large-image-source-bioformats 1.27.5.dev61__tar.gz → 1.27.5.dev67__tar.gz

{large-image-source-bioformats-1.27.5.dev61 → large-image-source-bioformats-1.27.5.dev67}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: large-image-source-bioformats
-Version: 1.27.5.dev61
+Version: 1.27.5.dev67
 Summary: An bioformats tilesource for large_image.
 Home-page: https://github.com/girder/large_image
 Author: Kitware, Inc.

{large-image-source-bioformats-1.27.5.dev61 → large-image-source-bioformats-1.27.5.dev67}/large_image_source_bioformats/__init__.py

@@ -221,7 +221,21 @@ class BioformatsFileTileSource(FileTileSource, metaclass=LruCacheMetaclass):
         try:
             javabridge.attach()
             try:
-                self._bioimage = bioformats.ImageReader(largeImagePath)
+                self._bioimage = bioformats.ImageReader(largeImagePath, perform_init=False)
+                try:
+                    # So this as a separate step so, if it fails, we can ask to
+                    # open something that does not exist and bioformats will
+                    # release some file handles.
+                    self._bioimage.init_reader()
+                except Exception as exc:
+                    try:
+                        # Ask to open a file that should never exist
+                        self._bioimage.rdr.setId('__\0__')
+                    except Exception:
+                        pass
+                    self._bioimage.close()
+                    self._bioimage = None
+                    raise exc
             except (AttributeError, OSError) as exc:
                 if not os.path.isfile(largeImagePath):
                     raise TileSourceFileNotFoundError(largeImagePath) from None

{large-image-source-bioformats-1.27.5.dev61 → large-image-source-bioformats-1.27.5.dev67}/large_image_source_bioformats.egg-info/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: large-image-source-bioformats
-Version: 1.27.5.dev61
+Version: 1.27.5.dev67
 Summary: An bioformats tilesource for large_image.
 Home-page: https://github.com/girder/large_image
 Author: Kitware, Inc.

large-image-source-bioformats-1.27.5.dev67/large_image_source_bioformats.egg-info/requires.txt

@@ -0,0 +1,5 @@
+large-image>=1.27.5.dev67
+python-bioformats>=1.5.2
+
+[girder]
+girder-large-image>=1.27.5.dev67

large-image-source-bioformats-1.27.5.dev61/large_image_source_bioformats.egg-info/requires.txt

@@ -1,5 +0,0 @@
-large-image>=1.27.5.dev61
-python-bioformats>=1.5.2
-
-[girder]
-girder-large-image>=1.27.5.dev61