junifer 0.0.7.dev332__tar.gz → 0.0.7.dev334__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (514) hide show
  1. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/PKG-INFO +1 -1
  2. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/whats_new.rst +119 -0
  3. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/_version.py +3 -3
  4. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer.egg-info/PKG-INFO +1 -1
  5. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer.egg-info/SOURCES.txt +0 -43
  6. junifer-0.0.7.dev332/docs/changes/newsfragments/231.change +0 -1
  7. junifer-0.0.7.dev332/docs/changes/newsfragments/231.misc +0 -1
  8. junifer-0.0.7.dev332/docs/changes/newsfragments/257.change +0 -1
  9. junifer-0.0.7.dev332/docs/changes/newsfragments/257.enh +0 -1
  10. junifer-0.0.7.dev332/docs/changes/newsfragments/333.enh +0 -1
  11. junifer-0.0.7.dev332/docs/changes/newsfragments/429.change +0 -1
  12. junifer-0.0.7.dev332/docs/changes/newsfragments/429.enh +0 -1
  13. junifer-0.0.7.dev332/docs/changes/newsfragments/432.feature +0 -1
  14. junifer-0.0.7.dev332/docs/changes/newsfragments/441.misc +0 -1
  15. junifer-0.0.7.dev332/docs/changes/newsfragments/443.feature +0 -1
  16. junifer-0.0.7.dev332/docs/changes/newsfragments/444.bugfix +0 -1
  17. junifer-0.0.7.dev332/docs/changes/newsfragments/450.doc +0 -1
  18. junifer-0.0.7.dev332/docs/changes/newsfragments/450.feature +0 -1
  19. junifer-0.0.7.dev332/docs/changes/newsfragments/451.doc +0 -1
  20. junifer-0.0.7.dev332/docs/changes/newsfragments/451.feature +0 -1
  21. junifer-0.0.7.dev332/docs/changes/newsfragments/452.doc +0 -1
  22. junifer-0.0.7.dev332/docs/changes/newsfragments/452.feature +0 -1
  23. junifer-0.0.7.dev332/docs/changes/newsfragments/454.bugfix +0 -1
  24. junifer-0.0.7.dev332/docs/changes/newsfragments/456.misc +0 -1
  25. junifer-0.0.7.dev332/docs/changes/newsfragments/457.misc +0 -1
  26. junifer-0.0.7.dev332/docs/changes/newsfragments/458.change +0 -1
  27. junifer-0.0.7.dev332/docs/changes/newsfragments/458.feature +0 -1
  28. junifer-0.0.7.dev332/docs/changes/newsfragments/458.misc +0 -1
  29. junifer-0.0.7.dev332/docs/changes/newsfragments/460.feature +0 -1
  30. junifer-0.0.7.dev332/docs/changes/newsfragments/462.feature +0 -1
  31. junifer-0.0.7.dev332/docs/changes/newsfragments/464.misc +0 -1
  32. junifer-0.0.7.dev332/docs/changes/newsfragments/465.misc +0 -1
  33. junifer-0.0.7.dev332/docs/changes/newsfragments/466.misc +0 -1
  34. junifer-0.0.7.dev332/docs/changes/newsfragments/467.misc +0 -1
  35. junifer-0.0.7.dev332/docs/changes/newsfragments/468.misc +0 -1
  36. junifer-0.0.7.dev332/docs/changes/newsfragments/470.enh +0 -1
  37. junifer-0.0.7.dev332/docs/changes/newsfragments/470.misc +0 -1
  38. junifer-0.0.7.dev332/docs/changes/newsfragments/472.enh +0 -1
  39. junifer-0.0.7.dev332/docs/changes/newsfragments/473.enh +0 -1
  40. junifer-0.0.7.dev332/docs/changes/newsfragments/476.enh +0 -1
  41. junifer-0.0.7.dev332/docs/changes/newsfragments/477.enh +0 -1
  42. junifer-0.0.7.dev332/docs/changes/newsfragments/481.bugfix +0 -1
  43. junifer-0.0.7.dev332/docs/changes/newsfragments/483.misc +0 -1
  44. junifer-0.0.7.dev332/docs/changes/newsfragments/485.misc +0 -1
  45. junifer-0.0.7.dev332/docs/changes/newsfragments/486.enh +0 -1
  46. junifer-0.0.7.dev332/docs/changes/newsfragments/486.misc +0 -1
  47. junifer-0.0.7.dev332/docs/changes/newsfragments/487.bugfix +0 -1
  48. junifer-0.0.7.dev332/docs/changes/newsfragments/489.misc +0 -1
  49. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/.dockerignore +0 -0
  50. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/.github/ISSUE_TEMPLATE/bug-report.yml +0 -0
  51. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/.github/ISSUE_TEMPLATE/config.yml +0 -0
  52. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/.github/ISSUE_TEMPLATE/dataset-request.yml +0 -0
  53. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/.github/ISSUE_TEMPLATE/documention-request.yml +0 -0
  54. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/.github/ISSUE_TEMPLATE/feature-request.yml +0 -0
  55. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/.github/ISSUE_TEMPLATE/marker-request.yml +0 -0
  56. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/.github/dependabot.yml +0 -0
  57. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/.github/pull_request_template.md +0 -0
  58. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/.github/workflows/check-stale.yml +0 -0
  59. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/.github/workflows/ci-docs.yml +0 -0
  60. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/.github/workflows/ci.yml +0 -0
  61. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/.github/workflows/docker-ci-publish.yml +0 -0
  62. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/.github/workflows/docker-docs-publish.yml +0 -0
  63. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/.github/workflows/docker-publish.yml +0 -0
  64. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/.github/workflows/docs-preview.yml +0 -0
  65. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/.github/workflows/docs.yml +0 -0
  66. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/.github/workflows/lint.yml +0 -0
  67. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/.github/workflows/publish.yml +0 -0
  68. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/.gitignore +0 -0
  69. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/.gitmodules +0 -0
  70. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/.pre-commit-config.yaml +0 -0
  71. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/AUTHORS.rst +0 -0
  72. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/Dockerfile +0 -0
  73. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/Dockerfile-ci +0 -0
  74. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/Dockerfile-docs +0 -0
  75. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/LICENSE.md +0 -0
  76. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/README.md +0 -0
  77. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/codecov.yml +0 -0
  78. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/conda-env.yml +0 -0
  79. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/Makefile +0 -0
  80. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/_static/css/custom.css +0 -0
  81. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/_static/js/custom.js +0 -0
  82. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/_templates/versions.html +0 -0
  83. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/api/api.rst +0 -0
  84. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/api/cli.rst +0 -0
  85. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/api/configs.rst +0 -0
  86. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/api/data.rst +0 -0
  87. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/api/datagrabbers.rst +0 -0
  88. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/api/datareaders.rst +0 -0
  89. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/api/index.rst +0 -0
  90. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/api/markers.rst +0 -0
  91. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/api/nilearn.rst +0 -0
  92. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/api/onthefly.rst +0 -0
  93. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/api/pipeline.rst +0 -0
  94. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/api/preprocessing.rst +0 -0
  95. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/api/stats.rst +0 -0
  96. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/api/storage.rst +0 -0
  97. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/api/testing.rst +0 -0
  98. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/api/utils.rst +0 -0
  99. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/builtin.rst +0 -0
  100. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/changes/contributors.inc +0 -0
  101. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/changes/newsfragments/.gitignore +0 -0
  102. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/conf.py +0 -0
  103. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/contribution.rst +0 -0
  104. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/extending/coordinates.rst +0 -0
  105. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/extending/data_dump_asset.rst +0 -0
  106. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/extending/data_registries.rst +0 -0
  107. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/extending/data_types.rst +0 -0
  108. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/extending/datagrabber.rst +0 -0
  109. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/extending/dependencies.rst +0 -0
  110. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/extending/extension.rst +0 -0
  111. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/extending/index.rst +0 -0
  112. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/extending/maps.rst +0 -0
  113. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/extending/marker.rst +0 -0
  114. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/extending/masks.rst +0 -0
  115. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/extending/parcellations.rst +0 -0
  116. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/extending/plugins.rst +0 -0
  117. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/extending/preprocessor.rst +0 -0
  118. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/faq.rst +0 -0
  119. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/help.rst +0 -0
  120. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/images/junifer_logo.png +0 -0
  121. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/index.rst +0 -0
  122. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/installation.rst +0 -0
  123. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/links.inc +0 -0
  124. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/maintaining.rst +0 -0
  125. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/redirect.html +0 -0
  126. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/starting.rst +0 -0
  127. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/understanding/data.rst +0 -0
  128. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/understanding/datagrabber.rst +0 -0
  129. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/understanding/datareader.rst +0 -0
  130. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/understanding/index.rst +0 -0
  131. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/understanding/marker.rst +0 -0
  132. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/understanding/pipeline.rst +0 -0
  133. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/understanding/preprocess.rst +0 -0
  134. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/understanding/storage.rst +0 -0
  135. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/using/codeless.rst +0 -0
  136. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/using/configuring.rst +0 -0
  137. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/using/dumping.rst +0 -0
  138. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/using/index.rst +0 -0
  139. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/using/masks.rst +0 -0
  140. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/using/queueing.rst +0 -0
  141. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/using/running.rst +0 -0
  142. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/examples/README.rst +0 -0
  143. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/examples/norun_hcpfc_pearson.py +0 -0
  144. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/examples/norun_ukbvm_gmd.py +0 -0
  145. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/examples/run_compute_parcel_mean.py +0 -0
  146. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/examples/run_datagrabber_bids_datalad.py +0 -0
  147. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/examples/run_ets_rss_marker.py +0 -0
  148. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/examples/run_junifer_julearn.py +0 -0
  149. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/examples/run_run_gmd_mean.py +0 -0
  150. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/examples/yamls/gmd_mean.yaml +0 -0
  151. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/examples/yamls/gmd_mean_htcondor.yaml +0 -0
  152. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/examples/yamls/partly_cloudy_agg_mean_tian.yml +0 -0
  153. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/examples/yamls/ukb_gmd_mean.yaml +0 -0
  154. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/ignore_words.txt +0 -0
  155. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/__init__.py +0 -0
  156. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/__init__.pyi +0 -0
  157. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/api/__init__.py +0 -0
  158. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/api/__init__.pyi +0 -0
  159. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/api/decorators.py +0 -0
  160. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/api/functions.py +0 -0
  161. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/api/py.typed +0 -0
  162. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/api/queue_context/__init__.py +0 -0
  163. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/api/queue_context/__init__.pyi +0 -0
  164. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/api/queue_context/gnu_parallel_local_adapter.py +0 -0
  165. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/api/queue_context/htcondor_adapter.py +0 -0
  166. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/api/queue_context/py.typed +0 -0
  167. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/api/queue_context/queue_context_adapter.py +0 -0
  168. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/api/queue_context/tests/test_gnu_parallel_local_adapter.py +0 -0
  169. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/api/queue_context/tests/test_htcondor_adapter.py +0 -0
  170. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/api/res/afni/3dAFNItoNIFTI +0 -0
  171. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/api/res/afni/3dRSFC +0 -0
  172. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/api/res/afni/3dReHo +0 -0
  173. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/api/res/afni/afni +0 -0
  174. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/api/res/afni/run_afni_docker.sh +0 -0
  175. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/api/res/ants/ResampleImage +0 -0
  176. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/api/res/ants/antsApplyTransforms +0 -0
  177. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/api/res/ants/antsApplyTransformsToPoints +0 -0
  178. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/api/res/ants/run_ants_docker.sh +0 -0
  179. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/api/res/freesurfer/mri_binarize +0 -0
  180. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/api/res/freesurfer/mri_mc +0 -0
  181. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/api/res/freesurfer/mri_pretess +0 -0
  182. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/api/res/freesurfer/mris_convert +0 -0
  183. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/api/res/freesurfer/run_freesurfer_docker.sh +0 -0
  184. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/api/res/fsl/applywarp +0 -0
  185. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/api/res/fsl/flirt +0 -0
  186. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/api/res/fsl/img2imgcoord +0 -0
  187. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/api/res/fsl/run_fsl_docker.sh +0 -0
  188. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/api/res/fsl/std2imgcoord +0 -0
  189. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/api/res/run_conda.bash +0 -0
  190. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/api/res/run_conda.zsh +0 -0
  191. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/api/res/run_venv.bash +0 -0
  192. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/api/res/run_venv.zsh +0 -0
  193. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/api/tests/test_decorators.py +0 -0
  194. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/api/tests/test_functions.py +0 -0
  195. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/cli/__init__.py +0 -0
  196. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/cli/__init__.pyi +0 -0
  197. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/cli/cli.py +0 -0
  198. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/cli/parser.py +0 -0
  199. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/cli/py.typed +0 -0
  200. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/cli/tests/data/gmd_mean.yaml +0 -0
  201. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/cli/tests/data/gmd_mean_htcondor.yaml +0 -0
  202. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/cli/tests/data/partly_cloudy_agg_mean_tian.yml +0 -0
  203. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/cli/tests/test_cli.py +0 -0
  204. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/cli/tests/test_cli_utils.py +0 -0
  205. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/cli/tests/test_parser.py +0 -0
  206. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/cli/utils.py +0 -0
  207. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/configs/__init__.py +0 -0
  208. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/configs/juseless/__init__.py +0 -0
  209. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/configs/juseless/__init__.pyi +0 -0
  210. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/configs/juseless/datagrabbers/__init__.py +0 -0
  211. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/configs/juseless/datagrabbers/__init__.pyi +0 -0
  212. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/configs/juseless/datagrabbers/aomic_id1000_vbm.py +0 -0
  213. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/configs/juseless/datagrabbers/camcan_vbm.py +0 -0
  214. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/configs/juseless/datagrabbers/ixi_vbm.py +0 -0
  215. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/configs/juseless/datagrabbers/py.typed +0 -0
  216. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/configs/juseless/datagrabbers/tests/test_aomic_id1000_vbm.py +0 -0
  217. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/configs/juseless/datagrabbers/tests/test_camcan_vbm.py +0 -0
  218. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/configs/juseless/datagrabbers/tests/test_ixi_vbm.py +0 -0
  219. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/configs/juseless/datagrabbers/tests/test_ucla.py +0 -0
  220. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/configs/juseless/datagrabbers/tests/test_ukb_vbm.py +0 -0
  221. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/configs/juseless/datagrabbers/ucla.py +0 -0
  222. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/configs/juseless/datagrabbers/ukb_vbm.py +0 -0
  223. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/configs/juseless/py.typed +0 -0
  224. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/conftest.py +0 -0
  225. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/data/__init__.py +0 -0
  226. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/data/__init__.pyi +0 -0
  227. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/data/_dispatch.py +0 -0
  228. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/data/coordinates/__init__.py +0 -0
  229. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/data/coordinates/__init__.pyi +0 -0
  230. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/data/coordinates/_ants_coordinates_warper.py +0 -0
  231. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/data/coordinates/_coordinates.py +0 -0
  232. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/data/coordinates/_fsl_coordinates_warper.py +0 -0
  233. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/data/coordinates/tests/test_coordinates.py +0 -0
  234. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/data/maps/__init__.py +0 -0
  235. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/data/maps/__init__.pyi +0 -0
  236. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/data/maps/_ants_maps_warper.py +0 -0
  237. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/data/maps/_fsl_maps_warper.py +0 -0
  238. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/data/maps/_maps.py +0 -0
  239. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/data/maps/tests/test_maps.py +0 -0
  240. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/data/masks/__init__.py +0 -0
  241. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/data/masks/__init__.pyi +0 -0
  242. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/data/masks/_ants_mask_warper.py +0 -0
  243. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/data/masks/_fsl_mask_warper.py +0 -0
  244. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/data/masks/_masks.py +0 -0
  245. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/data/masks/tests/test_masks.py +0 -0
  246. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/data/parcellations/__init__.py +0 -0
  247. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/data/parcellations/__init__.pyi +0 -0
  248. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/data/parcellations/_ants_parcellation_warper.py +0 -0
  249. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/data/parcellations/_fsl_parcellation_warper.py +0 -0
  250. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/data/parcellations/_parcellations.py +0 -0
  251. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/data/parcellations/tests/test_parcellations.py +0 -0
  252. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/data/pipeline_data_registry_base.py +0 -0
  253. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/data/py.typed +0 -0
  254. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/data/template_spaces.py +0 -0
  255. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/data/tests/test_data_utils.py +0 -0
  256. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/data/tests/test_dispatch.py +0 -0
  257. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/data/tests/test_template_spaces.py +0 -0
  258. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/data/utils.py +0 -0
  259. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/datagrabber/__init__.py +0 -0
  260. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/datagrabber/__init__.pyi +0 -0
  261. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/datagrabber/aomic/__init__.py +0 -0
  262. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/datagrabber/aomic/__init__.pyi +0 -0
  263. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/datagrabber/aomic/id1000.py +0 -0
  264. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/datagrabber/aomic/piop1.py +0 -0
  265. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/datagrabber/aomic/piop2.py +0 -0
  266. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/datagrabber/aomic/py.typed +0 -0
  267. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/datagrabber/aomic/tests/test_id1000.py +0 -0
  268. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/datagrabber/aomic/tests/test_piop1.py +0 -0
  269. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/datagrabber/aomic/tests/test_piop2.py +0 -0
  270. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/datagrabber/base.py +0 -0
  271. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/datagrabber/datalad_base.py +0 -0
  272. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/datagrabber/dmcc13_benchmark.py +0 -0
  273. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/datagrabber/hcp1200/__init__.py +0 -0
  274. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/datagrabber/hcp1200/__init__.pyi +0 -0
  275. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/datagrabber/hcp1200/datalad_hcp1200.py +0 -0
  276. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/datagrabber/hcp1200/hcp1200.py +0 -0
  277. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/datagrabber/hcp1200/py.typed +0 -0
  278. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/datagrabber/hcp1200/tests/test_hcp1200.py +0 -0
  279. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/datagrabber/multiple.py +0 -0
  280. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/datagrabber/pattern.py +0 -0
  281. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/datagrabber/pattern_datalad.py +0 -0
  282. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/datagrabber/pattern_validation_mixin.py +0 -0
  283. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/datagrabber/py.typed +0 -0
  284. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/datagrabber/tests/test_base.py +0 -0
  285. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/datagrabber/tests/test_datalad_base.py +0 -0
  286. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/datagrabber/tests/test_dmcc13_benchmark.py +0 -0
  287. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/datagrabber/tests/test_multiple.py +0 -0
  288. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/datagrabber/tests/test_pattern.py +0 -0
  289. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/datagrabber/tests/test_pattern_datalad.py +0 -0
  290. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/datagrabber/tests/test_pattern_validation_mixin.py +0 -0
  291. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/datareader/__init__.py +0 -0
  292. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/datareader/__init__.pyi +0 -0
  293. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/datareader/default.py +0 -0
  294. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/datareader/py.typed +0 -0
  295. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/datareader/tests/test_default_reader.py +0 -0
  296. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/external/BrainPrint/brainprint/__init__.py +0 -0
  297. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/external/BrainPrint/brainprint/_version.py +0 -0
  298. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/external/BrainPrint/brainprint/asymmetry.py +0 -0
  299. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/external/BrainPrint/brainprint/brainprint.py +0 -0
  300. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/external/BrainPrint/brainprint/surfaces.py +0 -0
  301. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/external/BrainPrint/brainprint/utils/__init__.py +0 -0
  302. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/external/BrainPrint/brainprint/utils/_config.py +0 -0
  303. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/external/BrainPrint/brainprint/utils/utils.py +0 -0
  304. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/external/__init__.py +0 -0
  305. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/external/h5io/h5io/__init__.py +0 -0
  306. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/external/h5io/h5io/_h5io.py +0 -0
  307. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/external/h5io/h5io/_version.py +0 -0
  308. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/external/h5io/h5io/chunked_array.py +0 -0
  309. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/external/h5io/h5io/chunked_list.py +0 -0
  310. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/external/nilearn/__init__.py +0 -0
  311. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/external/nilearn/__init__.pyi +0 -0
  312. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/external/nilearn/junifer_connectivity_measure.py +0 -0
  313. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/external/nilearn/junifer_nifti_spheres_masker.py +0 -0
  314. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/external/nilearn/py.typed +0 -0
  315. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/external/nilearn/tests/test_junifer_connectivity_measure.py +0 -0
  316. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/external/nilearn/tests/test_junifer_nifti_spheres_masker.py +0 -0
  317. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/__init__.py +0 -0
  318. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/__init__.pyi +0 -0
  319. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/base.py +0 -0
  320. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/brainprint.py +0 -0
  321. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/complexity/__init__.py +0 -0
  322. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/complexity/__init__.pyi +0 -0
  323. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/complexity/complexity_base.py +0 -0
  324. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/complexity/hurst_exponent.py +0 -0
  325. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/complexity/multiscale_entropy_auc.py +0 -0
  326. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/complexity/perm_entropy.py +0 -0
  327. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/complexity/py.typed +0 -0
  328. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/complexity/range_entropy.py +0 -0
  329. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/complexity/range_entropy_auc.py +0 -0
  330. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/complexity/sample_entropy.py +0 -0
  331. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/complexity/tests/test_complexity_base.py +0 -0
  332. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/complexity/tests/test_hurst_exponent.py +0 -0
  333. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/complexity/tests/test_multiscale_entropy_auc.py +0 -0
  334. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/complexity/tests/test_perm_entropy.py +0 -0
  335. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/complexity/tests/test_range_entropy.py +0 -0
  336. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/complexity/tests/test_range_entropy_auc.py +0 -0
  337. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/complexity/tests/test_sample_entropy.py +0 -0
  338. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/complexity/tests/test_weighted_perm_entropy.py +0 -0
  339. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/complexity/weighted_perm_entropy.py +0 -0
  340. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/ets_rss.py +0 -0
  341. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/falff/__init__.py +0 -0
  342. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/falff/__init__.pyi +0 -0
  343. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/falff/_afni_falff.py +0 -0
  344. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/falff/_junifer_falff.py +0 -0
  345. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/falff/falff_base.py +0 -0
  346. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/falff/falff_maps.py +0 -0
  347. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/falff/falff_parcels.py +0 -0
  348. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/falff/falff_spheres.py +0 -0
  349. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/falff/py.typed +0 -0
  350. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/falff/tests/test_falff_maps.py +0 -0
  351. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/falff/tests/test_falff_parcels.py +0 -0
  352. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/falff/tests/test_falff_spheres.py +0 -0
  353. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/functional_connectivity/__init__.py +0 -0
  354. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/functional_connectivity/__init__.pyi +0 -0
  355. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/functional_connectivity/crossparcellation_functional_connectivity.py +0 -0
  356. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/functional_connectivity/edge_functional_connectivity_maps.py +0 -0
  357. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/functional_connectivity/edge_functional_connectivity_parcels.py +0 -0
  358. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/functional_connectivity/edge_functional_connectivity_spheres.py +0 -0
  359. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/functional_connectivity/functional_connectivity_base.py +0 -0
  360. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/functional_connectivity/functional_connectivity_maps.py +0 -0
  361. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/functional_connectivity/functional_connectivity_parcels.py +0 -0
  362. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/functional_connectivity/functional_connectivity_spheres.py +0 -0
  363. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/functional_connectivity/py.typed +0 -0
  364. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/functional_connectivity/tests/test_crossparcellation_functional_connectivity.py +0 -0
  365. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/functional_connectivity/tests/test_edge_functional_connectivity_maps.py +0 -0
  366. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/functional_connectivity/tests/test_edge_functional_connectivity_parcels.py +0 -0
  367. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/functional_connectivity/tests/test_edge_functional_connectivity_spheres.py +0 -0
  368. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/functional_connectivity/tests/test_functional_connectivity_base.py +0 -0
  369. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/functional_connectivity/tests/test_functional_connectivity_maps.py +0 -0
  370. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/functional_connectivity/tests/test_functional_connectivity_parcels.py +0 -0
  371. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/functional_connectivity/tests/test_functional_connectivity_spheres.py +0 -0
  372. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/maps_aggregation.py +0 -0
  373. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/parcel_aggregation.py +0 -0
  374. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/py.typed +0 -0
  375. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/reho/__init__.py +0 -0
  376. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/reho/__init__.pyi +0 -0
  377. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/reho/_afni_reho.py +0 -0
  378. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/reho/_junifer_reho.py +0 -0
  379. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/reho/py.typed +0 -0
  380. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/reho/reho_base.py +0 -0
  381. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/reho/reho_maps.py +0 -0
  382. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/reho/reho_parcels.py +0 -0
  383. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/reho/reho_spheres.py +0 -0
  384. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/reho/tests/test_reho_maps.py +0 -0
  385. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/reho/tests/test_reho_parcels.py +0 -0
  386. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/reho/tests/test_reho_spheres.py +0 -0
  387. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/sphere_aggregation.py +0 -0
  388. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/temporal_snr/__init__.py +0 -0
  389. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/temporal_snr/__init__.pyi +0 -0
  390. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/temporal_snr/py.typed +0 -0
  391. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/temporal_snr/temporal_snr_base.py +0 -0
  392. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/temporal_snr/temporal_snr_maps.py +0 -0
  393. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/temporal_snr/temporal_snr_parcels.py +0 -0
  394. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/temporal_snr/temporal_snr_spheres.py +0 -0
  395. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/temporal_snr/tests/test_temporal_snr_base.py +0 -0
  396. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/temporal_snr/tests/test_temporal_snr_maps.py +0 -0
  397. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/temporal_snr/tests/test_temporal_snr_parcels.py +0 -0
  398. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/temporal_snr/tests/test_temporal_snr_spheres.py +0 -0
  399. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/tests/test_brainprint.py +0 -0
  400. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/tests/test_ets_rss.py +0 -0
  401. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/tests/test_maps_aggregation.py +0 -0
  402. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/tests/test_marker_utils.py +0 -0
  403. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/tests/test_markers_base.py +0 -0
  404. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/tests/test_parcel_aggregation.py +0 -0
  405. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/tests/test_sphere_aggregation.py +0 -0
  406. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/markers/utils.py +0 -0
  407. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/onthefly/__init__.py +0 -0
  408. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/onthefly/_brainprint.py +0 -0
  409. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/onthefly/read_transform.py +0 -0
  410. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/onthefly/tests/test_read_transform.py +0 -0
  411. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/pipeline/__init__.py +0 -0
  412. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/pipeline/__init__.pyi +0 -0
  413. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/pipeline/_data_object_dumper.py +0 -0
  414. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/pipeline/marker_collection.py +0 -0
  415. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/pipeline/pipeline_component_registry.py +0 -0
  416. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/pipeline/pipeline_step_mixin.py +0 -0
  417. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/pipeline/py.typed +0 -0
  418. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/pipeline/tests/test_data_object_dumper.py +0 -0
  419. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/pipeline/tests/test_marker_collection.py +0 -0
  420. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/pipeline/tests/test_pipeline_component_registry.py +0 -0
  421. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/pipeline/tests/test_pipeline_step_mixin.py +0 -0
  422. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/pipeline/tests/test_update_meta_mixin.py +0 -0
  423. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/pipeline/tests/test_workdir_manager.py +0 -0
  424. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/pipeline/update_meta_mixin.py +0 -0
  425. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/pipeline/utils.py +0 -0
  426. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/pipeline/workdir_manager.py +0 -0
  427. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/preprocess/__init__.py +0 -0
  428. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/preprocess/__init__.pyi +0 -0
  429. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/preprocess/_temporal_filter.py +0 -0
  430. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/preprocess/_temporal_slicer.py +0 -0
  431. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/preprocess/base.py +0 -0
  432. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/preprocess/confounds/__init__.py +0 -0
  433. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/preprocess/confounds/__init__.pyi +0 -0
  434. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/preprocess/confounds/fmriprep_confound_remover.py +0 -0
  435. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/preprocess/confounds/py.typed +0 -0
  436. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/preprocess/confounds/tests/test_fmriprep_confound_remover.py +0 -0
  437. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/preprocess/py.typed +0 -0
  438. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/preprocess/smoothing/__init__.py +0 -0
  439. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/preprocess/smoothing/__init__.pyi +0 -0
  440. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/preprocess/smoothing/_afni_smoothing.py +0 -0
  441. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/preprocess/smoothing/_fsl_smoothing.py +0 -0
  442. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/preprocess/smoothing/_nilearn_smoothing.py +0 -0
  443. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/preprocess/smoothing/py.typed +0 -0
  444. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/preprocess/smoothing/smoothing.py +0 -0
  445. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/preprocess/smoothing/tests/test_smoothing.py +0 -0
  446. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/preprocess/tests/test_preprocess_base.py +0 -0
  447. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/preprocess/tests/test_temporal_filter.py +0 -0
  448. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/preprocess/tests/test_temporal_slicer.py +0 -0
  449. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/preprocess/warping/__init__.py +0 -0
  450. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/preprocess/warping/__init__.pyi +0 -0
  451. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/preprocess/warping/_ants_warper.py +0 -0
  452. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/preprocess/warping/_fsl_warper.py +0 -0
  453. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/preprocess/warping/py.typed +0 -0
  454. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/preprocess/warping/space_warper.py +0 -0
  455. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/preprocess/warping/tests/test_space_warper.py +0 -0
  456. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/py.typed +0 -0
  457. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/stats.py +0 -0
  458. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/storage/__init__.py +0 -0
  459. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/storage/__init__.pyi +0 -0
  460. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/storage/base.py +0 -0
  461. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/storage/hdf5.py +0 -0
  462. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/storage/pandas_base.py +0 -0
  463. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/storage/py.typed +0 -0
  464. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/storage/sqlite.py +0 -0
  465. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/storage/tests/test_hdf5.py +0 -0
  466. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/storage/tests/test_pandas_base.py +0 -0
  467. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/storage/tests/test_sqlite.py +0 -0
  468. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/storage/tests/test_storage_base.py +0 -0
  469. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/storage/tests/test_utils.py +0 -0
  470. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/storage/utils.py +0 -0
  471. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/testing/__init__.py +0 -0
  472. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/testing/__init__.pyi +0 -0
  473. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/testing/data/sub-0001_task-anticipation_acq-seq_desc-confounds_regressors.tsv +0 -0
  474. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/testing/datagrabbers.py +0 -0
  475. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/testing/py.typed +0 -0
  476. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/testing/registry.py +0 -0
  477. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/testing/tests/test_oasisvmbtesting_datagrabber.py +0 -0
  478. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/testing/tests/test_partlycloudytesting_datagrabber.py +0 -0
  479. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/testing/tests/test_spmauditory_datagrabber.py +0 -0
  480. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/testing/tests/test_testing_registry.py +0 -0
  481. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/testing/utils.py +0 -0
  482. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/tests/test_main.py +0 -0
  483. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/tests/test_stats.py +0 -0
  484. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/typing/__init__.py +0 -0
  485. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/typing/__init__.pyi +0 -0
  486. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/typing/_typing.py +0 -0
  487. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/utils/__init__.py +0 -0
  488. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/utils/__init__.pyi +0 -0
  489. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/utils/_config.py +0 -0
  490. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/utils/_yaml.py +0 -0
  491. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/utils/fs.py +0 -0
  492. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/utils/helpers.py +0 -0
  493. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/utils/logging.py +0 -0
  494. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/utils/py.typed +0 -0
  495. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/utils/singleton.py +0 -0
  496. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/utils/tests/test_config.py +0 -0
  497. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/utils/tests/test_fs.py +0 -0
  498. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/utils/tests/test_helpers.py +0 -0
  499. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/utils/tests/test_logging.py +0 -0
  500. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer.egg-info/dependency_links.txt +0 -0
  501. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer.egg-info/entry_points.txt +0 -0
  502. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer.egg-info/requires.txt +0 -0
  503. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer.egg-info/top_level.txt +0 -0
  504. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/pyproject.toml +0 -0
  505. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/setup.cfg +0 -0
  506. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/setup.py +0 -0
  507. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/tools/create_aomic1000_example_dataset.py +0 -0
  508. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/tools/create_aomicpiop1_example_dataset.py +0 -0
  509. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/tools/create_aomicpiop2_example_dataset.py +0 -0
  510. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/tools/create_bids_example_dataset.py +0 -0
  511. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/tools/create_bids_example_dataset_sessions.py +0 -0
  512. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/tools/create_dmcc13_benchmark_example_dataset.py +0 -0
  513. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/tools/create_hcp1200_example_dataset.py +0 -0
  514. {junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/tox.ini +0 -0
{junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: junifer
3
- Version: 0.0.7.dev332
3
+ Version: 0.0.7.dev334
4
4
  Summary: JUelich NeuroImaging FEature extractoR
5
5
  Author-email: Fede Raimondo <f.raimondo@fz-juelich.de>, Synchon Mandal <s.mandal@fz-juelich.de>
6
6
  Maintainer-email: Fede Raimondo <f.raimondo@fz-juelich.de>, Synchon Mandal <s.mandal@fz-juelich.de>
{junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/docs/whats_new.rst RENAMED
@@ -10,6 +10,125 @@ What's new
10
10
 
11
11
  .. towncrier release notes start
12
12
 
13
+ Junifer 0.0.7 (2026-03-04)
14
+ --------------------------
15
+
16
+ Bugfixes
17
+ ^^^^^^^^
18
+
19
+ - Allow ``timeseries_2d`` storage for :class:`.HDF5FeatureStorage` by `Fede
20
+ Raimondo`_ (:gh:`444`)
21
+ - Fix FSL presence checking status code by `Fede Raimondo`_ (:gh:`454`)
22
+ - Bypass warper check for callable masks on native data by `Synchon Mandal`_
23
+ (:gh:`481`)
24
+ - Fix mask specification check involving dicts in
25
+ :class:`junifer.data.MaskRegistry` when working in native space by `Synchon
26
+ Mandal`_ (:gh:`487`)
27
+
28
+
29
+ API Changes
30
+ ^^^^^^^^^^^
31
+
32
+ - ``fname``, ``overwrite`` and ``output_format`` have been removed from
33
+ :func:`.configure_logging` by `Synchon Mandal`_ (:gh:`231`)
34
+ - ``ParcellationRegistry.get`` now returns labels as dictionary mapping from
35
+ values to labels instead of a list of labels by `Synchon Mandal`_ (:gh:`257`)
36
+ - :func:`.read_transform` has a new parameter ``nan_policy`` to handle NaN
37
+ values when transforming feature data by `Fede Raimondo`_ (:gh:`429`)
38
+ - :func:`.get_data`, :func:`.load_data`, :func:`.list_data`,
39
+ :func:`.register_data` and :func:`.deregister_data` now support ``"maps"`` as
40
+ a valid argument for ``kind`` by `Synchon Mandal`_ (:gh:`458`)
41
+
42
+
43
+ Improved Documentation
44
+ ^^^^^^^^^^^^^^^^^^^^^^
45
+
46
+ - Add documentation on extending data registries by `Synchon Mandal`_
47
+ (:gh:`450`)
48
+ - Add documentation on adding data types by `Synchon Mandal`_ (:gh:`451`)
49
+ - Add documentation on :class:`.ConfigManager`, dumping data object and
50
+ extending data dump assets by `Synchon Mandal`_ (:gh:`452`)
51
+
52
+
53
+ Enhancements
54
+ ^^^^^^^^^^^^
55
+
56
+ - Allow parcellation registration with non-continuous ranges as values by
57
+ `Synchon Mandal`_ (:gh:`257`)
58
+ - Add support for Chatterjee's xi correlation in
59
+ :class:`.JuniferConnectivityMeasure` by `Synchon Mandal`_ (:gh:`333`)
60
+ - Implement a NaN policy for :func:`.read_transform` by `Fede Raimondo`_
61
+ (:gh:`429`)
62
+ - Add FreeSurfer 7.4.1 aseg parcellation to :class:`.ParcellationRegistry` by
63
+ `Synchon Mandal`_ (:gh:`470`)
64
+ - Simplify ``Storage`` interface and implementations by `Synchon Mandal`_
65
+ (:gh:`472`)
66
+ - Simplify ``Preprocess`` interface and implementations by `Synchon Mandal`_
67
+ (:gh:`473`)
68
+ - Simplify :class:`.PipelineStepMixin` interface by `Synchon Mandal`_
69
+ (:gh:`476`)
70
+ - Improve ``Marker`` interface and implementations by `Synchon Mandal`_
71
+ (:gh:`477`)
72
+ - Add Glasser and Julich-Brain parcellations to :class:`.ParcellationRegistry`
73
+ by `Synchon Mandal`_ (:gh:`486`)
74
+
75
+
76
+ Features
77
+ ^^^^^^^^
78
+
79
+ - Introduce :class:`.TemporalFilter` preprocessor for temporally filtering BOLD
80
+ data by `Fede Raimondo`_ (:gh:`432`)
81
+ - Introduce :class:`.TemporalSlicer` preprocessor for temporally slicing BOLD
82
+ data by `Synchon Mandal`_ (:gh:`443`)
83
+ - Enable data registries to be extended by exposing
84
+ :class:`.BasePipelineDataRegistry` and introducing
85
+ :func:`.register_data_registry` decorator by `Synchon Mandal`_ (:gh:`450`)
86
+ - Enable data types to be added by introducing :func:`.register_data_type` by
87
+ `Synchon Mandal`_ (:gh:`451`)
88
+ - Allow pipeline data object to be dumped by introducing
89
+ :class:`.DataObjectDumper` and available dumping / loading assets to be
90
+ extended by introducing :func:`.register_data_dump_asset` decorator by
91
+ `Synchon Mandal`_ (:gh:`452`)
92
+ - Introduce :class:`.MapsRegistry` to centralise probabilistic atlas (maps)
93
+ data management by `Synchon Mandal`_ (:gh:`458`)
94
+ - Introduce :class:`.MapsAggregation`, :class:`.FunctionalConnectivityMaps`,
95
+ :class:`.EdgeCentricFCMaps`, :class:`.ReHoMaps`, :class:`.ALFFMaps` and
96
+ :class:`.TemporalSNRMaps` by `Synchon Mandal`_ (:gh:`460`)
97
+ - Enable :class:`.SpaceWarper` to warp data from native space to template
98
+ spaces via both FSL and ANTs by `Synchon Mandal`_ (:gh:`462`)
99
+
100
+
101
+ Miscellaneous
102
+ ^^^^^^^^^^^^^
103
+
104
+ - Adopt ``structlog`` for logging infrastructure by `Synchon Mandal`_
105
+ (:gh:`231`)
106
+ - Regular repository maintenance by updating ``.pre-commit-config.yaml``,
107
+ replacing ``black`` with ``ruff-format`` and updating tool configs by
108
+ `Synchon Mandal`_ (:gh:`441`)
109
+ - Bump ``junifer-data`` to ``v3`` for Docker images by `Synchon Mandal`_
110
+ (:gh:`456`)
111
+ - Bump ``junifer-data`` to ``v3`` by `Synchon Mandal`_ (:gh:`457`)
112
+ - Constrain ``templateflow`` version to ``>=23.0.0,<25.0.0`` by `Synchon
113
+ Mandal`_ (:gh:`458`)
114
+ - Add a new GitHub Action to mark stale issues by `Synchon Mandal`_ (:gh:`464`)
115
+ - Bump ``junifer-data`` to ``v4`` for Docker images by `Synchon Mandal`_
116
+ (:gh:`465`)
117
+ - Bump ``junifer-data`` to ``v4`` by `Synchon Mandal`_ (:gh:`466`)
118
+ - Disable FSL installation for ``junifer-ci`` Docker image build with
119
+ ``junifer-data`` v4 by `Synchon Mandal`_ (:gh:`467`)
120
+ - Pin ``junifer-ci`` Docker image to ``python:3.12-slim-bookworm`` and
121
+ re-enable FSL installation by `Synchon Mandal`_ (:gh:`468`)
122
+ - Bump ``junifer-data`` to ``v5`` by `Synchon Mandal`_ (:gh:`470`)
123
+ - Bump ``junifer-data`` to ``v6`` for Docker images by `Synchon Mandal`_
124
+ (:gh:`483`)
125
+ - Bump ``junifer-data`` to ``v7`` for Docker images by `Synchon Mandal`_
126
+ (:gh:`485`)
127
+ - Bump ``junifer-data`` to ``v7`` by `Synchon Mandal`_ (:gh:`486`)
128
+ - Add Dockerfile and a corresponding action for building and publishing the
129
+ image by `Fede Raimondo`_ and `Synchon Mandal`_ (:gh:`489`)
130
+
131
+
13
132
  Junifer 0.0.6 (2025-03-24)
14
133
  --------------------------
15
134
 
{junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer/_version.py RENAMED
@@ -28,7 +28,7 @@ version_tuple: VERSION_TUPLE
28
28
  commit_id: COMMIT_ID
29
29
  __commit_id__: COMMIT_ID
30
30
 
31
- __version__ = version = '0.0.7.dev332'
32
- __version_tuple__ = version_tuple = (0, 0, 7, 'dev332')
31
+ __version__ = version = '0.0.7.dev334'
32
+ __version_tuple__ = version_tuple = (0, 0, 7, 'dev334')
33
33
 
34
- __commit_id__ = commit_id = 'g52d8784c5'
34
+ __commit_id__ = commit_id = 'g9d87a015a'
{junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer.egg-info/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: junifer
3
- Version: 0.0.7.dev332
3
+ Version: 0.0.7.dev334
4
4
  Summary: JUelich NeuroImaging FEature extractoR
5
5
  Author-email: Fede Raimondo <f.raimondo@fz-juelich.de>, Synchon Mandal <s.mandal@fz-juelich.de>
6
6
  Maintainer-email: Fede Raimondo <f.raimondo@fz-juelich.de>, Synchon Mandal <s.mandal@fz-juelich.de>
{junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/junifer.egg-info/SOURCES.txt RENAMED
@@ -66,49 +66,6 @@ docs/api/testing.rst
66
66
  docs/api/utils.rst
67
67
  docs/changes/contributors.inc
68
68
  docs/changes/newsfragments/.gitignore
69
- docs/changes/newsfragments/231.change
70
- docs/changes/newsfragments/231.misc
71
- docs/changes/newsfragments/257.change
72
- docs/changes/newsfragments/257.enh
73
- docs/changes/newsfragments/333.enh
74
- docs/changes/newsfragments/429.change
75
- docs/changes/newsfragments/429.enh
76
- docs/changes/newsfragments/432.feature
77
- docs/changes/newsfragments/441.misc
78
- docs/changes/newsfragments/443.feature
79
- docs/changes/newsfragments/444.bugfix
80
- docs/changes/newsfragments/450.doc
81
- docs/changes/newsfragments/450.feature
82
- docs/changes/newsfragments/451.doc
83
- docs/changes/newsfragments/451.feature
84
- docs/changes/newsfragments/452.doc
85
- docs/changes/newsfragments/452.feature
86
- docs/changes/newsfragments/454.bugfix
87
- docs/changes/newsfragments/456.misc
88
- docs/changes/newsfragments/457.misc
89
- docs/changes/newsfragments/458.change
90
- docs/changes/newsfragments/458.feature
91
- docs/changes/newsfragments/458.misc
92
- docs/changes/newsfragments/460.feature
93
- docs/changes/newsfragments/462.feature
94
- docs/changes/newsfragments/464.misc
95
- docs/changes/newsfragments/465.misc
96
- docs/changes/newsfragments/466.misc
97
- docs/changes/newsfragments/467.misc
98
- docs/changes/newsfragments/468.misc
99
- docs/changes/newsfragments/470.enh
100
- docs/changes/newsfragments/470.misc
101
- docs/changes/newsfragments/472.enh
102
- docs/changes/newsfragments/473.enh
103
- docs/changes/newsfragments/476.enh
104
- docs/changes/newsfragments/477.enh
105
- docs/changes/newsfragments/481.bugfix
106
- docs/changes/newsfragments/483.misc
107
- docs/changes/newsfragments/485.misc
108
- docs/changes/newsfragments/486.enh
109
- docs/changes/newsfragments/486.misc
110
- docs/changes/newsfragments/487.bugfix
111
- docs/changes/newsfragments/489.misc
112
69
  docs/extending/coordinates.rst
113
70
  docs/extending/data_dump_asset.rst
114
71
  docs/extending/data_registries.rst
junifer-0.0.7.dev332/docs/changes/newsfragments/231.change DELETED
@@ -1 +0,0 @@
1
- ``fname``, ``overwrite`` and ``output_format`` have been removed from :func:`.configure_logging` by `Synchon Mandal`_
junifer-0.0.7.dev332/docs/changes/newsfragments/231.misc DELETED
@@ -1 +0,0 @@
1
- Adopt ``structlog`` for logging infrastructure by `Synchon Mandal`_
junifer-0.0.7.dev332/docs/changes/newsfragments/257.change DELETED
@@ -1 +0,0 @@
1
- ``ParcellationRegistry.get`` now returns labels as dictionary mapping from values to labels instead of a list of labels by `Synchon Mandal`_
junifer-0.0.7.dev332/docs/changes/newsfragments/257.enh DELETED
@@ -1 +0,0 @@
1
- Allow parcellation registration with non-continuous ranges as values by `Synchon Mandal`_
junifer-0.0.7.dev332/docs/changes/newsfragments/333.enh DELETED
@@ -1 +0,0 @@
1
- Add support for Chatterjee's xi correlation in :class:`.JuniferConnectivityMeasure` by `Synchon Mandal`_
junifer-0.0.7.dev332/docs/changes/newsfragments/429.change DELETED
@@ -1 +0,0 @@
1
- :func:`.read_transform` has a new parameter ``nan_policy`` to handle NaN values when transforming feature data by `Fede Raimondo`_
junifer-0.0.7.dev332/docs/changes/newsfragments/429.enh DELETED
@@ -1 +0,0 @@
1
- Implement a NaN policy for :func:`.read_transform` by `Fede Raimondo`_
junifer-0.0.7.dev332/docs/changes/newsfragments/432.feature DELETED
@@ -1 +0,0 @@
1
- Introduce :class:`.TemporalFilter` preprocessor for temporally filtering BOLD data by `Fede Raimondo`_
junifer-0.0.7.dev332/docs/changes/newsfragments/441.misc DELETED
@@ -1 +0,0 @@
1
- Regular repository maintenance by updating ``.pre-commit-config.yaml``, replacing ``black`` with ``ruff-format`` and updating tool configs by `Synchon Mandal`_
junifer-0.0.7.dev332/docs/changes/newsfragments/443.feature DELETED
@@ -1 +0,0 @@
1
- Introduce :class:`.TemporalSlicer` preprocessor for temporally slicing BOLD data by `Synchon Mandal`_
junifer-0.0.7.dev332/docs/changes/newsfragments/444.bugfix DELETED
@@ -1 +0,0 @@
1
- Allow ``timeseries_2d`` storage for :class:`.HDF5FeatureStorage` by `Fede Raimondo`_
junifer-0.0.7.dev332/docs/changes/newsfragments/450.doc DELETED
@@ -1 +0,0 @@
1
- Add documentation on extending data registries by `Synchon Mandal`_
junifer-0.0.7.dev332/docs/changes/newsfragments/450.feature DELETED
@@ -1 +0,0 @@
1
- Enable data registries to be extended by exposing :class:`.BasePipelineDataRegistry` and introducing :func:`.register_data_registry` decorator by `Synchon Mandal`_
junifer-0.0.7.dev332/docs/changes/newsfragments/451.doc DELETED
@@ -1 +0,0 @@
1
- Add documentation on adding data types by `Synchon Mandal`_
junifer-0.0.7.dev332/docs/changes/newsfragments/451.feature DELETED
@@ -1 +0,0 @@
1
- Enable data types to be added by introducing :func:`.register_data_type` by `Synchon Mandal`_
junifer-0.0.7.dev332/docs/changes/newsfragments/452.doc DELETED
@@ -1 +0,0 @@
1
- Add documentation on :class:`.ConfigManager`, dumping data object and extending data dump assets by `Synchon Mandal`_
junifer-0.0.7.dev332/docs/changes/newsfragments/452.feature DELETED
@@ -1 +0,0 @@
1
- Allow pipeline data object to be dumped by introducing :class:`.DataObjectDumper` and available dumping / loading assets to be extended by introducing :func:`.register_data_dump_asset` decorator by `Synchon Mandal`_
junifer-0.0.7.dev332/docs/changes/newsfragments/454.bugfix DELETED
@@ -1 +0,0 @@
1
- Fix FSL presence checking status code by `Fede Raimondo`_
junifer-0.0.7.dev332/docs/changes/newsfragments/456.misc DELETED
@@ -1 +0,0 @@
1
- Bump ``junifer-data`` to ``v3`` for Docker images by `Synchon Mandal`_
junifer-0.0.7.dev332/docs/changes/newsfragments/457.misc DELETED
@@ -1 +0,0 @@
1
- Bump ``junifer-data`` to ``v3`` by `Synchon Mandal`_
junifer-0.0.7.dev332/docs/changes/newsfragments/458.change DELETED
@@ -1 +0,0 @@
1
- :func:`.get_data`, :func:`.load_data`, :func:`.list_data`, :func:`.register_data` and :func:`.deregister_data` now support ``"maps"`` as a valid argument for ``kind`` by `Synchon Mandal`_
junifer-0.0.7.dev332/docs/changes/newsfragments/458.feature DELETED
@@ -1 +0,0 @@
1
- Introduce :class:`.MapsRegistry` to centralise probabilistic atlas (maps) data management by `Synchon Mandal`_
junifer-0.0.7.dev332/docs/changes/newsfragments/458.misc DELETED
@@ -1 +0,0 @@
1
- Constrain ``templateflow`` version to ``>=23.0.0,<25.0.0`` by `Synchon Mandal`_
junifer-0.0.7.dev332/docs/changes/newsfragments/460.feature DELETED
@@ -1 +0,0 @@
1
- Introduce :class:`.MapsAggregation`, :class:`.FunctionalConnectivityMaps`, :class:`.EdgeCentricFCMaps`, :class:`.ReHoMaps`, :class:`.ALFFMaps` and :class:`.TemporalSNRMaps` by `Synchon Mandal`_
junifer-0.0.7.dev332/docs/changes/newsfragments/462.feature DELETED
@@ -1 +0,0 @@
1
- Enable :class:`.SpaceWarper` to warp data from native space to template spaces via both FSL and ANTs by `Synchon Mandal`_
junifer-0.0.7.dev332/docs/changes/newsfragments/464.misc DELETED
@@ -1 +0,0 @@
1
- Add a new GitHub Action to mark stale issues by `Synchon Mandal`_
junifer-0.0.7.dev332/docs/changes/newsfragments/465.misc DELETED
@@ -1 +0,0 @@
1
- Bump ``junifer-data`` to ``v4`` for Docker images by `Synchon Mandal`_
junifer-0.0.7.dev332/docs/changes/newsfragments/466.misc DELETED
@@ -1 +0,0 @@
1
- Bump ``junifer-data`` to ``v4`` by `Synchon Mandal`_
junifer-0.0.7.dev332/docs/changes/newsfragments/467.misc DELETED
@@ -1 +0,0 @@
1
- Disable FSL installation for ``junifer-ci`` Docker image build with ``junifer-data`` v4 by `Synchon Mandal`_
junifer-0.0.7.dev332/docs/changes/newsfragments/468.misc DELETED
@@ -1 +0,0 @@
1
- Pin ``junifer-ci`` Docker image to ``python:3.12-slim-bookworm`` and re-enable FSL installation by `Synchon Mandal`_
junifer-0.0.7.dev332/docs/changes/newsfragments/470.enh DELETED
@@ -1 +0,0 @@
1
- Add FreeSurfer 7.4.1 aseg parcellation to :class:`.ParcellationRegistry` by `Synchon Mandal`_
junifer-0.0.7.dev332/docs/changes/newsfragments/470.misc DELETED
@@ -1 +0,0 @@
1
- Bump ``junifer-data`` to ``v5`` by `Synchon Mandal`_
junifer-0.0.7.dev332/docs/changes/newsfragments/472.enh DELETED
@@ -1 +0,0 @@
1
- Simplify ``Storage`` interface and implementations by `Synchon Mandal`_
junifer-0.0.7.dev332/docs/changes/newsfragments/473.enh DELETED
@@ -1 +0,0 @@
1
- Simplify ``Preprocess`` interface and implementations by `Synchon Mandal`_
junifer-0.0.7.dev332/docs/changes/newsfragments/476.enh DELETED
@@ -1 +0,0 @@
1
- Simplify :class:`.PipelineStepMixin` interface by `Synchon Mandal`_
junifer-0.0.7.dev332/docs/changes/newsfragments/477.enh DELETED
@@ -1 +0,0 @@
1
- Improve ``Marker`` interface and implementations by `Synchon Mandal`_
junifer-0.0.7.dev332/docs/changes/newsfragments/481.bugfix DELETED
@@ -1 +0,0 @@
1
- Bypass warper check for callable masks on native data by `Synchon Mandal`_
junifer-0.0.7.dev332/docs/changes/newsfragments/483.misc DELETED
@@ -1 +0,0 @@
1
- Bump ``junifer-data`` to ``v6`` for Docker images by `Synchon Mandal`_
junifer-0.0.7.dev332/docs/changes/newsfragments/485.misc DELETED
@@ -1 +0,0 @@
1
- Bump ``junifer-data`` to ``v7`` for Docker images by `Synchon Mandal`_
junifer-0.0.7.dev332/docs/changes/newsfragments/486.enh DELETED
@@ -1 +0,0 @@
1
- Add Glasser and Julich-Brain parcellations to :class:`.ParcellationRegistry` by `Synchon Mandal`_
junifer-0.0.7.dev332/docs/changes/newsfragments/486.misc DELETED
@@ -1 +0,0 @@
1
- Bump ``junifer-data`` to ``v7`` by `Synchon Mandal`_
junifer-0.0.7.dev332/docs/changes/newsfragments/487.bugfix DELETED
@@ -1 +0,0 @@
1
- Fix mask specification check involving dicts in `:class:`junifer.data.MaskRegistry` when working in native space by `Synchon Mandal`_
junifer-0.0.7.dev332/docs/changes/newsfragments/489.misc DELETED
@@ -1 +0,0 @@
1
- Add Dockerfile and a corresponding action for building and publishing the image by `Fede Raimondo`_ and `Synchon Mandal`_
{junifer-0.0.7.dev332 → junifer-0.0.7.dev334}/README.md RENAMED
File without changes