jupyter-analysis-tools 1.2.1__tar.gz → 1.3.0__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/.cookiecutterrc +1 -1
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/CHANGELOG.md +30 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/PKG-INFO +33 -3
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/README.rst +2 -2
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/docs/conf.py +1 -1
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/src/jupyter_analysis_tools/__init__.py +1 -1
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/src/jupyter_analysis_tools/readdata.py +13 -10
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/src/jupyter_analysis_tools/utils.py +25 -1
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/src/jupyter_analysis_tools.egg-info/PKG-INFO +33 -3
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/testdata/S2842 water.json +7 -17
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/tests/readdata.py +26 -15
- jupyter_analysis_tools-1.3.0/tests/utils.py +80 -0
- jupyter_analysis_tools-1.2.1/tests/utils.py +0 -34
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/.editorconfig +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/.pre-commit-config.yaml +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/AUTHORS.rst +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/CONTRIBUTING.rst +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/LICENSE +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/MANIFEST.in +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/ci/requirements.txt +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/ci/templates/.github/workflows/build.yml +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/ci/templates/.github/workflows/ci-cd.yml +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/ci/templates/.github/workflows/coverage.yml +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/ci/templates/.github/workflows/docs.yml +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/ci/templates/.github/workflows/release.yml +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/ci/templates/.github/workflows/tests.yml +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/ci/update.py +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/docs/_templates/class.rst +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/docs/_templates/module.rst +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/docs/authors.rst +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/docs/changelog.rst +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/docs/contributing.rst +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/docs/index.rst +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/docs/installation.rst +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/docs/readme.rst +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/docs/reference/index.rst +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/docs/requirements.txt +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/docs/spelling_wordlist.txt +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/docs/usage.rst +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/pyproject.toml +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/setup.cfg +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/src/jupyter_analysis_tools/analysis.py +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/src/jupyter_analysis_tools/binning.py +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/src/jupyter_analysis_tools/datalocations.py +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/src/jupyter_analysis_tools/distrib.py +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/src/jupyter_analysis_tools/git.py +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/src/jupyter_analysis_tools/plotting.py +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/src/jupyter_analysis_tools/widgets.py +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/src/jupyter_analysis_tools.egg-info/SOURCES.txt +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/src/jupyter_analysis_tools.egg-info/dependency_links.txt +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/src/jupyter_analysis_tools.egg-info/requires.txt +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/src/jupyter_analysis_tools.egg-info/top_level.txt +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/templates/CHANGELOG.md.j2 +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/testdata/2015-03-20-Silica.ssf.json +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/testdata/2015-03-20-Silica.ssfz +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/testdata/S2842 water.pdh +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/testdata/S2843[9].pdh +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/tests/requirements.txt +0 -0
- {jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/tox.ini +0 -0
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# CHANGELOG
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## v1.3.0 (2025-07-16)
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### Bug fixes
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* utils.extract7z: informative info message ([`80d2f71`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/80d2f7134992d59f0bfd7f5e7bc27772f77cd452))
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### Continuous integration
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* coverage: fix coverage artifact name for multiple matrix.os ([`f471599`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/f471599b8c86e29fd20b78f7cbd9291c3a6dd98a))
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* testing: test on Windows as well ([`4a83c39`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/4a83c3924bcb820ef0728af40b86a0f6622dfef2))
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### Features
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* utils.makeNetworkdriveAbsolute: new routines for translating a windows drive letter mount to its network location ([`823a6bf`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/823a6bfe126829381bc14d34578f342f4b9d3e8f))
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## v1.2.2 (2025-07-15)
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### Bug fixes
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* readPDHmeta: use unique dict keys, the xmk *key* can occur in multiple groups in PDH ([`ef41c81`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/ef41c81d40d801b5baf86f56cf9012ca35d2ccde))
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### Documentation
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* pyproject: revert specify readme+changelog document types ([`1baa762`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/1baa762d441fe0a1b7b663b9d0589de857277426))
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* pyproject: specify readme+changelog document types to render overview on pypi correctly ([`6e4d1e5`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/6e4d1e56640b604f971ddca8dabd8d1aff5c9bf1))
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* ghpages: make sure .nojekyll exists after purging old html docs ([`4847845`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/4847845cc06884b6e589b26897e83411d649ef4d))
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## v1.2.1 (2025-07-11)
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Metadata-Version: 2.4
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Name: jupyter-analysis-tools
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Version: 1.
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Version: 1.3.0
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Summary: Yet another Python library with helpers and utilities for data analysis and processing.
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Author-email: Ingo Breßler <dev@ingobressler.net>
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License: MIT license
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:target: https://pypi.org/project/jupyter-analysis-tools
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:target: https://github.com/BAMresearch/jupyter-analysis-tools/compare/v1.3.0...main
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.. |license| image:: https://img.shields.io/pypi/l/jupyter-analysis-tools.svg
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### Continuous integration
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* testing: test on Windows as well ([`4a83c39`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/4a83c3924bcb820ef0728af40b86a0f6622dfef2))
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### Features
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### Documentation
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* pyproject: specify readme+changelog document types to render overview on pypi correctly ([`6e4d1e5`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/6e4d1e56640b604f971ddca8dabd8d1aff5c9bf1))
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:target: https://github.com/BAMresearch/jupyter-analysis-tools/compare/v1.3.0...main
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.. |license| image:: https://img.shields.io/pypi/l/jupyter-analysis-tools.svg
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* pyproject: specify readme+changelog document types to render overview on pypi correctly ([`6e4d1e5`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/6e4d1e56640b604f971ddca8dabd8d1aff5c9bf1))
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* ghpages: make sure .nojekyll exists after purging old html docs ([`4847845`](https://github.com/BAMresearch/jupyter-analysis-tools/commit/4847845cc06884b6e589b26897e83411d649ef4d))
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}
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},
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"AP_SAXSess": {
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"camera::AP_SAXSess#0": {
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"id": "camera::AP_SAXSess#0",
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@@ -573,11 +568,10 @@
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}
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"PI_SCX4300": {
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"detector:ccd:PI_SCX4300#0": {
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"id": "detector:ccd:PI_SCX4300#0",
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"Y": 1
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}
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},
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"AP_TCS120": {
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"holder::AP_TCS120#0": {
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},
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"AP_TCU50": {
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@@ -26,17 +26,28 @@ def test_readdata1(capsys):
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assert df.columns.tolist() == ["q", "I", "e"]
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df.loc[:2].values
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== numpy.array(
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[
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[-1.005583e00, 5.555556e-08, 2.754402e-08],
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[-9.989474e-01, 3.611111e-07, 6.568830e-08],
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[-9.923112e-01, 3.055556e-07, 6.120415e-08],
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]
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)
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)
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# and checking the last data values
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assert numpy.all(
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-
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-
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-
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assert numpy.all(
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df.loc[df.shape[0] - 3 :].values
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== numpy.array(
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[
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[7.381979e00, 2.972222e-06, 1.792166e-07],
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[7.388376e00, 2.944444e-06, 1.436040e-07],
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[7.394774e00, 2.388889e-06, 1.548690e-07],
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]
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)
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)
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assert numpy.all(df.median().values == numpy.array([3.233221e00, 5.826389e-05, 8.835466e-07]))
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def test_readdata2(capsys):
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@@ -48,8 +59,7 @@ def test_readdata2(capsys):
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assert fn == "S2843"
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assert df.shape == (427, 3)
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-
assert numpy.all(df.median().values == numpy.array(
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-
[1.470428, 0.01907878, 0.01353293]))
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+
assert numpy.all(df.median().values == numpy.array([1.470428, 0.01907878, 0.01353293]))
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def test_readPDHmeta1():
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@@ -62,7 +72,7 @@ def test_readPDHmeta1():
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# writing the test JSON for comparisons on updates
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# with open(pathPDH1.with_suffix(".json"), "w") as fd:
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#
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# json.dump(data, fd, indent=4)
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# it with the expected reference from testdata dir
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@@ -97,8 +107,9 @@ def test_readSSF():
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# json.dump(data, fd, indent=4)
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# and compare it with the expected JSON file from testdata dir
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-
with open(pathSSFZ.with_suffix(".ssf.json")) as fdRef,
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-
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with open(pathSSFZ.with_suffix(".ssf.json")) as fdRef, tempfile.TemporaryFile(
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"w+"
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) as fdNew:
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json.dump(data, fdNew, indent=4)
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fdNew.seek(0)
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assert fdRef.read() == fdNew.read()
|
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@@ -0,0 +1,80 @@
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# -*- coding: utf-8 -*-
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# tests/utils.py
|
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import os
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from pathlib import Path
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from jupyter_analysis_tools.utils import (
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appendToPATH,
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isWindows,
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makeNetworkdriveAbsolute,
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networkdriveMapping,
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)
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+
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# output of 'net use' command on Windows
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outNetUse = r"""Neue Verbindungen werden gespeichert.
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Status Lokal Remote Netzwerk
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-------------------------------------------------------------------------------
|
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OK G: \\ALPHA\BETA Microsoft Windows Network
|
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OK K: \\GAM\MMA Microsoft Windows Network
|
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OK M: \\user\drive\uname Microsoft Windows Network
|
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OK T: \\test\foldername Microsoft Windows Network
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OK \\psi\folder Microsoft Windows Network
|
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Der Befehl wurde erfolgreich ausgeführt.
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"""
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def test_appendToPATH(capsys):
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# Setting up a PATH for testing first (platform dependent).
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testpath = "/usr/local/sbin:/usr/local/bin:/sbin:/usr/games:/usr/local/games:/snap/bin"
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if isWindows():
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testpath = "something else"
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os.environ["PATH"] = testpath
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assert os.environ["PATH"] == testpath
|
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if not isWindows(): # Linux edition
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appendToPATH("/tmp", ("one", "two"), verbose=True)
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+
captured = capsys.readouterr()
|
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assert (
|
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captured.out
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== """\
|
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/tmp/one [exists: False]
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/tmp/two [exists: False]
|
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47
|
+
"""
|
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48
|
+
)
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|
+
assert os.environ["PATH"] == testpath + ":/tmp/one:/tmp/two"
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+
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+
else: # Windows edition
|
|
52
|
+
appendToPATH(r"C:\Windows", ("one", "two"), verbose=True)
|
|
53
|
+
captured = capsys.readouterr()
|
|
54
|
+
assert (
|
|
55
|
+
captured.out
|
|
56
|
+
== """\
|
|
57
|
+
C:\\Windows\\one [exists: False]
|
|
58
|
+
C:\\Windows\\two [exists: False]
|
|
59
|
+
"""
|
|
60
|
+
)
|
|
61
|
+
assert os.environ["PATH"] == testpath + r";C:\Windows\one;C:\Windows\two"
|
|
62
|
+
|
|
63
|
+
|
|
64
|
+
def test_networkdriveMapping():
|
|
65
|
+
if isWindows():
|
|
66
|
+
map = networkdriveMapping(cmdOutput=outNetUse)
|
|
67
|
+
assert map == {
|
|
68
|
+
"G:": "\\\\ALPHA\\BETA",
|
|
69
|
+
"K:": "\\\\GAM\\MMA",
|
|
70
|
+
"M:": "\\\\user\\drive\\uname",
|
|
71
|
+
"T:": "\\\\test\\foldername",
|
|
72
|
+
}
|
|
73
|
+
|
|
74
|
+
|
|
75
|
+
def test_makeNetworkdriveAbsolute():
|
|
76
|
+
if isWindows():
|
|
77
|
+
filepath = Path(r"M:\some\folders\a file name.ext")
|
|
78
|
+
newpath = makeNetworkdriveAbsolute(filepath, cmdOutput=outNetUse)
|
|
79
|
+
assert filepath != newpath
|
|
80
|
+
assert newpath == Path(r"\\user\drive\uname\some\folders\a file name.ext")
|
|
@@ -1,34 +0,0 @@
|
|
|
1
|
-
# -*- coding: utf-8 -*-
|
|
2
|
-
# tests/utils.py
|
|
3
|
-
|
|
4
|
-
|
|
5
|
-
import os
|
|
6
|
-
|
|
7
|
-
from jupyter_analysis_tools.utils import appendToPATH, isWindows
|
|
8
|
-
|
|
9
|
-
|
|
10
|
-
def test_appendToPATH(capsys):
|
|
11
|
-
# Setting up a PATH for testing first (platform dependent).
|
|
12
|
-
testpath = "/usr/local/sbin:/usr/local/bin:/sbin:/usr/games:/usr/local/games:/snap/bin"
|
|
13
|
-
if isWindows():
|
|
14
|
-
testpath = "something else"
|
|
15
|
-
os.environ["PATH"] = testpath
|
|
16
|
-
assert os.environ["PATH"] == testpath
|
|
17
|
-
|
|
18
|
-
if not isWindows(): # Linux edition
|
|
19
|
-
appendToPATH("/tmp", ("one", "two"), verbose=True)
|
|
20
|
-
captured = capsys.readouterr()
|
|
21
|
-
assert captured.out == """\
|
|
22
|
-
/tmp/one [exists: False]
|
|
23
|
-
/tmp/two [exists: False]
|
|
24
|
-
"""
|
|
25
|
-
assert os.environ["PATH"] == testpath+":/tmp/one:/tmp/two"
|
|
26
|
-
|
|
27
|
-
else: # Windows edition
|
|
28
|
-
appendToPATH(r"C:\Windows", ("one", "two"), verbose=True)
|
|
29
|
-
captured = capsys.readouterr()
|
|
30
|
-
assert captured.out == """\
|
|
31
|
-
C:\\Windows\\one [exists: False]
|
|
32
|
-
C:\\Windows\\two [exists: False]
|
|
33
|
-
"""
|
|
34
|
-
assert os.environ["PATH"] == testpath+r";C:\Windows\one;C:\Windows\two"
|
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{jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/src/jupyter_analysis_tools/analysis.py
RENAMED
|
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{jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/src/jupyter_analysis_tools/binning.py
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{jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/src/jupyter_analysis_tools/distrib.py
RENAMED
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{jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/src/jupyter_analysis_tools/git.py
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{jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/src/jupyter_analysis_tools/plotting.py
RENAMED
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{jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/src/jupyter_analysis_tools/widgets.py
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{jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/testdata/2015-03-20-Silica.ssf.json
RENAMED
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{jupyter_analysis_tools-1.2.1 → jupyter_analysis_tools-1.3.0}/testdata/2015-03-20-Silica.ssfz
RENAMED
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