < "3.7"]
33
+ simplejpeg<1.6.6
34
+
35
+ [all:python_version >= "3.7"]
36
+ large-image-source-tifffile>=1.23.5.dev4
37
+ large-image-source-nd2>=1.23.5.dev4
38
+ simplejpeg
39
+
40
+ [all:python_version >= "3.8"]
41
+ large-image-source-rasterio[all]>=1.23.5.dev4
42
+ large-image-source-dicom>=1.23.5.dev4
43
+ large-image-source-rasterio>=1.23.5.dev4
44
+
45
+ [bioformats]
46
+ large-image-source-bioformats>=1.23.5.dev4
47
+
48
+ [colormaps]
49
+ matplotlib
50
+
51
+ [converter]
52
+ large-image-converter>=1.23.5.dev4
53
+
54
+ [deepzoom]
55
+ large-image-source-deepzoom>=1.23.5.dev4
56
+
57
+ [dicom]
58
+
59
+ [dicom:python_version >= "3.8"]
60
+ large-image-source-dicom>=1.23.5.dev4
61
+
62
+ [dummy]
63
+ large-image-source-dummy>=1.23.5.dev4
64
+
65
+ [gdal]
66
+ large-image-source-gdal>=1.23.5.dev4
67
+
68
+ [mapnik]
69
+ large-image-source-mapnik>=1.23.5.dev4
70
+
71
+ [memcached]
72
+
73
+ [memcached:platform_system != "Windows"]
74
+ pylibmc>=1.5.1
75
+
76
+ [multi]
77
+ large-image-source-multi>=1.23.5.dev4
78
+
79
+ [nd2]
80
+
81
+ [nd2:python_version >= "3.7"]
82
+ large-image-source-nd2>=1.23.5.dev4
83
+
84
+ [ometiff]
85
+ large-image-source-ometiff>=1.23.5.dev4
86
+
87
+ [openjpeg]
88
+ large-image-source-openjpeg>=1.23.5.dev4
89
+
90
+ [openslide]
91
+ large-image-source-openslide>=1.23.5.dev4
92
+
93
+ [performance]
94
+ psutil>=4.2.0
95
+
96
+ [performance:python_version < "3.7"]
97
+ simplejpeg<1.6.6
98
+
99
+ [performance:python_version >= "3.7"]
100
+ simplejpeg
101
+
102
+ [pil]
103
+ large-image-source-pil>=1.23.5.dev4
104
+
105
+ [rasterio]
106
+
107
+ [rasterio:python_version >= "3.8"]
108
+ large-image-source-rasterio>=1.23.5.dev4
109
+
110
+ [sources]
111
+ large-image-source-multi>=1.23.5.dev4
112
+ large-image-source-deepzoom>=1.23.5.dev4
113
+ large-image-source-tiff>=1.23.5.dev4
114
+ large-image-source-openslide>=1.23.5.dev4
115
+ large-image-source-bioformats>=1.23.5.dev4
116
+ large-image-source-dummy>=1.23.5.dev4
117
+ large-image-source-pil>=1.23.5.dev4
118
+ large-image-source-ometiff>=1.23.5.dev4
119
+ large-image-source-gdal>=1.23.5.dev4
120
+ large-image-source-vips>=1.23.5.dev4
121
+ large-image-source-mapnik>=1.23.5.dev4
122
+ large-image-source-openjpeg>=1.23.5.dev4
123
+ large-image-source-test>=1.23.5.dev4
124
+
125
+ [sources:python_version >= "3.7"]
126
+ large-image-source-tifffile>=1.23.5.dev4
127
+ large-image-source-nd2>=1.23.5.dev4
128
+
129
+ [sources:python_version >= "3.8"]
130
+ large-image-source-dicom>=1.23.5.dev4
131
+ large-image-source-rasterio>=1.23.5.dev4
132
+
133
+ [test]
134
+ large-image-source-test>=1.23.5.dev4
135
+
136
+ [tiff]
137
+ large-image-source-tiff>=1.23.5.dev4
138
+
139
+ [tifffile]
140
+
141
+ [tifffile:python_version >= "3.7"]
142
+ large-image-source-tifffile>=1.23.5.dev4
143
+
144
+ [tiledoutput]
145
+ pyvips
146
+
147
+ [vips]
148
+ large-image-source-vips>=1.23.5.dev4
large-image-1.23.5.dev2/large_image.egg-info/requires.txt DELETED
@@ -1,148 +0,0 @@
1
- cachetools
2
- palettable
3
- Pillow
4
- numpy
5
-
6
- [:python_version < "3.8"]
7
- importlib-metadata<5
8
-
9
- [all]
10
- large-image-source-bioformats>=1.23.5.dev2
11
- matplotlib
12
- large-image-source-ometiff>=1.23.5.dev2
13
- large-image-source-gdal>=1.23.5.dev2
14
- large-image-source-vips>=1.23.5.dev2
15
- large-image-source-mapnik>=1.23.5.dev2
16
- large-image-source-multi>=1.23.5.dev2
17
- large-image-source-openslide>=1.23.5.dev2
18
- large-image-source-pil[all]>=1.23.5.dev2
19
- large-image-source-test>=1.23.5.dev2
20
- large-image-source-tiff>=1.23.5.dev2
21
- pyvips
22
- large-image-converter>=1.23.5.dev2
23
- large-image-source-deepzoom>=1.23.5.dev2
24
- large-image-source-dummy>=1.23.5.dev2
25
- psutil>=4.2.0
26
- large-image-source-openjpeg>=1.23.5.dev2
27
- large-image-source-pil>=1.23.5.dev2
28
-
29
- [all:platform_system != "Windows"]
30
- pylibmc>=1.5.1
31
-
32
- [all:python_version < "3.7"]
33
- simplejpeg<1.6.6
34
-
35
- [all:python_version >= "3.7"]
36
- simplejpeg
37
- large-image-source-nd2>=1.23.5.dev2
38
- large-image-source-tifffile>=1.23.5.dev2
39
-
40
- [all:python_version >= "3.8"]
41
- large-image-source-dicom>=1.23.5.dev2
42
- large-image-source-rasterio>=1.23.5.dev2
43
- large-image-source-rasterio[all]>=1.23.5.dev2
44
-
45
- [bioformats]
46
- large-image-source-bioformats>=1.23.5.dev2
47
-
48
- [colormaps]
49
- matplotlib
50
-
51
- [converter]
52
- large-image-converter>=1.23.5.dev2
53
-
54
- [deepzoom]
55
- large-image-source-deepzoom>=1.23.5.dev2
56
-
57
- [dicom]
58
-
59
- [dicom:python_version >= "3.8"]
60
- large-image-source-dicom>=1.23.5.dev2
61
-
62
- [dummy]
63
- large-image-source-dummy>=1.23.5.dev2
64
-
65
- [gdal]
66
- large-image-source-gdal>=1.23.5.dev2
67
-
68
- [mapnik]
69
- large-image-source-mapnik>=1.23.5.dev2
70
-
71
- [memcached]
72
-
73
- [memcached:platform_system != "Windows"]
74
- pylibmc>=1.5.1
75
-
76
- [multi]
77
- large-image-source-multi>=1.23.5.dev2
78
-
79
- [nd2]
80
-
81
- [nd2:python_version >= "3.7"]
82
- large-image-source-nd2>=1.23.5.dev2
83
-
84
- [ometiff]
85
- large-image-source-ometiff>=1.23.5.dev2
86
-
87
- [openjpeg]
88
- large-image-source-openjpeg>=1.23.5.dev2
89
-
90
- [openslide]
91
- large-image-source-openslide>=1.23.5.dev2
92
-
93
- [performance]
94
- psutil>=4.2.0
95
-
96
- [performance:python_version < "3.7"]
97
- simplejpeg<1.6.6
98
-
99
- [performance:python_version >= "3.7"]
100
- simplejpeg
101
-
102
- [pil]
103
- large-image-source-pil>=1.23.5.dev2
104
-
105
- [rasterio]
106
-
107
- [rasterio:python_version >= "3.8"]
108
- large-image-source-rasterio>=1.23.5.dev2
109
-
110
- [sources]
111
- large-image-source-tiff>=1.23.5.dev2
112
- large-image-source-bioformats>=1.23.5.dev2
113
- large-image-source-ometiff>=1.23.5.dev2
114
- large-image-source-deepzoom>=1.23.5.dev2
115
- large-image-source-gdal>=1.23.5.dev2
116
- large-image-source-vips>=1.23.5.dev2
117
- large-image-source-mapnik>=1.23.5.dev2
118
- large-image-source-dummy>=1.23.5.dev2
119
- large-image-source-multi>=1.23.5.dev2
120
- large-image-source-openjpeg>=1.23.5.dev2
121
- large-image-source-openslide>=1.23.5.dev2
122
- large-image-source-pil>=1.23.5.dev2
123
- large-image-source-test>=1.23.5.dev2
124
-
125
- [sources:python_version >= "3.7"]
126
- large-image-source-tifffile>=1.23.5.dev2
127
- large-image-source-nd2>=1.23.5.dev2
128
-
129
- [sources:python_version >= "3.8"]
130
- large-image-source-dicom>=1.23.5.dev2
131
- large-image-source-rasterio>=1.23.5.dev2
132
-
133
- [test]
134
- large-image-source-test>=1.23.5.dev2
135
-
136
- [tiff]
137
- large-image-source-tiff>=1.23.5.dev2
138
-
139
- [tifffile]
140
-
141
- [tifffile:python_version >= "3.7"]
142
- large-image-source-tifffile>=1.23.5.dev2
143
-
144
- [tiledoutput]
145
- pyvips
146
-
147
- [vips]
148
- large-image-source-vips>=1.23.5.dev2