large-image-source-zarr 1.31.1.dev6__tar.gz → 1.31.1.dev10__tar.gz

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Files changed (14) hide show
  1. {large_image_source_zarr-1.31.1.dev6 → large_image_source_zarr-1.31.1.dev10}/PKG-INFO +3 -3
  2. {large_image_source_zarr-1.31.1.dev6 → large_image_source_zarr-1.31.1.dev10}/large_image_source_zarr/__init__.py +14 -2
  3. {large_image_source_zarr-1.31.1.dev6 → large_image_source_zarr-1.31.1.dev10}/large_image_source_zarr.egg-info/PKG-INFO +3 -3
  4. {large_image_source_zarr-1.31.1.dev6 → large_image_source_zarr-1.31.1.dev10}/large_image_source_zarr.egg-info/requires.txt +2 -2
  5. {large_image_source_zarr-1.31.1.dev6 → large_image_source_zarr-1.31.1.dev10}/LICENSE +0 -0
  6. {large_image_source_zarr-1.31.1.dev6 → large_image_source_zarr-1.31.1.dev10}/README.rst +0 -0
  7. {large_image_source_zarr-1.31.1.dev6 → large_image_source_zarr-1.31.1.dev10}/large_image_source_zarr/girder_source.py +0 -0
  8. {large_image_source_zarr-1.31.1.dev6 → large_image_source_zarr-1.31.1.dev10}/large_image_source_zarr.egg-info/SOURCES.txt +0 -0
  9. {large_image_source_zarr-1.31.1.dev6 → large_image_source_zarr-1.31.1.dev10}/large_image_source_zarr.egg-info/dependency_links.txt +0 -0
  10. {large_image_source_zarr-1.31.1.dev6 → large_image_source_zarr-1.31.1.dev10}/large_image_source_zarr.egg-info/entry_points.txt +0 -0
  11. {large_image_source_zarr-1.31.1.dev6 → large_image_source_zarr-1.31.1.dev10}/large_image_source_zarr.egg-info/top_level.txt +0 -0
  12. {large_image_source_zarr-1.31.1.dev6 → large_image_source_zarr-1.31.1.dev10}/pyproject.toml +0 -0
  13. {large_image_source_zarr-1.31.1.dev6 → large_image_source_zarr-1.31.1.dev10}/setup.cfg +0 -0
  14. {large_image_source_zarr-1.31.1.dev6 → large_image_source_zarr-1.31.1.dev10}/setup.py +0 -0
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: large-image-source-zarr
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- Version: 1.31.1.dev6
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+ Version: 1.31.1.dev10
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  Summary: A OME Zarr tilesource for large_image.
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  Home-page: https://github.com/girder/large_image
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  Author: Kitware, Inc.
@@ -19,12 +19,12 @@ Classifier: Programming Language :: Python :: 3.13
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  Requires-Python: >=3.6
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  Description-Content-Type: text/x-rst
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  License-File: LICENSE
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- Requires-Dist: large-image>=1.31.1.dev6
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+ Requires-Dist: large-image>=1.31.1.dev10
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  Requires-Dist: zarr<3
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  Requires-Dist: numcodecs
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  Requires-Dist: imagecodecs-numcodecs!=2024.9.22
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  Provides-Extra: girder
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- Requires-Dist: girder-large-image>=1.31.1.dev6; extra == "girder"
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+ Requires-Dist: girder-large-image>=1.31.1.dev10; extra == "girder"
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  Provides-Extra: all
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  Requires-Dist: large-image-converter; extra == "all"
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@@ -689,7 +689,9 @@ class ZarrFileTileSource(FileTileSource, metaclass=LruCacheMetaclass):
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  arr,
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  [(0, s - arr.shape[i]) for i, s in enumerate(new_shape)],
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  )
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- new_arr = zarr.empty(new_shape, chunks=chunking, dtype=arr.dtype)
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+ new_arr = zarr.empty(
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+ new_shape, chunks=chunking, dtype=arr.dtype,
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+ write_empty_chunks=False)
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  new_arr[:] = arr[:]
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  arr = new_arr
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  else:
@@ -765,12 +767,22 @@ class ZarrFileTileSource(FileTileSource, metaclass=LruCacheMetaclass):
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  self._zarr_store.rmdir(path)
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  chunking = None
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  if store_path not in current_arrays:
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- arr = np.empty(tuple(new_dims.values()), dtype=tile.dtype)
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  chunking = tuple([
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  self._tileSize if a in ['x', 'y'] else
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  new_dims.get('s') if a == 's' else 1
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  for a in axes
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  ])
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+ # If we have to create the array, do so with the desired store
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+ # and chunking so we don't have to immediately rechunk it
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+ arr = zarr.empty(
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+ tuple(new_dims.values()),
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+ dtype=tile.dtype,
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+ chunks=chunking,
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+ store=self._zarr_store,
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+ path=store_path,
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+ write_empty_chunks=False,
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+ )
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+ chunking = None
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  else:
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  arr = current_arrays[store_path]
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  new_shape = tuple(
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: large-image-source-zarr
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- Version: 1.31.1.dev6
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+ Version: 1.31.1.dev10
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  Summary: A OME Zarr tilesource for large_image.
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  Home-page: https://github.com/girder/large_image
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  Author: Kitware, Inc.
@@ -19,12 +19,12 @@ Classifier: Programming Language :: Python :: 3.13
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  Requires-Python: >=3.6
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  Description-Content-Type: text/x-rst
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  License-File: LICENSE
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- Requires-Dist: large-image>=1.31.1.dev6
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+ Requires-Dist: large-image>=1.31.1.dev10
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  Requires-Dist: zarr<3
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  Requires-Dist: numcodecs
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  Requires-Dist: imagecodecs-numcodecs!=2024.9.22
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  Provides-Extra: girder
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- Requires-Dist: girder-large-image>=1.31.1.dev6; extra == "girder"
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+ Requires-Dist: girder-large-image>=1.31.1.dev10; extra == "girder"
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  Provides-Extra: all
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  Requires-Dist: large-image-converter; extra == "all"
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@@ -1,4 +1,4 @@
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- large-image>=1.31.1.dev6
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+ large-image>=1.31.1.dev10
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  zarr<3
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  numcodecs
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  imagecodecs-numcodecs!=2024.9.22
@@ -7,4 +7,4 @@ imagecodecs-numcodecs!=2024.9.22
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  large-image-converter
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  [girder]
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- girder-large-image>=1.31.1.dev6
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+ girder-large-image>=1.31.1.dev10