large-image-source-multi 1.30.5__tar.gz → 1.30.5.dev2__tar.gz

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Files changed (16) hide show
  1. {large_image_source_multi-1.30.5/large_image_source_multi.egg-info → large_image_source_multi-1.30.5.dev2}/PKG-INFO +3 -3
  2. {large_image_source_multi-1.30.5 → large_image_source_multi-1.30.5.dev2}/large_image_source_multi/__init__.py +4 -12
  3. {large_image_source_multi-1.30.5 → large_image_source_multi-1.30.5.dev2/large_image_source_multi.egg-info}/PKG-INFO +3 -3
  4. large_image_source_multi-1.30.5.dev2/large_image_source_multi.egg-info/requires.txt +9 -0
  5. large_image_source_multi-1.30.5/large_image_source_multi.egg-info/requires.txt +0 -9
  6. {large_image_source_multi-1.30.5 → large_image_source_multi-1.30.5.dev2}/LICENSE +0 -0
  7. {large_image_source_multi-1.30.5 → large_image_source_multi-1.30.5.dev2}/README.rst +0 -0
  8. {large_image_source_multi-1.30.5 → large_image_source_multi-1.30.5.dev2}/docs/specification.rst +0 -0
  9. {large_image_source_multi-1.30.5 → large_image_source_multi-1.30.5.dev2}/large_image_source_multi/girder_source.py +0 -0
  10. {large_image_source_multi-1.30.5 → large_image_source_multi-1.30.5.dev2}/large_image_source_multi.egg-info/SOURCES.txt +0 -0
  11. {large_image_source_multi-1.30.5 → large_image_source_multi-1.30.5.dev2}/large_image_source_multi.egg-info/dependency_links.txt +0 -0
  12. {large_image_source_multi-1.30.5 → large_image_source_multi-1.30.5.dev2}/large_image_source_multi.egg-info/entry_points.txt +0 -0
  13. {large_image_source_multi-1.30.5 → large_image_source_multi-1.30.5.dev2}/large_image_source_multi.egg-info/top_level.txt +0 -0
  14. {large_image_source_multi-1.30.5 → large_image_source_multi-1.30.5.dev2}/pyproject.toml +0 -0
  15. {large_image_source_multi-1.30.5 → large_image_source_multi-1.30.5.dev2}/setup.cfg +0 -0
  16. {large_image_source_multi-1.30.5 → large_image_source_multi-1.30.5.dev2}/setup.py +0 -0
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: large-image-source-multi
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- Version: 1.30.5
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+ Version: 1.30.5.dev2
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  Summary: A tilesource for large_image to composite other tile sources
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  Home-page: https://github.com/girder/large_image
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  Author: Kitware, Inc.
@@ -20,12 +20,12 @@ Requires-Python: >=3.6
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  Description-Content-Type: text/x-rst
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  License-File: LICENSE
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  Requires-Dist: jsonschema
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- Requires-Dist: large-image>=1.30.5
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+ Requires-Dist: large-image>=1.30.5.dev2
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  Requires-Dist: pyyaml
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  Provides-Extra: all
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  Requires-Dist: scikit-image; extra == "all"
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  Provides-Extra: girder
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- Requires-Dist: girder-large-image>=1.30.5; extra == "girder"
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+ Requires-Dist: girder-large-image>=1.30.5.dev2; extra == "girder"
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  A tilesource for large_image to composite other tile sources
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@@ -1037,8 +1037,7 @@ class MultiFileTileSource(FileTileSource, metaclass=LruCacheMetaclass):
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  base[y:y + tile.shape[0], x:x + tile.shape[1], :] = tile
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  return base
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- def _getTransformedTile(self, ts, transform, corners, scale, frame,
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- crop=None, firstMerge=False):
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+ def _getTransformedTile(self, ts, transform, corners, scale, frame, crop=None):
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  """
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  Determine where the target tile's corners are located on the source.
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  Fetch that so that we have at least sqrt(2) more resolution, then use
@@ -1055,9 +1054,6 @@ class MultiFileTileSource(FileTileSource, metaclass=LruCacheMetaclass):
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  :param crop: an optional dictionary to crop the source image in full
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  resolution, untransformed coordinates. This may contain left, top,
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  right, and bottom values in pixels.
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- :param firstMerge: if False and using an alpha channel, transform
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- with nearest neighbor rather than a higher order function to
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- avoid transparency effects.
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  :returns: a numpy array tile or None, x, y coordinates within the
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  target tile for the placement of the numpy tile array.
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  """
@@ -1149,12 +1145,9 @@ class MultiFileTileSource(FileTileSource, metaclass=LruCacheMetaclass):
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  destShape = [min(destShape[0], outh - y), min(destShape[1], outw - x)]
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  if destShape[0] <= 0 or destShape[1] <= 0:
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  return None, None, None
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- # Add an alpha band if needed. This has to be done before the
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- # transform if it isn't the first tile, since the unused transformed
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- # areas need to have a zero alpha value
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+ # Add an alpha band if needed
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  if srcImage.shape[2] in {1, 3}:
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  _, srcImage = _makeSameChannelDepth(np.zeros((1, 1, srcImage.shape[2] + 1)), srcImage)
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- useNearest = srcImage.shape[2] in {2, 4} and not firstMerge
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  # skimage.transform.warp is faster and has less artifacts than
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  # scipy.ndimage.affine_transform. It is faster than using cupy's
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  # version of scipy's affine_transform when the source and destination
@@ -1164,7 +1157,7 @@ class MultiFileTileSource(FileTileSource, metaclass=LruCacheMetaclass):
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  # provide any speed improvement
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  srcImage.astype(float),
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  skimage.transform.AffineTransform(np.linalg.inv(transform)),
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- order=0 if useNearest else 3,
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+ order=3,
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  output_shape=(destShape[0], destShape[1], srcImage.shape[2]),
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  ).astype(srcImage.dtype)
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  return destImage, x, y
@@ -1241,8 +1234,7 @@ class MultiFileTileSource(FileTileSource, metaclass=LruCacheMetaclass):
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  else:
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  sourceTile, x, y = self._getTransformedTile(
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  ts, transform, corners, scale, sourceEntry.get('frame', 0),
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- source.get('position', {}).get('crop'),
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- firstMerge=tile is None)
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+ source.get('position', {}).get('crop'))
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  if sourceTile is not None and all(dim > 0 for dim in sourceTile.shape):
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  targetDtype = np.dtype(self._info.get('dtype', ts.dtype))
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  changeDtype = sourceTile.dtype != targetDtype
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: large-image-source-multi
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- Version: 1.30.5
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+ Version: 1.30.5.dev2
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  Summary: A tilesource for large_image to composite other tile sources
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  Home-page: https://github.com/girder/large_image
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  Author: Kitware, Inc.
@@ -20,12 +20,12 @@ Requires-Python: >=3.6
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  Description-Content-Type: text/x-rst
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  License-File: LICENSE
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  Requires-Dist: jsonschema
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- Requires-Dist: large-image>=1.30.5
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+ Requires-Dist: large-image>=1.30.5.dev2
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  Requires-Dist: pyyaml
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  Provides-Extra: all
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  Requires-Dist: scikit-image; extra == "all"
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  Provides-Extra: girder
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- Requires-Dist: girder-large-image>=1.30.5; extra == "girder"
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+ Requires-Dist: girder-large-image>=1.30.5.dev2; extra == "girder"
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  A tilesource for large_image to composite other tile sources
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@@ -0,0 +1,9 @@
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+ jsonschema
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+ large-image>=1.30.5.dev2
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+ pyyaml
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+
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+ [all]
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+ scikit-image
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+
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+ [girder]
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+ girder-large-image>=1.30.5.dev2
@@ -1,9 +0,0 @@
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- jsonschema
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- large-image>=1.30.5
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- pyyaml
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-
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- [all]
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- scikit-image
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-
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- [girder]
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- girder-large-image>=1.30.5