labnotes 0.0.67__tar.gz → 0.0.68__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (111) hide show
  1. {labnotes-0.0.67 → labnotes-0.0.68}/PKG-INFO +1 -1
  2. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/create_app.py +8 -0
  3. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/experiment_notes.py +2 -2
  4. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/static/note-edit.js +1 -4
  5. labnotes-0.0.68/src/labnotes/tables/note_text.py +10 -0
  6. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/tables/open_tables.py +1 -1
  7. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/tables/read_file.py +2 -0
  8. labnotes-0.0.68/src/labnotes/wait_for_note.py +20 -0
  9. {labnotes-0.0.67 → labnotes-0.0.68}/.gitignore +0 -0
  10. {labnotes-0.0.67 → labnotes-0.0.68}/CHANGELOG.md +0 -0
  11. {labnotes-0.0.67 → labnotes-0.0.68}/MIGRATIONS.md +0 -0
  12. {labnotes-0.0.67 → labnotes-0.0.68}/README.md +0 -0
  13. {labnotes-0.0.67 → labnotes-0.0.68}/pyproject.toml +0 -0
  14. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/__init__.py +0 -0
  15. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/asset_url.py +0 -0
  16. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/check_counts.py +0 -0
  17. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/cli.py +0 -0
  18. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/context.md +0 -0
  19. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/context_guide.py +0 -0
  20. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/count_runs.py +0 -0
  21. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/create_experiment.py +0 -0
  22. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/create_note.py +0 -0
  23. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/data_html.py +0 -0
  24. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/default_config_text.py +0 -0
  25. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/default_counts.py +0 -0
  26. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/drain_watch.py +0 -0
  27. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/experiment_runs.py +0 -0
  28. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/experiments.py +0 -0
  29. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/file_changes.py +0 -0
  30. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/format_duration.py +0 -0
  31. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/format_value.py +0 -0
  32. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/group_runs.py +0 -0
  33. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/init.py +0 -0
  34. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/invocation_started.py +0 -0
  35. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/is_positive_int.py +0 -0
  36. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/list_experiments.py +0 -0
  37. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/list_runs.py +0 -0
  38. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/load_config.py +0 -0
  39. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/load_experiment.py +0 -0
  40. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/models.py +0 -0
  41. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/modes.py +0 -0
  42. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/nests_runs.py +0 -0
  43. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/note_path.py +0 -0
  44. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/notebook_kernel.py +0 -0
  45. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/output_html.py +0 -0
  46. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/parse_run_view.py +0 -0
  47. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/print_rows.py +0 -0
  48. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/python_blocks.py +0 -0
  49. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/read_config.py +0 -0
  50. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/read_path.py +0 -0
  51. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/render_markdown.py +0 -0
  52. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/runner/__init__.py +0 -0
  53. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/runner/describe_event.py +0 -0
  54. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/runner/execute_run.py +0 -0
  55. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/runner/hold_folder.py +0 -0
  56. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/runner/new_param_run_id.py +0 -0
  57. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/runner/new_run_id.py +0 -0
  58. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/runner/new_stamped_run_id.py +0 -0
  59. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/runner/param_args.py +0 -0
  60. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/runner/param_grid.py +0 -0
  61. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/runner/param_run_name.py +0 -0
  62. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/runner/plan_runs.py +0 -0
  63. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/runner/read_experiment_config.py +0 -0
  64. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/runner/run_experiment.py +0 -0
  65. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/runner/run_folder.py +0 -0
  66. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/runner/run_headless.py +0 -0
  67. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/runner/runs_parent.py +0 -0
  68. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/runner/shell_command.py +0 -0
  69. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/runner/start_experiment.py +0 -0
  70. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/runner/stop_then_kill.py +0 -0
  71. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/runner/wait_for_group.py +0 -0
  72. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/runner/write_run_json.py +0 -0
  73. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/save_conflict_copy.py +0 -0
  74. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/save_note.py +0 -0
  75. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/saved_outputs.py +0 -0
  76. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/serve_app.py +0 -0
  77. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/server.py +0 -0
  78. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/sort_href.py +0 -0
  79. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/sql_quote.py +0 -0
  80. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/static/experiment.js +0 -0
  81. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/static/labnotes.css +0 -0
  82. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/static/new-note.js +0 -0
  83. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/static/note-editor.js +0 -0
  84. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/static/row-link.js +0 -0
  85. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/static/run-cell.js +0 -0
  86. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/static/view-toggle.js +0 -0
  87. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/summarize_config.py +0 -0
  88. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/tables/__init__.py +0 -0
  89. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/tables/experiment_rows.py +0 -0
  90. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/tables/file_prefix.py +0 -0
  91. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/tables/iso_time.py +0 -0
  92. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/tables/list_experiment_runs.py +0 -0
  93. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/tables/path_glob.py +0 -0
  94. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/tables/path_pattern.py +0 -0
  95. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/tables/read_experiment.py +0 -0
  96. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/tables/read_run.py +0 -0
  97. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/tables/summarize_experiments.py +0 -0
  98. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/templates/base.html +0 -0
  99. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/templates/editor_imports.html +0 -0
  100. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/templates/experiment.html +0 -0
  101. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/templates/index.html +0 -0
  102. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/templates/note.html +0 -0
  103. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/tui/__init__.py +0 -0
  104. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/tui/dim.py +0 -0
  105. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/tui/format_elapsed.py +0 -0
  106. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/tui/run_app.py +0 -0
  107. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/tui/run_tui.py +0 -0
  108. {labnotes-0.0.67 → labnotes-0.0.68}/src/labnotes/tui/runs_table.py +0 -0
  109. {labnotes-0.0.67 → labnotes-0.0.68}/testing-conventions.toml +0 -0
  110. {labnotes-0.0.67 → labnotes-0.0.68}/tests/integration/conftest.py +0 -0
  111. {labnotes-0.0.67 → labnotes-0.0.68}/uv.lock +0 -0
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.5
2
2
  Name: labnotes
3
- Version: 0.0.67
3
+ Version: 0.0.68
4
4
  Summary: Browse experiment designs, notes, and run data from a folder.
5
5
  Project-URL: Repository, https://github.com/thekevinscott/labnotes
6
6
  Author-email: Kevin Scott <me@thekevinscott.com>
@@ -36,6 +36,7 @@ from labnotes.save_conflict_copy import save_conflict_copy
36
36
  from labnotes.save_note import save_note
37
37
  from labnotes.saved_outputs import saved_outputs
38
38
  from labnotes.tables.open_tables import open_tables
39
+ from labnotes.wait_for_note import wait_for_note
39
40
 
40
41
  HERE = Path(__file__).parent
41
42
  templates = Jinja2Templates(directory=HERE / "templates")
@@ -149,6 +150,13 @@ def create_app(config: LabnotesConfig) -> Starlette:
149
150
  current = save_note(path, base, content)
150
151
  if current is not None:
151
152
  return JSONResponse({"content": current}, status_code=409)
153
+ await wait_for_note(
154
+ request.app.state.tables,
155
+ config.root,
156
+ request.path_params["name"],
157
+ request.path_params["note"],
158
+ content,
159
+ )
152
160
  return Response(status_code=204)
153
161
 
154
162
  async def post_conflict(request: Request) -> Response:
@@ -12,13 +12,13 @@ async def experiment_notes(
12
12
  if note is not None:
13
13
  where += f" AND filename = {quote_string(note)}"
14
14
  rows = await tables.query(
15
- f"SELECT filename, path FROM files WHERE {where} ORDER BY filename"
15
+ f"SELECT filename, path, content FROM files WHERE {where} ORDER BY filename"
16
16
  )
17
17
  return [
18
18
  {
19
19
  "name": str(row["filename"]),
20
20
  "path": str(root / str(row["path"])),
21
- "content": (root / str(row["path"])).read_text(encoding="utf-8"),
21
+ "content": str(row["content"] or ""),
22
22
  }
23
23
  for row in rows
24
24
  ]
@@ -11,10 +11,7 @@ export function attach(note, openNow) {
11
11
 
12
12
  editor.then(
13
13
  () => prose.classList.add("editable"),
14
- () => {
15
- status.textContent = "Editing needs the network: the editor loads from esm.sh.";
16
- status.hidden = false;
17
- },
14
+ () => {},
18
15
  );
19
16
 
20
17
  const open = async (event) => {
@@ -0,0 +1,10 @@
1
+ from pathlib import Path
2
+
3
+
4
+ def note_text(path: Path) -> str | None:
5
+ if path.suffix != ".md":
6
+ return None
7
+ try:
8
+ return path.read_text(encoding="utf-8")
9
+ except UnicodeDecodeError:
10
+ return None
@@ -29,7 +29,7 @@ CREATE VIEW experiments AS
29
29
  FILES = """
30
30
  CREATE TABLE files (
31
31
  experiment TEXT, filename TEXT, path TEXT PRIMARY KEY, ctime TEXT, mtime TEXT,
32
- mtime_ns INTEGER
32
+ mtime_ns INTEGER, content TEXT
33
33
  )
34
34
  """
35
35
  RUNS = """
@@ -2,6 +2,7 @@ from pathlib import Path
2
2
 
3
3
  from labnotes.tables.file_prefix import file_prefix
4
4
  from labnotes.tables.iso_time import iso_time
5
+ from labnotes.tables.note_text import note_text
5
6
  from labnotes.tables.path_pattern import path_pattern
6
7
 
7
8
 
@@ -20,5 +21,6 @@ def read_file(root: Path, template: str, path: str) -> list[dict[str, object]]:
20
21
  "ctime": iso_time(stat.st_ctime),
21
22
  "mtime": iso_time(stat.st_mtime),
22
23
  "mtime_ns": stat.st_mtime_ns,
24
+ "content": note_text(Path(path)),
23
25
  }
24
26
  ]
@@ -0,0 +1,20 @@
1
+ import asyncio
2
+ from pathlib import Path
3
+
4
+ from dirsql import DirSQL
5
+
6
+ from labnotes.experiment_notes import experiment_notes
7
+
8
+
9
+ async def wait_for_note(
10
+ tables: DirSQL,
11
+ root: Path,
12
+ experiment: str,
13
+ note: str,
14
+ content: str | None = None,
15
+ ) -> None:
16
+ for _ in range(40):
17
+ found = await experiment_notes(tables, root, experiment, note)
18
+ if found and (content is None or found[0]["content"] == content):
19
+ return
20
+ await asyncio.sleep(0.05)
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes