lamindb_setup 0.74.0__tar.gz → 0.74.1__tar.gz

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Files changed (92) hide show
  1. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/PKG-INFO +2 -1
  2. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/lamindb_setup/__init__.py +1 -1
  3. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/lamindb_setup/_connect_instance.py +0 -6
  4. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/lamindb_setup/_schema_metadata.py +4 -4
  5. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/pyproject.toml +1 -0
  6. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/tests/hub-local/test_update_schema_in_hub.py +6 -6
  7. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/.github/workflows/build.yml +0 -0
  8. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/.github/workflows/doc-changes.yml +0 -0
  9. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/.gitignore +0 -0
  10. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/.pre-commit-config.yaml +0 -0
  11. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/LICENSE +0 -0
  12. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/README.md +0 -0
  13. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/docs/changelog.md +0 -0
  14. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/docs/hub-cloud/01-init-local-instance.ipynb +0 -0
  15. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/docs/hub-cloud/02-connect-local-instance.ipynb +0 -0
  16. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/docs/hub-cloud/03-add-managed-storage.ipynb +0 -0
  17. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/docs/hub-cloud/04-test-bionty.ipynb +0 -0
  18. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/docs/hub-cloud/05-init-hosted-instance.ipynb +0 -0
  19. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/docs/hub-cloud/06-connect-hosted-instance.ipynb +0 -0
  20. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/docs/hub-cloud/07-keep-artifacts-local.ipynb +0 -0
  21. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/docs/hub-cloud/test-multi-session.ipynb +0 -0
  22. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/docs/hub-cloud/test_notebooks.py +0 -0
  23. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/docs/hub-prod/test-cache-management.ipynb +0 -0
  24. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/docs/hub-prod/test-cloud-sync.ipynb +0 -0
  25. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/docs/hub-prod/test-connect-anonymously.ipynb +0 -0
  26. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/docs/hub-prod/test-empty-init.ipynb +0 -0
  27. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/docs/hub-prod/test-import-schema.ipynb +0 -0
  28. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/docs/hub-prod/test-insufficient-user-info.ipynb +0 -0
  29. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/docs/hub-prod/test-invalid-schema.ipynb +0 -0
  30. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/docs/hub-prod/test-sqlite-lock.ipynb +0 -0
  31. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/docs/hub-prod/test_notebooks2.py +0 -0
  32. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/docs/index.md +0 -0
  33. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/docs/notebooks.md +0 -0
  34. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/docs/reference.md +0 -0
  35. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/lamindb_setup/_cache.py +0 -0
  36. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/lamindb_setup/_check.py +0 -0
  37. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/lamindb_setup/_check_setup.py +0 -0
  38. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/lamindb_setup/_close.py +0 -0
  39. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/lamindb_setup/_delete.py +0 -0
  40. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/lamindb_setup/_django.py +0 -0
  41. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/lamindb_setup/_exportdb.py +0 -0
  42. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/lamindb_setup/_importdb.py +0 -0
  43. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/lamindb_setup/_init_instance.py +0 -0
  44. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/lamindb_setup/_migrate.py +0 -0
  45. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/lamindb_setup/_register_instance.py +0 -0
  46. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/lamindb_setup/_schema.py +0 -0
  47. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/lamindb_setup/_set_managed_storage.py +0 -0
  48. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/lamindb_setup/_setup_user.py +0 -0
  49. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/lamindb_setup/_silence_loggers.py +0 -0
  50. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/lamindb_setup/core/__init__.py +0 -0
  51. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/lamindb_setup/core/_aws_credentials.py +0 -0
  52. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/lamindb_setup/core/_aws_storage.py +0 -0
  53. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/lamindb_setup/core/_deprecated.py +0 -0
  54. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/lamindb_setup/core/_docs.py +0 -0
  55. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/lamindb_setup/core/_hub_client.py +0 -0
  56. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/lamindb_setup/core/_hub_core.py +0 -0
  57. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/lamindb_setup/core/_hub_crud.py +0 -0
  58. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/lamindb_setup/core/_hub_utils.py +0 -0
  59. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/lamindb_setup/core/_private_django_api.py +0 -0
  60. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/lamindb_setup/core/_settings.py +0 -0
  61. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/lamindb_setup/core/_settings_instance.py +0 -0
  62. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/lamindb_setup/core/_settings_load.py +0 -0
  63. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/lamindb_setup/core/_settings_save.py +0 -0
  64. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/lamindb_setup/core/_settings_storage.py +0 -0
  65. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/lamindb_setup/core/_settings_store.py +0 -0
  66. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/lamindb_setup/core/_settings_user.py +0 -0
  67. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/lamindb_setup/core/_setup_bionty_sources.py +0 -0
  68. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/lamindb_setup/core/cloud_sqlite_locker.py +0 -0
  69. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/lamindb_setup/core/django.py +0 -0
  70. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/lamindb_setup/core/exceptions.py +0 -0
  71. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/lamindb_setup/core/hashing.py +0 -0
  72. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/lamindb_setup/core/types.py +0 -0
  73. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/lamindb_setup/core/upath.py +0 -0
  74. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/noxfile.py +0 -0
  75. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/tests/hub-cloud/test_connect_instance.py +0 -0
  76. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/tests/hub-cloud/test_delete_instance.py +0 -0
  77. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/tests/hub-cloud/test_init_instance.py +0 -0
  78. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/tests/hub-cloud/test_login.py +0 -0
  79. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/tests/hub-cloud/test_migrate.py +0 -0
  80. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/tests/hub-cloud/test_set_storage.py +0 -0
  81. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/tests/hub-local/conftest.py +0 -0
  82. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/tests/hub-local/test_all.py +0 -0
  83. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/tests/hub-prod/conftest.py +0 -0
  84. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/tests/hub-prod/test_django.py +0 -0
  85. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/tests/hub-prod/test_global_settings.py +0 -0
  86. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/tests/hub-prod/test_switch_and_fallback_env.py +0 -0
  87. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/tests/hub-prod/test_upath.py +0 -0
  88. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/tests/storage/test_hashing.py +0 -0
  89. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/tests/storage/test_storage_access.py +0 -0
  90. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/tests/storage/test_storage_basis.py +0 -0
  91. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/tests/storage/test_storage_stats.py +0 -0
  92. {lamindb_setup-0.74.0 → lamindb_setup-0.74.1}/tests/storage/test_to_url.py +0 -0
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: lamindb_setup
3
- Version: 0.74.0
3
+ Version: 0.74.1
4
4
  Summary: Setup & configure LaminDB.
5
5
  Author-email: Lamin Labs <laminlabs@gmail.com>
6
6
  Description-Content-Type: text/markdown
@@ -14,6 +14,7 @@ Requires-Dist: requests
14
14
  Requires-Dist: universal_pathlib==0.2.2
15
15
  Requires-Dist: botocore<2.0.0
16
16
  Requires-Dist: supabase==2.2.1
17
+ Requires-Dist: psutil
17
18
  Requires-Dist: urllib3<2 ; extra == "aws"
18
19
  Requires-Dist: aiobotocore[boto3]>=2.5.4,<3.0.0 ; extra == "aws"
19
20
  Requires-Dist: s3fs>=2023.12.2,<=2024.3.1 ; extra == "aws"
@@ -34,7 +34,7 @@ Modules & settings:
34
34
 
35
35
  """
36
36
 
37
- __version__ = "0.74.0" # denote a release candidate for 0.1.0 with 0.1rc1
37
+ __version__ = "0.74.1" # denote a release candidate for 0.1.0 with 0.1rc1
38
38
 
39
39
  import sys
40
40
  from os import name as _os_name
@@ -270,12 +270,6 @@ def load(
270
270
  This is exactly the same as ``ln.connect()`` except for that
271
271
  ``ln.connect()`` doesn't change the state of ``auto-connect``.
272
272
  """
273
- # enable the message in the next release
274
- logger.warning(
275
- "`lamin connect` replaces `lamin load`, which will be removed in a future"
276
- " version\nif you still want to auto-connect to an instance upon lamindb"
277
- " import, call: `lamin load` on the CLI"
278
- )
279
273
  result = connect(slug, db=db, storage=storage)
280
274
  settings.auto_connect = True
281
275
  return result
@@ -113,7 +113,7 @@ class Through(BaseModel):
113
113
 
114
114
  class FieldMetadata(BaseModel):
115
115
  type: Type
116
- column: str | None = None
116
+ column_name: str | None = None
117
117
  through: Through | None = None
118
118
  field_name: str
119
119
  model_name: str
@@ -249,7 +249,7 @@ class _ModelHandler:
249
249
  field_name=field_name,
250
250
  type=internal_type,
251
251
  is_link_table=issubclass(field.model, LinkORM),
252
- column=column,
252
+ column_name=column,
253
253
  relation_type=relation_type,
254
254
  related_schema_name=related_schema_name,
255
255
  related_model_name=related_model_name,
@@ -355,8 +355,8 @@ class _SchemaHandler:
355
355
  for model in self._get_schema_module(
356
356
  module_name
357
357
  ).models.__dict__.values()
358
- if model.__class__.__name__ == "RegistryMeta"
359
- and model.__name__ not in ["Registry", "ORM"]
358
+ if model.__class__.__name__ == "RecordMeta"
359
+ and model.__name__ not in ["Record", "ORM"]
360
360
  and not model._meta.abstract
361
361
  and model.__get_schema_name__() == module_name
362
362
  }
@@ -19,6 +19,7 @@ dependencies = [
19
19
  "universal_pathlib==0.2.2", # is still experimental, need pinning
20
20
  "botocore<2.0.0",
21
21
  "supabase==2.2.1",
22
+ "psutil"
22
23
  ]
23
24
 
24
25
  [project.urls]
@@ -43,7 +43,7 @@ def test_update_schema_in_hub(setup_instance):
43
43
 
44
44
  assert schema["schema_json"]["core"]["artifact"]["fields"]["id"] == {
45
45
  "type": "AutoField",
46
- "column": "id",
46
+ "column_name": "id",
47
47
  "through": None,
48
48
  "field_name": "id",
49
49
  "model_name": "artifact",
@@ -57,7 +57,7 @@ def test_update_schema_in_hub(setup_instance):
57
57
 
58
58
  assert schema["schema_json"]["core"]["artifact"]["fields"]["created_by"] == {
59
59
  "type": "ForeignKey",
60
- "column": "created_by_id",
60
+ "column_name": "created_by_id",
61
61
  "through": {
62
62
  "left_key": "created_by_id",
63
63
  "right_key": "id",
@@ -75,7 +75,7 @@ def test_update_schema_in_hub(setup_instance):
75
75
 
76
76
  assert schema["schema_json"]["bionty"]["gene"]["fields"]["pathways"] == {
77
77
  "type": "ManyToManyField",
78
- "column": None,
78
+ "column_name": None,
79
79
  "through": {
80
80
  "left_key": "gene_id",
81
81
  "right_key": "pathway_id",
@@ -93,7 +93,7 @@ def test_update_schema_in_hub(setup_instance):
93
93
 
94
94
  assert schema["schema_json"]["wetlab"]["well"]["fields"]["artifacts"] == {
95
95
  "type": "ManyToManyField",
96
- "column": None,
96
+ "column_name": None,
97
97
  "through": {
98
98
  "left_key": "well_id",
99
99
  "right_key": "artifact_id",
@@ -111,7 +111,7 @@ def test_update_schema_in_hub(setup_instance):
111
111
 
112
112
  assert schema["schema_json"]["core"]["transform"]["fields"]["parents"] == {
113
113
  "type": "ManyToManyField",
114
- "column": None,
114
+ "column_name": None,
115
115
  "through": {
116
116
  "left_key": "from_transform_id",
117
117
  "right_key": "to_transform_id",
@@ -129,7 +129,7 @@ def test_update_schema_in_hub(setup_instance):
129
129
 
130
130
  assert schema["schema_json"]["core"]["transform"]["fields"]["children"] == {
131
131
  "type": "ManyToManyField",
132
- "column": None,
132
+ "column_name": None,
133
133
  "through": {
134
134
  "left_key": "to_transform_id",
135
135
  "right_key": "from_transform_id",
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