jupyter-analysis-tools 1.2.2__tar.gz → 1.3.1__tar.gz

jupyter_analysis_tools-1.3.1/.copier-answers.yml

@@ -0,0 +1,25 @@
+# Changes here will be overwritten by Copier
+_commit: cc8ce84
+_src_path: ~/code/yapy-copier-template
+author_count: 2
+author_emails: ingo.bressler@bam.de, brian.pauw@bam.de
+author_names: Ingo Breßler, Brian R. Pauw
+author_websites: https://github.com/ibresslerBAM, https://lookingatnothing.com
+copyright_from: 2018
+docs_url: https://BAMresearch.github.io/jupyter-analysis-tools
+license: MIT
+project_description: Yet another Python library with helpers and utilities for data
+    analysis and processing.
+project_name: Jupyter Analysis Tools
+pypi_host: pypi.org
+python_versions:
+- '3.11'
+- '3.12'
+- '3.13'
+release_date_question: today
+repo_hosting_domain: github.com
+repo_main_branch: main
+repo_name: jupyter-analysis-tools
+repo_userorg: BAMresearch
+sphinx_theme: furo
+version: 1.3.1

jupyter_analysis_tools-1.3.1/AUTHORS.rst

@@ -0,0 +1,6 @@
+
+Authors
+=======
+
+* Ingo Breßler - ingo.bressler@bam.de
+* Brian R. Pauw - brian.pauw@bam.de

{jupyter_analysis_tools-1.2.2 → jupyter_analysis_tools-1.3.1}/CHANGELOG.md

@@ -1,5 +1,59 @@
 # CHANGELOG
 
+## v1.3.1 (2025-07-23)
+
+### Bug fixes
+
+* Project: update manifest and flake8 config, reapplied template ([`c98c648`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/c98c6489423a45d8a195fda32396ea9d9d18b9eb))
+
+### Code style
+
+* utils: satisfy flake8 ([`2e3dc36`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/2e3dc36ef21e60f4fe7b8caea567411cc69967c0))
+
+### Continuous integration
+
+* semantic-release: replace .cookiecutterrc by .copier-answers.yml ([`2030c88`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/2030c88dfb0ca69ac332380e33b3baed9cb6cf44))
+
+* coverage: coverage-report fix ([`1bd26b7`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/1bd26b71abcb090ef32cb2fbdd05b978bce5144c))
+
+* GitHub Workflows: remove templates, rendered by *copier update* ([`8a637a5`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/8a637a5b34df4a3ec6a4e8cae97a9d3e24ad2e5c))
+
+* GitHub Workflow: publish depends on all other job to be successful ([`efc1f22`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/efc1f223aa2da882d43b27406a2f20113c2c8879))
+
+* Template: latest GitHub Workflow templates applied ([`7d87906`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/7d87906c852cb2b57704c45db0b19c7a1ae513a2))
+
+* coverage: fix path name matching rules ([`37bd2d9`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/37bd2d93a8fe10a3355feee6779f45bd9161a88b))
+
+### Documentation
+
+* Copyright years: update ([`cee35e6`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/cee35e6fe92ae27575bd7fb4a7a2638cd1c931b2))
+
+* Contributions: Authors update ([`dd5a5c4`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/dd5a5c4d81732821057bcc200f462159cffa760b))
+
+### Refactoring
+
+* Project: GitHub Workflow templates fixed ([`b346b28`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/b346b282332f0f7f81b724509a4004e6a69d7791))
+
+* Project: GitHub Workflow templates updated ([`235c4d9`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/235c4d9c53997fdf4c08913361fb57167939cd7c))
+
+* Project: switching to copier for project template with update mechanism ([`0d3064b`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/0d3064b8cef45667b0964aab248b583424946207))
+
+## v1.3.0 (2025-07-16)
+
+### Bug fixes
+
+* utils.extract7z: informative info message ([`80d2f71`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/80d2f7134992d59f0bfd7f5e7bc27772f77cd452))
+
+### Continuous integration
+
+* coverage: fix coverage artifact name for multiple matrix.os ([`f471599`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/f471599b8c86e29fd20b78f7cbd9291c3a6dd98a))
+
+* testing: test on Windows as well ([`4a83c39`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/4a83c3924bcb820ef0728af40b86a0f6622dfef2))
+
+### Features
+
+* utils.makeNetworkdriveAbsolute: new routines for translating a windows drive letter mount to its network location ([`823a6bf`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/823a6bfe126829381bc14d34578f342f4b9d3e8f))
+
 ## v1.2.2 (2025-07-15)
 
 ### Bug fixes

{jupyter_analysis_tools-1.2.2 → jupyter_analysis_tools-1.3.1}/LICENSE

@@ -1,6 +1,6 @@
 MIT License
 
-Copyright (c) 2018-2023, Ingo Breßler
+Copyright (c) 2018-2025, Ingo Breßler and Brian R. Pauw
 
 Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions:
 

{jupyter_analysis_tools-1.2.2 → jupyter_analysis_tools-1.3.1}/MANIFEST.in

@@ -3,10 +3,11 @@ exclude docs/reference/autosummary/*
 graft src
 graft ci
 graft tests
+graft testdata
 
 include .editorconfig
 include .pre-commit-config.yaml
-include .cookiecutterrc
+include .copier-answers.yml
 include tox.ini
 
 include AUTHORS.rst
@@ -17,4 +18,3 @@ include README.rst
 
 global-exclude *.py[cod] __pycache__/* *.so *.dylib .DS_Store */.ipynb_checkpoints/*
 recursive-include templates *.j2
-recursive-include testdata *.pdh *.ssfz *.json

{jupyter_analysis_tools-1.2.2 → jupyter_analysis_tools-1.3.1}/PKG-INFO

@@ -1,15 +1,14 @@
 Metadata-Version: 2.4
 Name: jupyter-analysis-tools
-Version: 1.2.2
+Version: 1.3.1
 Summary: Yet another Python library with helpers and utilities for data analysis and processing.
-Author-email: Ingo Breßler <dev@ingobressler.net>
-License: MIT license
+Author-email: Ingo Breßler <ingo.bressler@bam.de>, "Brian R. Pauw" <brian.pauw@bam.de>
+License-Expression: MIT
 Project-URL: homepage, https://BAMresearch.github.io/jupyter-analysis-tools
 Project-URL: documentation, https://BAMresearch.github.io/jupyter-analysis-tools
 Project-URL: repository, https://github.com/BAMresearch/jupyter-analysis-tools
 Project-URL: changelog, https://BAMresearch.github.io/jupyter-analysis-tools/changelog.html
 Classifier: Development Status :: 4 - Beta
-Classifier: License :: OSI Approved :: MIT License
 Classifier: Operating System :: Unix
 Classifier: Operating System :: POSIX
 Classifier: Operating System :: MacOS
@@ -53,8 +52,8 @@ Yet another Python library with helpers and utilities for data analysis and proc
     :target: https://pypi.org/project/jupyter-analysis-tools
     :alt: PyPI Package latest release
 
-.. |commits-since| image:: https://img.shields.io/github/commits-since/BAMresearch/jupyter-analysis-tools/v1.2.2.svg
-    :target: https://github.com/BAMresearch/jupyter-analysis-tools/compare/v1.2.2...main
+.. |commits-since| image:: https://img.shields.io/github/commits-since/BAMresearch/jupyter-analysis-tools/v1.3.1.svg
+    :target: https://github.com/BAMresearch/jupyter-analysis-tools/compare/v1.3.1...main
     :alt: Commits since latest release
 
 .. |license| image:: https://img.shields.io/pypi/l/jupyter-analysis-tools.svg
@@ -127,6 +126,60 @@ Note, to combine the coverage data from all the tox environments run:
 
 # CHANGELOG
 
+## v1.3.1 (2025-07-23)
+
+### Bug fixes
+
+* Project: update manifest and flake8 config, reapplied template ([`c98c648`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/c98c6489423a45d8a195fda32396ea9d9d18b9eb))
+
+### Code style
+
+* utils: satisfy flake8 ([`2e3dc36`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/2e3dc36ef21e60f4fe7b8caea567411cc69967c0))
+
+### Continuous integration
+
+* semantic-release: replace .cookiecutterrc by .copier-answers.yml ([`2030c88`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/2030c88dfb0ca69ac332380e33b3baed9cb6cf44))
+
+* coverage: coverage-report fix ([`1bd26b7`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/1bd26b71abcb090ef32cb2fbdd05b978bce5144c))
+
+* GitHub Workflows: remove templates, rendered by *copier update* ([`8a637a5`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/8a637a5b34df4a3ec6a4e8cae97a9d3e24ad2e5c))
+
+* GitHub Workflow: publish depends on all other job to be successful ([`efc1f22`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/efc1f223aa2da882d43b27406a2f20113c2c8879))
+
+* Template: latest GitHub Workflow templates applied ([`7d87906`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/7d87906c852cb2b57704c45db0b19c7a1ae513a2))
+
+* coverage: fix path name matching rules ([`37bd2d9`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/37bd2d93a8fe10a3355feee6779f45bd9161a88b))
+
+### Documentation
+
+* Copyright years: update ([`cee35e6`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/cee35e6fe92ae27575bd7fb4a7a2638cd1c931b2))
+
+* Contributions: Authors update ([`dd5a5c4`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/dd5a5c4d81732821057bcc200f462159cffa760b))
+
+### Refactoring
+
+* Project: GitHub Workflow templates fixed ([`b346b28`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/b346b282332f0f7f81b724509a4004e6a69d7791))
+
+* Project: GitHub Workflow templates updated ([`235c4d9`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/235c4d9c53997fdf4c08913361fb57167939cd7c))
+
+* Project: switching to copier for project template with update mechanism ([`0d3064b`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/0d3064b8cef45667b0964aab248b583424946207))
+
+## v1.3.0 (2025-07-16)
+
+### Bug fixes
+
+* utils.extract7z: informative info message ([`80d2f71`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/80d2f7134992d59f0bfd7f5e7bc27772f77cd452))
+
+### Continuous integration
+
+* coverage: fix coverage artifact name for multiple matrix.os ([`f471599`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/f471599b8c86e29fd20b78f7cbd9291c3a6dd98a))
+
+* testing: test on Windows as well ([`4a83c39`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/4a83c3924bcb820ef0728af40b86a0f6622dfef2))
+
+### Features
+
+* utils.makeNetworkdriveAbsolute: new routines for translating a windows drive letter mount to its network location ([`823a6bf`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/823a6bfe126829381bc14d34578f342f4b9d3e8f))
+
 ## v1.2.2 (2025-07-15)
 
 ### Bug fixes

{jupyter_analysis_tools-1.2.2 → jupyter_analysis_tools-1.3.1}/README.rst

@@ -14,8 +14,8 @@ Yet another Python library with helpers and utilities for data analysis and proc
     :target: https://pypi.org/project/jupyter-analysis-tools
     :alt: PyPI Package latest release
 
-.. |commits-since| image:: https://img.shields.io/github/commits-since/BAMresearch/jupyter-analysis-tools/v1.2.2.svg
-    :target: https://github.com/BAMresearch/jupyter-analysis-tools/compare/v1.2.2...main
+.. |commits-since| image:: https://img.shields.io/github/commits-since/BAMresearch/jupyter-analysis-tools/v1.3.1.svg
+    :target: https://github.com/BAMresearch/jupyter-analysis-tools/compare/v1.3.1...main
     :alt: Commits since latest release
 
 .. |license| image:: https://img.shields.io/pypi/l/jupyter-analysis-tools.svg

{jupyter_analysis_tools-1.2.2 → jupyter_analysis_tools-1.3.1}/ci/requirements.txt

@@ -5,6 +5,7 @@ six>=1.14.0
 tox
 build
 twine
+toml
 python-semantic-release
 # provides the *coverage* command to combine and publish coverage data
 # generated within tox environments

{jupyter_analysis_tools-1.2.2 → jupyter_analysis_tools-1.3.1}/docs/conf.py

@@ -19,17 +19,20 @@ extensions = [
     "sphinx.ext.napoleon",
     "sphinx.ext.todo",
     "sphinx.ext.viewcode",
+    "sphinx.ext.inheritance_diagram",
+    "sphinx.ext.graphviz",
     "myst_parser",
 ]
+inheritance_edge_attrs = dict(color="gray")  # readable in darkmode too
 autosummary_generate = True  # Turn on sphinx.ext.autosummary
 templates_path = ["_templates"]
 source_suffix = ".rst"
 master_doc = "index"
 project = "Jupyter Analysis Tools"
-year = "2018-2023"
-author = "Ingo Breßler"
+year = "2018-2025"
+author = "Ingo Breßler and Brian R. Pauw"
 copyright = "{0}, {1}".format(year, author)
-version = "1.2.2"
+version = "1.3.1"
 release = version
 commit_id = None
 try:
@@ -42,6 +45,7 @@ except subprocess.CalledProcessError as e:
 
 autodoc_mock_imports = [
     "ipykernel",
+    "notebook",
     "pandas",
     "ipywidgets",
     "matplotlib",
@@ -49,6 +53,9 @@ autodoc_mock_imports = [
     "h5py",
     "pint",
     "sasmodels",
+    "chempy",
+    "graphviz",
+    "mcsas3",
 ]
 
 pygments_style = "trac"
@@ -78,7 +85,7 @@ linkcheck_ignore = [
     + r".*",
     # attempted fix of '406 Client Error: Not Acceptable for url'
     # https://github.com/sphinx-doc/sphinx/issues/1331
-    join(project_meta["project"]["urls"]["repository"], "commit", r"[0-9a-fA-F]+"),
+    join(project_meta["project"]["urls"]["repository"], "commit", r"[0-9a-fA-F]+")
 ]
 linkcheck_anchors_ignore_for_url = [
     r"https://pypi\.org/project/[^/]+",

{jupyter_analysis_tools-1.2.2 → jupyter_analysis_tools-1.3.1}/pyproject.toml

@@ -1,13 +1,11 @@
 [project]
 name = "jupyter-analysis-tools"
 description = "Yet another Python library with helpers and utilities for data analysis and processing."
-authors = [{ name = "Ingo Breßler", email = "dev@ingobressler.net" }]
 dynamic = ["version", "readme"]
-license = {text = "MIT license"}
+license = "MIT"
 classifiers = [
   # complete classifier list: http://pypi.python.org/pypi?%3Aaction=list_classifiers
   "Development Status :: 4 - Beta",
-  "License :: OSI Approved :: MIT License",
   "Operating System :: Unix",
   "Operating System :: POSIX",
   "Operating System :: MacOS",
@@ -30,6 +28,14 @@ dependencies = [
   "numpy", "scipy", "pandas", "matplotlib", "ipywidgets"
 ]
 
+[[project.authors]]
+name = "Ingo Breßler"
+email = "ingo.bressler@bam.de"
+
+[[project.authors]]
+name = "Brian R. Pauw"
+email = "brian.pauw@bam.de"
+
 [project.urls]
 homepage = "https://BAMresearch.github.io/jupyter-analysis-tools"
 documentation = "https://BAMresearch.github.io/jupyter-analysis-tools"
@@ -53,7 +59,7 @@ version = {attr = "jupyter_analysis_tools.__version__"}
 readme = {file = ["README.rst", "CHANGELOG.md"]}
 
 [tool.coverage.report]
-path = "coverage-report"
+path = "coverage-report"  # see coverage.yml github action
 
 # on version numbers: https://peps.python.org/pep-0440/
 # and bottom of https://softwareengineering.stackexchange.com/a/151558

{jupyter_analysis_tools-1.2.2 → jupyter_analysis_tools-1.3.1}/src/jupyter_analysis_tools/__init__.py

@@ -1,7 +1,7 @@
 # -*- coding: utf-8 -*-
 # __init__.py
 
-__version__ = "1.2.2"
+__version__ = "1.3.1"
 
 from .binning import reBin
 from .git import checkRepo, isNBstripoutActivated, isNBstripoutInstalled, isRepo

{jupyter_analysis_tools-1.2.2 → jupyter_analysis_tools-1.3.1}/src/jupyter_analysis_tools/utils.py

@@ -105,6 +105,30 @@ def addEnvScriptsToPATH():
         os.environ["PATH"] = sep.join(environPATH)
 
 
+def networkdriveMapping(cmdOutput: str = None):
+    """Returns a dict of mapping drive letters to network paths (on Windows)."""
+    if isWindows():
+        if cmdOutput is None:
+            proc = subprocess.run(["net", "use"], capture_output=True, text=True, encoding="cp850")
+            cmdOutput = proc.stdout
+        rows = [line.split() for line in cmdOutput.splitlines() if "Windows Network" in line]
+        rows = dict(
+            [row[1:3] for row in rows if row[1].endswith(":") and row[2].startswith("\\\\")]
+        )
+        return rows
+    return {}
+
+
+def makeNetworkdriveAbsolute(filepath, cmdOutput: str = None):
+    """Replaces the drive letter of the given path by the respective network path, if possible."""
+    if isWindows() and not filepath.drive.startswith(r"\\"):
+        drivemap = networkdriveMapping(cmdOutput=cmdOutput)
+        prefix = drivemap.get(filepath.drive, None)
+        if prefix is not None:
+            filepath = Path(prefix).joinpath(*filepath.parts[1:])
+    return filepath
+
+
 def checkWinFor7z():
     """Extend the PATH environment variable for access to the 7-zip executable."""
     if not isWindows():
@@ -127,7 +151,7 @@ def extract7z(fn, workdir=None):
     assert os.path.isfile(os.path.join(workdir, fn)), "Provided 7z archive '{}' not found!".format(
         fn
     )
-    print("Extracting archived McDLS results:")
+    print(f"Extracting '{fn}':")
     proc = subprocess.run(
         ["7z", "x", fn],
         cwd=workdir,

{jupyter_analysis_tools-1.2.2 → jupyter_analysis_tools-1.3.1}/src/jupyter_analysis_tools.egg-info/PKG-INFO

@@ -1,15 +1,14 @@
 Metadata-Version: 2.4
 Name: jupyter-analysis-tools
-Version: 1.2.2
+Version: 1.3.1
 Summary: Yet another Python library with helpers and utilities for data analysis and processing.
-Author-email: Ingo Breßler <dev@ingobressler.net>
-License: MIT license
+Author-email: Ingo Breßler <ingo.bressler@bam.de>, "Brian R. Pauw" <brian.pauw@bam.de>
+License-Expression: MIT
 Project-URL: homepage, https://BAMresearch.github.io/jupyter-analysis-tools
 Project-URL: documentation, https://BAMresearch.github.io/jupyter-analysis-tools
 Project-URL: repository, https://github.com/BAMresearch/jupyter-analysis-tools
 Project-URL: changelog, https://BAMresearch.github.io/jupyter-analysis-tools/changelog.html
 Classifier: Development Status :: 4 - Beta
-Classifier: License :: OSI Approved :: MIT License
 Classifier: Operating System :: Unix
 Classifier: Operating System :: POSIX
 Classifier: Operating System :: MacOS
@@ -53,8 +52,8 @@ Yet another Python library with helpers and utilities for data analysis and proc
     :target: https://pypi.org/project/jupyter-analysis-tools
     :alt: PyPI Package latest release
 
-.. |commits-since| image:: https://img.shields.io/github/commits-since/BAMresearch/jupyter-analysis-tools/v1.2.2.svg
-    :target: https://github.com/BAMresearch/jupyter-analysis-tools/compare/v1.2.2...main
+.. |commits-since| image:: https://img.shields.io/github/commits-since/BAMresearch/jupyter-analysis-tools/v1.3.1.svg
+    :target: https://github.com/BAMresearch/jupyter-analysis-tools/compare/v1.3.1...main
     :alt: Commits since latest release
 
 .. |license| image:: https://img.shields.io/pypi/l/jupyter-analysis-tools.svg
@@ -127,6 +126,60 @@ Note, to combine the coverage data from all the tox environments run:
 
 # CHANGELOG
 
+## v1.3.1 (2025-07-23)
+
+### Bug fixes
+
+* Project: update manifest and flake8 config, reapplied template ([`c98c648`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/c98c6489423a45d8a195fda32396ea9d9d18b9eb))
+
+### Code style
+
+* utils: satisfy flake8 ([`2e3dc36`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/2e3dc36ef21e60f4fe7b8caea567411cc69967c0))
+
+### Continuous integration
+
+* semantic-release: replace .cookiecutterrc by .copier-answers.yml ([`2030c88`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/2030c88dfb0ca69ac332380e33b3baed9cb6cf44))
+
+* coverage: coverage-report fix ([`1bd26b7`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/1bd26b71abcb090ef32cb2fbdd05b978bce5144c))
+
+* GitHub Workflows: remove templates, rendered by *copier update* ([`8a637a5`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/8a637a5b34df4a3ec6a4e8cae97a9d3e24ad2e5c))
+
+* GitHub Workflow: publish depends on all other job to be successful ([`efc1f22`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/efc1f223aa2da882d43b27406a2f20113c2c8879))
+
+* Template: latest GitHub Workflow templates applied ([`7d87906`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/7d87906c852cb2b57704c45db0b19c7a1ae513a2))
+
+* coverage: fix path name matching rules ([`37bd2d9`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/37bd2d93a8fe10a3355feee6779f45bd9161a88b))
+
+### Documentation
+
+* Copyright years: update ([`cee35e6`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/cee35e6fe92ae27575bd7fb4a7a2638cd1c931b2))
+
+* Contributions: Authors update ([`dd5a5c4`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/dd5a5c4d81732821057bcc200f462159cffa760b))
+
+### Refactoring
+
+* Project: GitHub Workflow templates fixed ([`b346b28`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/b346b282332f0f7f81b724509a4004e6a69d7791))
+
+* Project: GitHub Workflow templates updated ([`235c4d9`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/235c4d9c53997fdf4c08913361fb57167939cd7c))
+
+* Project: switching to copier for project template with update mechanism ([`0d3064b`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/0d3064b8cef45667b0964aab248b583424946207))
+
+## v1.3.0 (2025-07-16)
+
+### Bug fixes
+
+* utils.extract7z: informative info message ([`80d2f71`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/80d2f7134992d59f0bfd7f5e7bc27772f77cd452))
+
+### Continuous integration
+
+* coverage: fix coverage artifact name for multiple matrix.os ([`f471599`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/f471599b8c86e29fd20b78f7cbd9291c3a6dd98a))
+
+* testing: test on Windows as well ([`4a83c39`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/4a83c3924bcb820ef0728af40b86a0f6622dfef2))
+
+### Features
+
+* utils.makeNetworkdriveAbsolute: new routines for translating a windows drive letter mount to its network location ([`823a6bf`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/823a6bfe126829381bc14d34578f342f4b9d3e8f))
+
 ## v1.2.2 (2025-07-15)
 
 ### Bug fixes

{jupyter_analysis_tools-1.2.2 → jupyter_analysis_tools-1.3.1}/src/jupyter_analysis_tools.egg-info/SOURCES.txt

@@ -1,4 +1,4 @@
-.cookiecutterrc
+.copier-answers.yml
 .editorconfig
 .pre-commit-config.yaml
 AUTHORS.rst
@@ -10,13 +10,6 @@ README.rst
 pyproject.toml
 tox.ini
 ci/requirements.txt
-ci/update.py
-ci/templates/.github/workflows/build.yml
-ci/templates/.github/workflows/ci-cd.yml
-ci/templates/.github/workflows/coverage.yml
-ci/templates/.github/workflows/docs.yml
-ci/templates/.github/workflows/release.yml
-ci/templates/.github/workflows/tests.yml
 docs/authors.rst
 docs/changelog.rst
 docs/conf.py

{jupyter_analysis_tools-1.2.2 → jupyter_analysis_tools-1.3.1}/tests/requirements.txt

@@ -1,4 +1,5 @@
 ipykernel
+notebook
 pandas
 ipywidgets
 matplotlib

jupyter_analysis_tools-1.3.1/tests/utils.py

@@ -0,0 +1,80 @@
+# -*- coding: utf-8 -*-
+# tests/utils.py
+
+
+import os
+from pathlib import Path
+
+from jupyter_analysis_tools.utils import (
+    appendToPATH,
+    isWindows,
+    makeNetworkdriveAbsolute,
+    networkdriveMapping,
+)
+
+# output of 'net use' command on Windows
+outNetUse = r"""Neue Verbindungen werden gespeichert.
+
+
+Status       Lokal     Remote                    Netzwerk
+
+-------------------------------------------------------------------------------
+OK           G:        \\ALPHA\BETA              Microsoft Windows Network
+OK           K:        \\GAM\MMA                 Microsoft Windows Network
+OK           M:        \\user\drive\uname        Microsoft Windows Network
+OK           T:        \\test\foldername         Microsoft Windows Network
+OK                     \\psi\folder              Microsoft Windows Network
+Der Befehl wurde erfolgreich ausgeführt.
+"""
+
+
+def test_appendToPATH(capsys):
+    # Setting up a PATH for testing first (platform dependent).
+    testpath = "/usr/local/sbin:/usr/local/bin:/sbin:/usr/games:/usr/local/games:/snap/bin"
+    if isWindows():
+        testpath = "something else"
+    os.environ["PATH"] = testpath
+    assert os.environ["PATH"] == testpath
+
+    if not isWindows():  # Linux edition
+        appendToPATH("/tmp", ("one", "two"), verbose=True)
+        captured = capsys.readouterr()
+        assert (
+            captured.out
+            == """\
+     /tmp/one [exists: False]
+     /tmp/two [exists: False]
+"""
+        )
+        assert os.environ["PATH"] == testpath + ":/tmp/one:/tmp/two"
+
+    else:  # Windows edition
+        appendToPATH(r"C:\Windows", ("one", "two"), verbose=True)
+        captured = capsys.readouterr()
+        assert (
+            captured.out
+            == """\
+     C:\\Windows\\one [exists: False]
+     C:\\Windows\\two [exists: False]
+"""
+        )
+        assert os.environ["PATH"] == testpath + r";C:\Windows\one;C:\Windows\two"
+
+
+def test_networkdriveMapping():
+    if isWindows():
+        map = networkdriveMapping(cmdOutput=outNetUse)
+        assert map == {
+            "G:": "\\\\ALPHA\\BETA",
+            "K:": "\\\\GAM\\MMA",
+            "M:": "\\\\user\\drive\\uname",
+            "T:": "\\\\test\\foldername",
+        }
+
+
+def test_makeNetworkdriveAbsolute():
+    if isWindows():
+        filepath = Path(r"M:\some\folders\a file name.ext")
+        newpath = makeNetworkdriveAbsolute(filepath, cmdOutput=outNetUse)
+        assert filepath != newpath
+        assert newpath == Path(r"\\user\drive\uname\some\folders\a file name.ext")

{jupyter_analysis_tools-1.2.2 → jupyter_analysis_tools-1.3.1}/tox.ini

@@ -1,14 +1,3 @@
-# on updates run 'python3 ci/update.py --no-env' to generate tests.yml github workflows
-[testenv:bootstrap]
-deps =
-    jinja2
-    tox
-    toml
-    pyyaml
-skip_install = true
-commands =
-    python ci/update.py --no-env
-
 [tox]
 envlist =
     clean,
@@ -30,6 +19,9 @@ basepython =
 setenv =
     PYTHONPATH={toxinidir}/tests
     PYTHONUNBUFFERED=yes
+    # fix wrong cp1252 on Windows when loading a notebook with dash (or other unicode symbols)
+    # since locale.getpreferredencoding can't be changed easily
+    PYTHONUTF8=1
 deps =
     pytest
     pytest-cov
@@ -82,7 +74,7 @@ commands =
 deps =
     coverage
 skip_install = true
-allowlist_externals=/bin/rm,/usr/bin/rm,rm
+allowlist_externals=/bin/rm,/usr/bin/rm
 commands =
     coverage erase
     rm -Rf dist build htmlcov src/jupyter_analysis_tools.egg-info
@@ -122,7 +114,10 @@ testpaths =
     notebooks
 # Idea from: https://til.simonwillison.net/pytest/treat-warnings-as-errors
 filterwarnings =
-    ignore::DeprecationWarning:distutils|notebook|_pytest|xarray|nbclient|pytest_notebook|debugpy|pkg_resources
+    ignore::DeprecationWarning:distutils|notebook|_pytest|xarray|nbclient|pytest_notebook|debugpy
+    ignore::DeprecationWarning:pkg_resources|openpyxl|zmq
+    # ignore warnings about unknown pytest-notebook options below
+    ignore::Warning:_pytest
 nb_test_files = True
 nb_coverage = False
 nb_post_processors =
@@ -139,10 +134,10 @@ nb_diff_ignore =
 [coverage:paths]
 src =
    src
-   */jupyter_analysis_tools/jupyter_analysis_tools/src
+   */jupyter-analysis-tools/jupyter-analysis-tools/src
 tests =
    tests
-   */jupyter_analysis_tools/jupyter_analysis_tools/tests
+   */jupyter-analysis-tools/jupyter-analysis-tools/tests
 
 [coverage:run]
 branch = true

jupyter_analysis_tools-1.2.2/.cookiecutterrc

@@ -1,27 +0,0 @@
-# This file exists so you can easily regenerate your project.
-# run:
-#
-#    cookiecutter --overwrite-if-exists --config-file=.cookiecutterrc gh:BAMresearch/yapy-cookiecutter
-
-default_context:
-    full_name:                 'Ingo Breßler'
-    email:                     'dev@ingobressler.net'
-    website:                   'https://github.com/ibressler'
-    project_name:              'Jupyter Analysis Tools'
-    repo_name:                 'jupyter-analysis-tools'
-    repo_hosting:              'github.com'
-    repo_hosting_domain:       'github.com'
-    repo_userorg:              'BAMresearch'
-    docs_url:                  'https://BAMresearch.github.io/jupyter-analysis-tools'
-    repo_main_branch:          'main'
-    package_name:              'jupyter_analysis_tools'
-    distribution_name:         'jupyter-analysis-tools'
-    project_short_description: 'Yet another Python library with helpers and utilities for data analysis and processing.'
-    release_date:              'today'
-    year_from:                 '2018'
-    year_to:                   '2023'
-    version:                   '1.2.2'
-    pypi_host:                 'pypi.org'
-    license:                   'MIT license'
-    sphinx_theme:              'furo'
-    extra_context:             {'exclude_existing': "['AUTHORS.rst', 'CHANGELOG.md', 'src/jupyter_analysis_tools/__init__.py']"}