lamindb 0.69.0__tar.gz → 0.69.2__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (385) hide show
  1. {lamindb-0.69.0 → lamindb-0.69.2}/.github/workflows/build.yml +8 -13
  2. {lamindb-0.69.0 → lamindb-0.69.2}/PKG-INFO +6 -6
  3. {lamindb-0.69.0 → lamindb-0.69.2}/README.md +1 -1
  4. {lamindb-0.69.0 → lamindb-0.69.2}/docs/changelog.md +11 -0
  5. {lamindb-0.69.0 → lamindb-0.69.2}/docs/faq.md +0 -1
  6. {lamindb-0.69.0 → lamindb-0.69.2}/docs/introduction.ipynb +203 -460
  7. {lamindb-0.69.0 → lamindb-0.69.2}/docs/meta.ipynb +2 -22
  8. {lamindb-0.69.0 → lamindb-0.69.2}/docs/storage/transfer-local-to-cloud.ipynb +1 -1
  9. {lamindb-0.69.0 → lamindb-0.69.2}/docs/track.ipynb +2 -1
  10. {lamindb-0.69.0 → lamindb-0.69.2}/docs/tutorial.ipynb +4 -4
  11. {lamindb-0.69.0 → lamindb-0.69.2}/docs/validate.ipynb +1 -24
  12. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/__init__.py +4 -21
  13. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/_artifact.py +4 -12
  14. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/_collection.py +16 -4
  15. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/_feature.py +11 -9
  16. lamindb-0.69.0/sub/lamin-cli/lamin_cli/_save.py → lamindb-0.69.2/lamindb/_finish.py +85 -50
  17. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/_query_set.py +3 -1
  18. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/_run.py +3 -1
  19. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/_save.py +34 -21
  20. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/core/_data.py +3 -0
  21. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/core/_feature_manager.py +4 -3
  22. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/core/_run_context.py +17 -5
  23. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/core/storage/_backed_access.py +48 -11
  24. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/core/storage/file.py +2 -7
  25. lamindb-0.69.2/lamindb/validation/__init__.py +19 -0
  26. lamindb-0.69.2/lamindb/validation/_anndata_validator.py +117 -0
  27. lamindb-0.69.2/lamindb/validation/_lookup.py +42 -0
  28. lamindb-0.69.2/lamindb/validation/_register.py +265 -0
  29. lamindb-0.69.2/lamindb/validation/_validate.py +139 -0
  30. lamindb-0.69.2/lamindb/validation/_validator.py +221 -0
  31. {lamindb-0.69.0 → lamindb-0.69.2}/noxfile.py +10 -12
  32. {lamindb-0.69.0 → lamindb-0.69.2}/pyproject.toml +6 -6
  33. lamindb-0.69.2/sub/lamin-cli/lamin_cli/__init__.py +3 -0
  34. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamin-cli/lamin_cli/__main__.py +2 -2
  35. lamindb-0.69.2/sub/lamin-cli/lamin_cli/_save.py +49 -0
  36. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamin-cli/tests/notebooks/with-title-and-initialized-non-consecutive.ipynb +2 -2
  37. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamin-cli/tests/test_save_notebooks.py +22 -3
  38. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/.github/workflows/build.yml +0 -5
  39. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/docs/changelog.md +5 -0
  40. lamindb-0.69.0/sub/lamindb-setup/docs/hub-prod/test-sqlite-sync.ipynb → lamindb-0.69.2/sub/lamindb-setup/docs/hub-prod/test-cloud-sync.ipynb +232 -11
  41. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/docs/hub-prod/test-connect-anonymously.ipynb +12 -2
  42. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/docs/hub-prod/test-sqlite-lock.ipynb +4 -1
  43. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/docs/notebooks.md +1 -1
  44. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/lamindb_setup/__init__.py +1 -1
  45. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/lamindb_setup/_delete.py +3 -1
  46. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/lamindb_setup/core/_hub_core.py +36 -12
  47. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/lamindb_setup/core/_hub_crud.py +12 -0
  48. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/lamindb_setup/core/_settings_save.py +4 -2
  49. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/lamindb_setup/core/_settings_storage.py +11 -0
  50. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/lamindb_setup/core/cloud_sqlite_locker.py +1 -10
  51. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/lamindb_setup/core/upath.py +102 -44
  52. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/pyproject.toml +0 -1
  53. lamindb-0.69.2/sub/lamindb-setup/tests/hub-local/conftest.py +78 -0
  54. lamindb-0.69.0/sub/lamindb-setup/tests/hub-local/test_storage_deletion_gate.py → lamindb-0.69.2/sub/lamindb-setup/tests/hub-local/test_check_s3_storage_empty.py +5 -5
  55. lamindb-0.69.2/sub/lamindb-setup/tests/hub-local/test_hosted_instance_deletion_gate.py +32 -0
  56. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/CHANGELOG.md +2 -0
  57. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/__init__.py +1 -1
  58. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/models.py +32 -15
  59. {lamindb-0.69.0 → lamindb-0.69.2}/tests/test_artifact.py +11 -17
  60. {lamindb-0.69.0 → lamindb-0.69.2}/tests/test_cache.py +53 -1
  61. {lamindb-0.69.0 → lamindb-0.69.2}/tests/test_collection.py +4 -1
  62. {lamindb-0.69.0 → lamindb-0.69.2}/tests/test_run_context.py +2 -2
  63. {lamindb-0.69.0 → lamindb-0.69.2}/tests/test_save.py +2 -4
  64. {lamindb-0.69.0 → lamindb-0.69.2}/tests/test_storage.py +8 -4
  65. lamindb-0.69.2/tests/test_validator.py +91 -0
  66. lamindb-0.69.0/docs/faq/validator.ipynb +0 -195
  67. lamindb-0.69.0/lamindb/_finish.py +0 -39
  68. lamindb-0.69.0/sub/lamin-cli/lamin_cli/__init__.py +0 -3
  69. lamindb-0.69.0/sub/lamindb-setup/tests/hub-local/conftest.py +0 -25
  70. {lamindb-0.69.0 → lamindb-0.69.2}/.github/workflows/latest-changes.jinja2 +0 -0
  71. {lamindb-0.69.0 → lamindb-0.69.2}/.github/workflows/latest-changes.yml +0 -0
  72. {lamindb-0.69.0 → lamindb-0.69.2}/.gitignore +0 -0
  73. {lamindb-0.69.0 → lamindb-0.69.2}/.gitmodules +0 -0
  74. {lamindb-0.69.0 → lamindb-0.69.2}/.pre-commit-config.yaml +0 -0
  75. {lamindb-0.69.0 → lamindb-0.69.2}/LICENSE +0 -0
  76. {lamindb-0.69.0 → lamindb-0.69.2}/docs/annotate.ipynb +0 -0
  77. {lamindb-0.69.0 → lamindb-0.69.2}/docs/bio-registries.ipynb +0 -0
  78. {lamindb-0.69.0 → lamindb-0.69.2}/docs/bionty-base.md +0 -0
  79. {lamindb-0.69.0 → lamindb-0.69.2}/docs/bionty.md +0 -0
  80. {lamindb-0.69.0 → lamindb-0.69.2}/docs/data.ipynb +0 -0
  81. {lamindb-0.69.0 → lamindb-0.69.2}/docs/faq/acid.ipynb +0 -0
  82. {lamindb-0.69.0 → lamindb-0.69.2}/docs/faq/delete.ipynb +0 -0
  83. {lamindb-0.69.0 → lamindb-0.69.2}/docs/faq/idempotency.ipynb +0 -0
  84. {lamindb-0.69.0 → lamindb-0.69.2}/docs/faq/import-schema.ipynb +0 -0
  85. {lamindb-0.69.0 → lamindb-0.69.2}/docs/faq/key.ipynb +0 -0
  86. {lamindb-0.69.0 → lamindb-0.69.2}/docs/faq/reference-field.ipynb +0 -0
  87. {lamindb-0.69.0 → lamindb-0.69.2}/docs/faq/setup.ipynb +0 -0
  88. {lamindb-0.69.0 → lamindb-0.69.2}/docs/faq/test_notebooks.py +0 -0
  89. {lamindb-0.69.0 → lamindb-0.69.2}/docs/faq/track-run-inputs.ipynb +0 -0
  90. {lamindb-0.69.0 → lamindb-0.69.2}/docs/faq/visibility.ipynb +0 -0
  91. {lamindb-0.69.0 → lamindb-0.69.2}/docs/features-lamindb.md +0 -0
  92. {lamindb-0.69.0 → lamindb-0.69.2}/docs/features-laminhub.md +0 -0
  93. {lamindb-0.69.0 → lamindb-0.69.2}/docs/guide.md +0 -0
  94. {lamindb-0.69.0 → lamindb-0.69.2}/docs/index.md +0 -0
  95. {lamindb-0.69.0 → lamindb-0.69.2}/docs/installation.md +0 -0
  96. {lamindb-0.69.0 → lamindb-0.69.2}/docs/lamin-utils.md +0 -0
  97. {lamindb-0.69.0 → lamindb-0.69.2}/docs/lamindb.md +0 -0
  98. {lamindb-0.69.0 → lamindb-0.69.2}/docs/nbproject.md +0 -0
  99. {lamindb-0.69.0 → lamindb-0.69.2}/docs/query-search.md +0 -0
  100. {lamindb-0.69.0 → lamindb-0.69.2}/docs/readfcs.md +0 -0
  101. {lamindb-0.69.0 → lamindb-0.69.2}/docs/reference.md +0 -0
  102. {lamindb-0.69.0 → lamindb-0.69.2}/docs/schemas.ipynb +0 -0
  103. {lamindb-0.69.0 → lamindb-0.69.2}/docs/setup.ipynb +0 -0
  104. {lamindb-0.69.0 → lamindb-0.69.2}/docs/signup-login.md +0 -0
  105. {lamindb-0.69.0 → lamindb-0.69.2}/docs/storage/add-replace-stage.ipynb +0 -0
  106. {lamindb-0.69.0 → lamindb-0.69.2}/docs/storage/anndata-accessor.ipynb +0 -0
  107. {lamindb-0.69.0 → lamindb-0.69.2}/docs/storage/prepare-transfer-local-to-cloud.ipynb +0 -0
  108. {lamindb-0.69.0 → lamindb-0.69.2}/docs/storage/test-files/iris.csv +0 -0
  109. {lamindb-0.69.0 → lamindb-0.69.2}/docs/storage/test-files/iris.data +0 -0
  110. {lamindb-0.69.0 → lamindb-0.69.2}/docs/storage/test-files/new_iris.csv +0 -0
  111. {lamindb-0.69.0 → lamindb-0.69.2}/docs/storage/test_notebooks.py +0 -0
  112. {lamindb-0.69.0 → lamindb-0.69.2}/docs/storage/upload.ipynb +0 -0
  113. {lamindb-0.69.0 → lamindb-0.69.2}/docs/storage.md +0 -0
  114. {lamindb-0.69.0 → lamindb-0.69.2}/docs/test_notebooks.py +0 -0
  115. {lamindb-0.69.0 → lamindb-0.69.2}/docs/transfer.ipynb +0 -0
  116. {lamindb-0.69.0 → lamindb-0.69.2}/docs/tutorial2.ipynb +0 -0
  117. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/_feature_set.py +0 -0
  118. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/_filter.py +0 -0
  119. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/_from_values.py +0 -0
  120. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/_is_versioned.py +0 -0
  121. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/_parents.py +0 -0
  122. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/_query_manager.py +0 -0
  123. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/_registry.py +0 -0
  124. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/_storage.py +0 -0
  125. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/_transform.py +0 -0
  126. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/_ulabel.py +0 -0
  127. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/_utils.py +0 -0
  128. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/_validate.py +0 -0
  129. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/_view.py +0 -0
  130. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/core/__init__.py +0 -0
  131. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/core/_label_manager.py +0 -0
  132. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/core/_mapped_collection.py +0 -0
  133. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/core/_settings.py +0 -0
  134. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/core/_sync_git.py +0 -0
  135. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/core/_track_environment.py +0 -0
  136. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/core/_transform_settings.py +0 -0
  137. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/core/_view_tree.py +0 -0
  138. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/core/datasets/__init__.py +0 -0
  139. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/core/datasets/_core.py +0 -0
  140. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/core/datasets/_fake.py +0 -0
  141. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/core/exceptions.py +0 -0
  142. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/core/fields.py +0 -0
  143. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/core/storage/__init__.py +0 -0
  144. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/core/storage/_anndata_sizes.py +0 -0
  145. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/core/storage/_zarr.py +0 -0
  146. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/core/storage/object.py +0 -0
  147. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/core/types.py +0 -0
  148. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/core/versioning.py +0 -0
  149. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/setup/__init__.py +0 -0
  150. {lamindb-0.69.0 → lamindb-0.69.2}/lamindb/setup/core/__init__.py +0 -0
  151. {lamindb-0.69.0 → lamindb-0.69.2}/sub/bionty/.github/workflows/build.yml +0 -0
  152. {lamindb-0.69.0 → lamindb-0.69.2}/sub/bionty/.github/workflows/latest-changes.jinja2 +0 -0
  153. {lamindb-0.69.0 → lamindb-0.69.2}/sub/bionty/.github/workflows/latest-changes.yml +0 -0
  154. {lamindb-0.69.0 → lamindb-0.69.2}/sub/bionty/.gitignore +0 -0
  155. {lamindb-0.69.0 → lamindb-0.69.2}/sub/bionty/.pre-commit-config.yaml +0 -0
  156. {lamindb-0.69.0 → lamindb-0.69.2}/sub/bionty/LICENSE +0 -0
  157. {lamindb-0.69.0 → lamindb-0.69.2}/sub/bionty/README.md +0 -0
  158. {lamindb-0.69.0 → lamindb-0.69.2}/sub/bionty/bionty/__init__.py +0 -0
  159. {lamindb-0.69.0 → lamindb-0.69.2}/sub/bionty/bionty/core/__init__.py +0 -0
  160. {lamindb-0.69.0 → lamindb-0.69.2}/sub/bionty/docs/changelog.md +0 -0
  161. {lamindb-0.69.0 → lamindb-0.69.2}/sub/bionty/docs/index.md +0 -0
  162. {lamindb-0.69.0 → lamindb-0.69.2}/sub/bionty/docs/reference.md +0 -0
  163. {lamindb-0.69.0 → lamindb-0.69.2}/sub/bionty/lamin-project.yaml +0 -0
  164. {lamindb-0.69.0 → lamindb-0.69.2}/sub/bionty/noxfile.py +0 -0
  165. {lamindb-0.69.0 → lamindb-0.69.2}/sub/bionty/pyproject.toml +0 -0
  166. {lamindb-0.69.0 → lamindb-0.69.2}/sub/bionty/tests/test_notebooks.py +0 -0
  167. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamin-cli/.gitignore +0 -0
  168. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamin-cli/.pre-commit-config.yaml +0 -0
  169. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamin-cli/README.md +0 -0
  170. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamin-cli/lamin_cli/_cache.py +0 -0
  171. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamin-cli/lamin_cli/_migration.py +0 -0
  172. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamin-cli/lamin_cli/_stage.py +0 -0
  173. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamin-cli/pyproject.toml +0 -0
  174. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamin-cli/tests/conftest.py +0 -0
  175. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamin-cli/tests/notebooks/not-initialized.ipynb +0 -0
  176. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamin-cli/tests/notebooks/with-title-and-initialized-consecutive.ipynb +0 -0
  177. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamin-cli/tests/scripts/initialized.py +0 -0
  178. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamin-cli/tests/test_cli.py +0 -0
  179. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamin-cli/tests/test_migrate.py +0 -0
  180. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamin-cli/tests/test_save_scripts.py +0 -0
  181. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamin-cli/tests/test_stage.py +0 -0
  182. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/.github/workflows/latest-changes.jinja2 +0 -0
  183. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/.github/workflows/latest-changes.yml +0 -0
  184. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/.gitignore +0 -0
  185. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/.pre-commit-config.yaml +0 -0
  186. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/LICENSE +0 -0
  187. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/README.md +0 -0
  188. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/docs/hub-cloud/01-init-on-prem-instance.ipynb +0 -0
  189. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/docs/hub-cloud/02-connect-on-prem-instance.ipynb +0 -0
  190. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/docs/hub-cloud/03-set-storage.ipynb +0 -0
  191. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/docs/hub-cloud/04-test-bionty.ipynb +0 -0
  192. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/docs/hub-cloud/05-init-hosted-instance.ipynb +0 -0
  193. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/docs/hub-cloud/06-connect-hosted-instance.ipynb +0 -0
  194. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/docs/hub-cloud/test-multi-session.ipynb +0 -0
  195. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/docs/hub-cloud/test_notebooks.py +0 -0
  196. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/docs/hub-prod/test-cache-management.ipynb +0 -0
  197. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/docs/hub-prod/test-empty-init.ipynb +0 -0
  198. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/docs/hub-prod/test-import-schema.ipynb +0 -0
  199. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/docs/hub-prod/test-insufficient-user-info.ipynb +0 -0
  200. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/docs/hub-prod/test-invalid-schema.ipynb +0 -0
  201. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/docs/hub-prod/test_notebooks2.py +0 -0
  202. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/docs/index.md +0 -0
  203. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/docs/reference.md +0 -0
  204. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/lamindb_setup/_add_remote_storage.py +0 -0
  205. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/lamindb_setup/_cache.py +0 -0
  206. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/lamindb_setup/_check.py +0 -0
  207. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/lamindb_setup/_check_setup.py +0 -0
  208. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/lamindb_setup/_close.py +0 -0
  209. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/lamindb_setup/_connect_instance.py +0 -0
  210. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/lamindb_setup/_django.py +0 -0
  211. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/lamindb_setup/_exportdb.py +0 -0
  212. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/lamindb_setup/_importdb.py +0 -0
  213. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/lamindb_setup/_init_instance.py +0 -0
  214. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/lamindb_setup/_migrate.py +0 -0
  215. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/lamindb_setup/_register_instance.py +0 -0
  216. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/lamindb_setup/_schema.py +0 -0
  217. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/lamindb_setup/_setup_user.py +0 -0
  218. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/lamindb_setup/_silence_loggers.py +0 -0
  219. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/lamindb_setup/core/__init__.py +0 -0
  220. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/lamindb_setup/core/_aws_storage.py +0 -0
  221. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/lamindb_setup/core/_deprecated.py +0 -0
  222. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/lamindb_setup/core/_docs.py +0 -0
  223. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/lamindb_setup/core/_hub_client.py +0 -0
  224. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/lamindb_setup/core/_hub_utils.py +0 -0
  225. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/lamindb_setup/core/_settings.py +0 -0
  226. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/lamindb_setup/core/_settings_instance.py +0 -0
  227. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/lamindb_setup/core/_settings_load.py +0 -0
  228. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/lamindb_setup/core/_settings_store.py +0 -0
  229. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/lamindb_setup/core/_settings_user.py +0 -0
  230. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/lamindb_setup/core/_setup_bionty_sources.py +0 -0
  231. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/lamindb_setup/core/django.py +0 -0
  232. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/lamindb_setup/core/exceptions.py +0 -0
  233. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/lamindb_setup/core/hashing.py +0 -0
  234. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/lamindb_setup/core/types.py +0 -0
  235. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/noxfile.py +0 -0
  236. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/tests/hub-cloud/test_connect_instance.py +0 -0
  237. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/tests/hub-cloud/test_delete_instance.py +0 -0
  238. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/tests/hub-cloud/test_init_instance.py +0 -0
  239. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/tests/hub-cloud/test_login.py +0 -0
  240. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/tests/hub-cloud/test_migrate.py +0 -0
  241. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/tests/hub-cloud/test_set_storage.py +0 -0
  242. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/tests/hub-local/test_all.py +0 -0
  243. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/tests/hub-prod/conftest.py +0 -0
  244. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/tests/hub-prod/test_auto_connect.py +0 -0
  245. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/tests/hub-prod/test_django.py +0 -0
  246. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/tests/hub-prod/test_switch_and_fallback_env.py +0 -0
  247. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/tests/hub-prod/test_upath.py +0 -0
  248. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/tests/storage/test_hashing.py +0 -0
  249. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/tests/storage/test_storage_access.py +0 -0
  250. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lamindb-setup/tests/storage/test_storage_stats.py +0 -0
  251. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/.github/workflows/build.yml +0 -0
  252. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/.github/workflows/latest-changes.jinja2 +0 -0
  253. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/.github/workflows/latest-changes.yml +0 -0
  254. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/.gitignore +0 -0
  255. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/.pre-commit-config.yaml +0 -0
  256. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/LICENSE +0 -0
  257. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/README.md +0 -0
  258. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/docs/changelog.md +0 -0
  259. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/docs/index.md +0 -0
  260. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/docs/reference.md +0 -0
  261. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/lamin-project.yaml +0 -0
  262. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/lnschema_bionty/__init__.py +0 -0
  263. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/lnschema_bionty/_bionty.py +0 -0
  264. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/lnschema_bionty/core/__init__.py +0 -0
  265. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/lnschema_bionty/core/_bionty.py +0 -0
  266. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/lnschema_bionty/core/_settings.py +0 -0
  267. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/lnschema_bionty/ids.py +0 -0
  268. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/lnschema_bionty/migrations/0001_initial.py +0 -0
  269. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/lnschema_bionty/migrations/0001_initial_squashed_0016.py +0 -0
  270. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/lnschema_bionty/migrations/0002_rename_gene_type_gene_biotype_and_more.py +0 -0
  271. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/lnschema_bionty/migrations/0003_alter_biontysource_entity_alter_biontysource_source_and_more.py +0 -0
  272. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/lnschema_bionty/migrations/0004_alter_cellline_bionty_source_and_more.py +0 -0
  273. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/lnschema_bionty/migrations/0005_rename_short_name_cellline_abbr_and_more.py +0 -0
  274. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/lnschema_bionty/migrations/0006_alter_biontysource_options_alter_cellline_options_and_more.py +0 -0
  275. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/lnschema_bionty/migrations/0007_rename_readout_experimental_factor.py +0 -0
  276. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/lnschema_bionty/migrations/0008_remove_gene_hgnc_id_remove_gene_mgi_id_and_more.py +0 -0
  277. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/lnschema_bionty/migrations/0009_alter_gene_ensembl_gene_id.py +0 -0
  278. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/lnschema_bionty/migrations/0010_alter_species_name.py +0 -0
  279. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/lnschema_bionty/migrations/0011_cellline_datasets_cellmarker_datasets_and_more.py +0 -0
  280. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/lnschema_bionty/migrations/0012_gene_stable_id.py +0 -0
  281. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/lnschema_bionty/migrations/0013_alter_cellmarker_species_alter_gene_species_and_more.py +0 -0
  282. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/lnschema_bionty/migrations/0014_ethnicity_developmentalstage.py +0 -0
  283. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/lnschema_bionty/migrations/0015_migrate_to_integer_pks.py +0 -0
  284. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/lnschema_bionty/migrations/0016_export_legacy_data.py +0 -0
  285. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/lnschema_bionty/migrations/0017_import_legacy_data.py +0 -0
  286. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/lnschema_bionty/migrations/0018_organism_rename_species_biontysource_organism_and_more.py +0 -0
  287. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/lnschema_bionty/migrations/0019_rename_taxon_id_organism_ontology_id_and_more.py +0 -0
  288. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/lnschema_bionty/migrations/0020_alter_organism_bionty_source.py +0 -0
  289. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/lnschema_bionty/migrations/0021_rename_files_cellline_artifacts_and_more.py +0 -0
  290. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/lnschema_bionty/migrations/0022_rename_datasets_cellline_collections_and_more.py +0 -0
  291. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/lnschema_bionty/migrations/0023_rename_publicsource_encode_uid.py +0 -0
  292. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/lnschema_bionty/migrations/__init__.py +0 -0
  293. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/lnschema_bionty/models.py +0 -0
  294. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/noxfile.py +0 -0
  295. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/pyproject.toml +0 -0
  296. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-bionty/tests/test_integrity.py +0 -0
  297. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/.github/workflows/build.yml +0 -0
  298. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/.github/workflows/latest-changes.jinja2 +0 -0
  299. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/.github/workflows/latest-changes.yml +0 -0
  300. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/.gitignore +0 -0
  301. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/.pre-commit-config.yaml +0 -0
  302. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/LICENSE +0 -0
  303. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/README.md +0 -0
  304. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/ids.py +0 -0
  305. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/0001_initial.py +0 -0
  306. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/0001_initial_squashed_0023.py +0 -0
  307. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/0002_alter_user_name.py +0 -0
  308. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/0003_alter_storage_region_alter_transform_short_name.py +0 -0
  309. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/0004_rename_folder_tag_alter_project_folders.py +0 -0
  310. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/0005_alter_run_inputs_delete_runinput.py +0 -0
  311. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/0006_feature_dataset.py +0 -0
  312. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/0007_feature_synonyms_featureset_field_and_more.py +0 -0
  313. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/0008_file_hash_type_transform_parents.py +0 -0
  314. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/0009_remove_featureset_files_feature_unit_and_more.py +0 -0
  315. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/0010_dataset_categories_file_categories.py +0 -0
  316. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/0011_label_remove_tag_created_by_remove_tag_parents_and_more.py +0 -0
  317. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/0012_remove_label_ref_id_remove_label_ref_orm_and_more.py +0 -0
  318. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/0013_remove_feature_labels_orm_and_more.py +0 -0
  319. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/0014_rename_ref_field_featureset_registry.py +0 -0
  320. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/0015_file_initial_version_file_version.py +0 -0
  321. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/0016_dataset_input_of_dataset_run_dataset_transform_and_more.py +0 -0
  322. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/0017_dataset_initial_version_dataset_version.py +0 -0
  323. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/0018_rename_datasetlabel_datasetulabel_and_more.py +0 -0
  324. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/0019_dataset_reference_dataset_reference_type_and_more.py +0 -0
  325. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/0020_run_report_transform_latest_report_and_more.py +0 -0
  326. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/0021_dataset_storage_alter_dataset_file.py +0 -0
  327. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/0022_migrate_to_integer_pks.py +0 -0
  328. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/0023_export_legacy_data.py +0 -0
  329. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/0024_import_legacy_data.py +0 -0
  330. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/0025_remove_user_email.py +0 -0
  331. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/0026_dataset_visibility_file_visibility.py +0 -0
  332. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/0027_file_key_is_virtual.py +0 -0
  333. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/0028_alter_dataset_visibility_alter_file_visibility.py +0 -0
  334. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/0029_remove_feature_modality_remove_featureset_modality_and_more.py +0 -0
  335. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/0030_alter_dataset_visibility_alter_file_visibility.py +0 -0
  336. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/0031_rename_file_to_artifact.py +0 -0
  337. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/0032_remove_dataset_storage.py +0 -0
  338. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/0033_alter_artifact_unique_together_artifact_n_objects_and_more.py +0 -0
  339. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/0034_run_environment.py +0 -0
  340. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/0035_remove_artifact_initial_version_and_more.py +0 -0
  341. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/0036_storage_description.py +0 -0
  342. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/0037_rename_dataset_to_collection.py +0 -0
  343. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/0038_alter_collection_artifact_alter_collection_artifacts_and_more.py +0 -0
  344. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/0039_remove_collection_artifacts_collectionartifact_and_more.py +0 -0
  345. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/0040_alter_transform_type.py +0 -0
  346. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/0041_remove_transform_short_name_transform_description_and_more.py +0 -0
  347. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/0042_rename_run_at_run_started_at_run_finished_at.py +0 -0
  348. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/0043_run_json.py +0 -0
  349. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/migrations/__init__.py +0 -0
  350. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/mocks.py +0 -0
  351. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/types.py +0 -0
  352. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/lnschema_core/users.py +0 -0
  353. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/noxfile.py +0 -0
  354. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/pyproject.toml +0 -0
  355. {lamindb-0.69.0 → lamindb-0.69.2}/sub/lnschema-core/tests/test_integrity.py +0 -0
  356. {lamindb-0.69.0 → lamindb-0.69.2}/tests/conftest.py +0 -0
  357. {lamindb-0.69.0 → lamindb-0.69.2}/tests/notebooks/initialized-with-nbproject.ipynb +0 -0
  358. {lamindb-0.69.0 → lamindb-0.69.2}/tests/notebooks/no-title.ipynb +0 -0
  359. {lamindb-0.69.0 → lamindb-0.69.2}/tests/notebooks/not-initialized.ipynb +0 -0
  360. {lamindb-0.69.0 → lamindb-0.69.2}/tests/notebooks/with-title-initialized-consecutive-finish-not-last-cell.ipynb +0 -0
  361. {lamindb-0.69.0 → lamindb-0.69.2}/tests/notebooks/with-title-initialized-consecutive-finish.ipynb +0 -0
  362. {lamindb-0.69.0 → lamindb-0.69.2}/tests/test_data.py +0 -0
  363. {lamindb-0.69.0 → lamindb-0.69.2}/tests/test_db.py +0 -0
  364. {lamindb-0.69.0 → lamindb-0.69.2}/tests/test_delete.py +0 -0
  365. {lamindb-0.69.0 → lamindb-0.69.2}/tests/test_feature.py +0 -0
  366. {lamindb-0.69.0 → lamindb-0.69.2}/tests/test_feature_manager.py +0 -0
  367. {lamindb-0.69.0 → lamindb-0.69.2}/tests/test_feature_set.py +0 -0
  368. {lamindb-0.69.0 → lamindb-0.69.2}/tests/test_from_values.py +0 -0
  369. {lamindb-0.69.0 → lamindb-0.69.2}/tests/test_label_manager.py +0 -0
  370. {lamindb-0.69.0 → lamindb-0.69.2}/tests/test_load.py +0 -0
  371. {lamindb-0.69.0 → lamindb-0.69.2}/tests/test_manager.py +0 -0
  372. {lamindb-0.69.0 → lamindb-0.69.2}/tests/test_notebooks.py +0 -0
  373. {lamindb-0.69.0 → lamindb-0.69.2}/tests/test_parents.py +0 -0
  374. {lamindb-0.69.0 → lamindb-0.69.2}/tests/test_queryset.py +0 -0
  375. {lamindb-0.69.0 → lamindb-0.69.2}/tests/test_registry.py +0 -0
  376. {lamindb-0.69.0 → lamindb-0.69.2}/tests/test_run.py +0 -0
  377. {lamindb-0.69.0 → lamindb-0.69.2}/tests/test_settings.py +0 -0
  378. {lamindb-0.69.0 → lamindb-0.69.2}/tests/test_transfer.py +0 -0
  379. {lamindb-0.69.0 → lamindb-0.69.2}/tests/test_transform.py +0 -0
  380. {lamindb-0.69.0 → lamindb-0.69.2}/tests/test_uid.py +0 -0
  381. {lamindb-0.69.0 → lamindb-0.69.2}/tests/test_ulabel.py +0 -0
  382. {lamindb-0.69.0 → lamindb-0.69.2}/tests/test_validate.py +0 -0
  383. {lamindb-0.69.0 → lamindb-0.69.2}/tests/test_versioning.py +0 -0
  384. {lamindb-0.69.0 → lamindb-0.69.2}/tests/test_view.py +0 -0
  385. {lamindb-0.69.0 → lamindb-0.69.2}/tests/test_visibility.py +0 -0
@@ -29,11 +29,9 @@ jobs:
29
29
  with:
30
30
  submodules: recursive
31
31
  fetch-depth: 0
32
- - uses: actions/setup-python@v4
32
+ - uses: actions/setup-python@v5
33
33
  with:
34
- python-version: "3.10"
35
- cache: "pip"
36
- cache-dependency-path: ".github/workflows/build.yml"
34
+ python-version: "3.11"
37
35
  - name: cache pre-commit
38
36
  uses: actions/cache@v3
39
37
  with:
@@ -100,11 +98,9 @@ jobs:
100
98
  aws-access-key-id: ${{ secrets.AWS_ACCESS_KEY_ID }}
101
99
  aws-secret-access-key: ${{ secrets.AWS_SECRET_ACCESS_KEY }}
102
100
  aws-region: us-east-1
103
- - uses: actions/setup-python@v4
101
+ - uses: actions/setup-python@v5
104
102
  with:
105
103
  python-version: "3.10"
106
- cache: "pip"
107
- cache-dependency-path: ".github/workflows/build.yml"
108
104
  - run: pip install -U laminci
109
105
  - run: nox -s "install(group='docs')"
110
106
  - uses: actions/download-artifact@v2
@@ -124,14 +120,13 @@ jobs:
124
120
  runs-on: ubuntu-latest
125
121
  steps:
126
122
  - uses: actions/checkout@v4
127
- - uses: actions/setup-python@v4
123
+ - uses: actions/setup-python@v5
128
124
  with:
129
- python-version: 3.9
130
- cache: "pip"
131
- cache-dependency-path: ".github/workflows/build.yml"
125
+ python-version: "3.11"
132
126
  - run: |
133
- pip install coverage[toml]
134
- pip install --no-deps .
127
+ python -m pip install -U uv
128
+ uv pip install --system coverage[toml]
129
+ uv pip install --system --no-deps .
135
130
  - uses: actions/download-artifact@v2
136
131
  - name: run coverage
137
132
  run: |
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: lamindb
3
- Version: 0.69.0
3
+ Version: 0.69.2
4
4
  Summary: A data framework for biology.
5
5
  Author-email: Lamin Labs <open-source@lamin.ai>
6
6
  Requires-Python: >=3.8
@@ -9,10 +9,10 @@ Classifier: Programming Language :: Python :: 3.8
9
9
  Classifier: Programming Language :: Python :: 3.9
10
10
  Classifier: Programming Language :: Python :: 3.10
11
11
  Classifier: Programming Language :: Python :: 3.11
12
- Requires-Dist: lnschema_core==0.64.0
13
- Requires-Dist: lamindb_setup==0.67.0
14
- Requires-Dist: lamin_utils==0.13.0
15
- Requires-Dist: lamin_cli==0.10.0
12
+ Requires-Dist: lnschema_core==0.64.1
13
+ Requires-Dist: lamindb_setup==0.68.0
14
+ Requires-Dist: lamin_utils==0.13.1
15
+ Requires-Dist: lamin_cli==0.10.2
16
16
  Requires-Dist: rapidfuzz
17
17
  Requires-Dist: pyarrow
18
18
  Requires-Dist: typing_extensions!=4.6.0
@@ -64,7 +64,7 @@ Provides-Extra: zarr
64
64
  - Track data lineage across notebooks & pipelines.
65
65
  - Integrate registries for experimental metadata & in-house ontologies.
66
66
  - Validate, standardize & annotate.
67
- - Collaborate across a mesh of distributed LaminDB instances.
67
+ - Collaborate across distributed LaminDB instances.
68
68
 
69
69
  ## Documentation
70
70
 
@@ -8,7 +8,7 @@
8
8
  - Track data lineage across notebooks & pipelines.
9
9
  - Integrate registries for experimental metadata & in-house ontologies.
10
10
  - Validate, standardize & annotate.
11
- - Collaborate across a mesh of distributed LaminDB instances.
11
+ - Collaborate across distributed LaminDB instances.
12
12
 
13
13
  ## Documentation
14
14
 
@@ -1,6 +1,7 @@
1
1
  # Changelog
2
2
 
3
3
 
4
+
4
5
  ```{eval-rst}
5
6
  .. role:: small
6
7
  ```
@@ -8,6 +9,16 @@
8
9
 
9
10
  ## 0.69
10
11
 
12
+ ### 0.69.2 {small}`2024-03-26`
13
+
14
+ - ✨ Stage collections [PR](https://github.com/laminlabs/lamindb/pull/1521) [@Koncopd](https://github.com/Koncopd)
15
+ - ✨ Improve functionality for folder-like artifacts [PR](https://github.com/laminlabs/lamindb/pull/1517) [@Koncopd](https://github.com/Koncopd)
16
+ - 📝 Improve the introduction page [PR](https://github.com/laminlabs/lamindb/pull/1510) [PR](https://github.com/laminlabs/lamindb/pull/1514) [@sunnyosun](https://github.com/sunnyosun) [@Zethson](https://github.com/Zethson)
17
+
18
+ ### 0.69.1 {small}`2024-03-18`
19
+
20
+ ✨ To try out, add `lamindb.validation` with the `Validator` class [PR](https://github.com/laminlabs/lamindb/pull/1508) [@sunnyosun](https://github.com/sunnyosun)
21
+
11
22
  ### 0.69.0 {small}`2024-03-17`
12
23
 
13
24
  Main new features:
@@ -9,7 +9,6 @@ faq/track-run-inputs
9
9
  faq/setup
10
10
  faq/import-schema
11
11
  faq/reference-field
12
- faq/validator
13
12
  faq/key
14
13
  faq/visibility
15
14
  faq/delete