large-image-source-openslide 1.24.1.dev21__tar.gz → 1.24.1.dev33__tar.gz

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Files changed (13) hide show
  1. {large-image-source-openslide-1.24.1.dev21 → large-image-source-openslide-1.24.1.dev33}/PKG-INFO +1 -1
  2. {large-image-source-openslide-1.24.1.dev21 → large-image-source-openslide-1.24.1.dev33}/large_image_source_openslide/__init__.py +4 -13
  3. {large-image-source-openslide-1.24.1.dev21 → large-image-source-openslide-1.24.1.dev33}/large_image_source_openslide.egg-info/PKG-INFO +1 -1
  4. {large-image-source-openslide-1.24.1.dev21 → large-image-source-openslide-1.24.1.dev33}/large_image_source_openslide.egg-info/requires.txt +2 -2
  5. {large-image-source-openslide-1.24.1.dev21 → large-image-source-openslide-1.24.1.dev33}/LICENSE +0 -0
  6. {large-image-source-openslide-1.24.1.dev21 → large-image-source-openslide-1.24.1.dev33}/README.rst +0 -0
  7. {large-image-source-openslide-1.24.1.dev21 → large-image-source-openslide-1.24.1.dev33}/large_image_source_openslide/girder_source.py +0 -0
  8. {large-image-source-openslide-1.24.1.dev21 → large-image-source-openslide-1.24.1.dev33}/large_image_source_openslide.egg-info/SOURCES.txt +0 -0
  9. {large-image-source-openslide-1.24.1.dev21 → large-image-source-openslide-1.24.1.dev33}/large_image_source_openslide.egg-info/dependency_links.txt +0 -0
  10. {large-image-source-openslide-1.24.1.dev21 → large-image-source-openslide-1.24.1.dev33}/large_image_source_openslide.egg-info/entry_points.txt +0 -0
  11. {large-image-source-openslide-1.24.1.dev21 → large-image-source-openslide-1.24.1.dev33}/large_image_source_openslide.egg-info/top_level.txt +0 -0
  12. {large-image-source-openslide-1.24.1.dev21 → large-image-source-openslide-1.24.1.dev33}/setup.cfg +0 -0
  13. {large-image-source-openslide-1.24.1.dev21 → large-image-source-openslide-1.24.1.dev33}/setup.py +0 -0
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: large-image-source-openslide
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- Version: 1.24.1.dev21
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+ Version: 1.24.1.dev33
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  Summary: An Openslide tilesource for large_image.
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  Home-page: https://github.com/girder/large_image
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  Author: Kitware, Inc.
@@ -14,6 +14,7 @@
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  # limitations under the License.
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  ##############################################################################
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+ import io
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  import math
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  import os
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@@ -26,12 +27,6 @@ from large_image.constants import TILE_FORMAT_PIL, SourcePriority
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  from large_image.exceptions import TileSourceError, TileSourceFileNotFoundError
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  from large_image.tilesource import FileTileSource, nearPowerOfTwo
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- try:
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- from libtiff import libtiff_ctypes
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- except ImportError:
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- libtiff_ctypes = False
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-
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-
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  try:
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  from importlib.metadata import PackageNotFoundError
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  from importlib.metadata import version as _importlib_version
@@ -376,13 +371,9 @@ class OpenslideFileTileSource(FileTileSource, metaclass=LruCacheMetaclass):
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  # Reopen handle after a lowlevel error
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  self._openslide = openslide.OpenSlide(self._largeImagePath)
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  return None
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- bytePath = self._largeImagePath
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- if not isinstance(bytePath, bytes):
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- bytePath = bytePath.encode()
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- _tiffFile = libtiff_ctypes.TIFF.open(bytePath)
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- _tiffFile.SetDirectory(images[imageKey])
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- img = _tiffFile.read_image()
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- return PIL.Image.fromarray(img)
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+ tiff_buffer = io.BytesIO()
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+ tifftools.write_tiff(self._tiffinfo['ifds'][images[imageKey]], tiff_buffer)
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+ return PIL.Image.open(tiff_buffer)
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  def open(*args, **kwargs):
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: large-image-source-openslide
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- Version: 1.24.1.dev21
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+ Version: 1.24.1.dev33
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  Summary: An Openslide tilesource for large_image.
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  Home-page: https://github.com/girder/large_image
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  Author: Kitware, Inc.
@@ -1,4 +1,4 @@
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- large-image>=1.24.1.dev21
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+ large-image>=1.24.1.dev33
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  openslide-python>=1.1.0
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  tifftools>=1.2.0
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@@ -6,4 +6,4 @@ tifftools>=1.2.0
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  importlib-metadata<5
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  [girder]
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- girder-large-image>=1.24.1.dev21
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+ girder-large-image>=1.24.1.dev33