junifer 0.0.7.dev123__tar.gz → 0.0.7.dev130__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (465) hide show
  1. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/.github/workflows/ci.yml +2 -2
  2. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/.github/workflows/docs-preview.yml +2 -2
  3. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/.github/workflows/docs.yml +2 -2
  4. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/Dockerfile-ci +1 -1
  5. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/Dockerfile-docs +1 -1
  6. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/PKG-INFO +1 -1
  7. junifer-0.0.7.dev130/docs/changes/newsfragments/456.misc +1 -0
  8. junifer-0.0.7.dev130/docs/changes/newsfragments/457.misc +1 -0
  9. junifer-0.0.7.dev130/junifer/_version.py +21 -0
  10. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/data/utils.py +2 -2
  11. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer.egg-info/PKG-INFO +1 -1
  12. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer.egg-info/SOURCES.txt +2 -0
  13. junifer-0.0.7.dev123/junifer/_version.py +0 -34
  14. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/.dockerignore +0 -0
  15. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/.github/ISSUE_TEMPLATE/bug-report.yml +0 -0
  16. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/.github/ISSUE_TEMPLATE/config.yml +0 -0
  17. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/.github/ISSUE_TEMPLATE/dataset-request.yml +0 -0
  18. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/.github/ISSUE_TEMPLATE/documention-request.yml +0 -0
  19. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/.github/ISSUE_TEMPLATE/feature-request.yml +0 -0
  20. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/.github/ISSUE_TEMPLATE/marker-request.yml +0 -0
  21. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/.github/dependabot.yml +0 -0
  22. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/.github/pull_request_template.md +0 -0
  23. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/.github/workflows/ci-docs.yml +0 -0
  24. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/.github/workflows/docker-ci-publish.yml +0 -0
  25. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/.github/workflows/docker-docs-publish.yml +0 -0
  26. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/.github/workflows/lint.yml +0 -0
  27. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/.github/workflows/publish.yml +0 -0
  28. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/.gitignore +0 -0
  29. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/.gitmodules +0 -0
  30. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/.pre-commit-config.yaml +0 -0
  31. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/AUTHORS.rst +0 -0
  32. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/LICENSE.md +0 -0
  33. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/README.md +0 -0
  34. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/codecov.yml +0 -0
  35. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/conda-env.yml +0 -0
  36. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/Makefile +0 -0
  37. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/_static/css/custom.css +0 -0
  38. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/_static/js/custom.js +0 -0
  39. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/_templates/versions.html +0 -0
  40. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/api/api.rst +0 -0
  41. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/api/cli.rst +0 -0
  42. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/api/configs.rst +0 -0
  43. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/api/data.rst +0 -0
  44. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/api/datagrabbers.rst +0 -0
  45. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/api/datareaders.rst +0 -0
  46. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/api/index.rst +0 -0
  47. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/api/markers.rst +0 -0
  48. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/api/nilearn.rst +0 -0
  49. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/api/onthefly.rst +0 -0
  50. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/api/pipeline.rst +0 -0
  51. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/api/preprocessing.rst +0 -0
  52. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/api/stats.rst +0 -0
  53. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/api/storage.rst +0 -0
  54. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/api/testing.rst +0 -0
  55. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/api/utils.rst +0 -0
  56. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/builtin.rst +0 -0
  57. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/changes/contributors.inc +0 -0
  58. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/changes/newsfragments/.gitignore +0 -0
  59. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/changes/newsfragments/333.enh +0 -0
  60. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/changes/newsfragments/429.change +0 -0
  61. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/changes/newsfragments/429.enh +0 -0
  62. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/changes/newsfragments/432.feature +0 -0
  63. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/changes/newsfragments/441.misc +0 -0
  64. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/changes/newsfragments/443.feature +0 -0
  65. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/changes/newsfragments/444.bugfix +0 -0
  66. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/changes/newsfragments/450.doc +0 -0
  67. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/changes/newsfragments/450.feature +0 -0
  68. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/changes/newsfragments/451.doc +0 -0
  69. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/changes/newsfragments/451.feature +0 -0
  70. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/changes/newsfragments/452.doc +0 -0
  71. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/changes/newsfragments/452.feature +0 -0
  72. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/conf.py +0 -0
  73. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/contribution.rst +0 -0
  74. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/extending/coordinates.rst +0 -0
  75. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/extending/data_dump_asset.rst +0 -0
  76. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/extending/data_registries.rst +0 -0
  77. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/extending/data_types.rst +0 -0
  78. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/extending/datagrabber.rst +0 -0
  79. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/extending/dependencies.rst +0 -0
  80. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/extending/extension.rst +0 -0
  81. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/extending/index.rst +0 -0
  82. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/extending/marker.rst +0 -0
  83. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/extending/masks.rst +0 -0
  84. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/extending/parcellations.rst +0 -0
  85. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/extending/plugins.rst +0 -0
  86. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/extending/preprocessor.rst +0 -0
  87. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/faq.rst +0 -0
  88. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/help.rst +0 -0
  89. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/images/junifer_logo.png +0 -0
  90. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/index.rst +0 -0
  91. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/installation.rst +0 -0
  92. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/links.inc +0 -0
  93. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/maintaining.rst +0 -0
  94. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/redirect.html +0 -0
  95. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/starting.rst +0 -0
  96. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/understanding/data.rst +0 -0
  97. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/understanding/datagrabber.rst +0 -0
  98. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/understanding/datareader.rst +0 -0
  99. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/understanding/index.rst +0 -0
  100. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/understanding/marker.rst +0 -0
  101. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/understanding/pipeline.rst +0 -0
  102. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/understanding/preprocess.rst +0 -0
  103. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/understanding/storage.rst +0 -0
  104. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/using/codeless.rst +0 -0
  105. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/using/configuring.rst +0 -0
  106. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/using/dumping.rst +0 -0
  107. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/using/index.rst +0 -0
  108. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/using/masks.rst +0 -0
  109. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/using/queueing.rst +0 -0
  110. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/using/running.rst +0 -0
  111. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/docs/whats_new.rst +0 -0
  112. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/examples/README.rst +0 -0
  113. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/examples/norun_hcpfc_pearson.py +0 -0
  114. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/examples/norun_ukbvm_gmd.py +0 -0
  115. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/examples/run_compute_parcel_mean.py +0 -0
  116. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/examples/run_datagrabber_bids_datalad.py +0 -0
  117. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/examples/run_ets_rss_marker.py +0 -0
  118. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/examples/run_junifer_julearn.py +0 -0
  119. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/examples/run_run_gmd_mean.py +0 -0
  120. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/examples/yamls/gmd_mean.yaml +0 -0
  121. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/examples/yamls/gmd_mean_htcondor.yaml +0 -0
  122. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/examples/yamls/partly_cloudy_agg_mean_tian.yml +0 -0
  123. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/examples/yamls/ukb_gmd_mean.yaml +0 -0
  124. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/ignore_words.txt +0 -0
  125. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/__init__.py +0 -0
  126. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/__init__.pyi +0 -0
  127. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/api/__init__.py +0 -0
  128. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/api/__init__.pyi +0 -0
  129. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/api/decorators.py +0 -0
  130. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/api/functions.py +0 -0
  131. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/api/py.typed +0 -0
  132. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/api/queue_context/__init__.py +0 -0
  133. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/api/queue_context/__init__.pyi +0 -0
  134. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/api/queue_context/gnu_parallel_local_adapter.py +0 -0
  135. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/api/queue_context/htcondor_adapter.py +0 -0
  136. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/api/queue_context/py.typed +0 -0
  137. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/api/queue_context/queue_context_adapter.py +0 -0
  138. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/api/queue_context/tests/test_gnu_parallel_local_adapter.py +0 -0
  139. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/api/queue_context/tests/test_htcondor_adapter.py +0 -0
  140. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/api/res/afni/3dAFNItoNIFTI +0 -0
  141. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/api/res/afni/3dRSFC +0 -0
  142. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/api/res/afni/3dReHo +0 -0
  143. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/api/res/afni/afni +0 -0
  144. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/api/res/afni/run_afni_docker.sh +0 -0
  145. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/api/res/ants/ResampleImage +0 -0
  146. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/api/res/ants/antsApplyTransforms +0 -0
  147. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/api/res/ants/antsApplyTransformsToPoints +0 -0
  148. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/api/res/ants/run_ants_docker.sh +0 -0
  149. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/api/res/freesurfer/mri_binarize +0 -0
  150. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/api/res/freesurfer/mri_mc +0 -0
  151. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/api/res/freesurfer/mri_pretess +0 -0
  152. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/api/res/freesurfer/mris_convert +0 -0
  153. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/api/res/freesurfer/run_freesurfer_docker.sh +0 -0
  154. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/api/res/fsl/applywarp +0 -0
  155. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/api/res/fsl/flirt +0 -0
  156. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/api/res/fsl/img2imgcoord +0 -0
  157. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/api/res/fsl/run_fsl_docker.sh +0 -0
  158. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/api/res/fsl/std2imgcoord +0 -0
  159. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/api/res/run_conda.bash +0 -0
  160. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/api/res/run_conda.zsh +0 -0
  161. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/api/res/run_venv.bash +0 -0
  162. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/api/res/run_venv.zsh +0 -0
  163. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/api/tests/test_decorators.py +0 -0
  164. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/api/tests/test_functions.py +0 -0
  165. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/cli/__init__.py +0 -0
  166. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/cli/__init__.pyi +0 -0
  167. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/cli/cli.py +0 -0
  168. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/cli/parser.py +0 -0
  169. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/cli/py.typed +0 -0
  170. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/cli/tests/data/gmd_mean.yaml +0 -0
  171. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/cli/tests/data/gmd_mean_htcondor.yaml +0 -0
  172. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/cli/tests/data/partly_cloudy_agg_mean_tian.yml +0 -0
  173. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/cli/tests/test_cli.py +0 -0
  174. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/cli/tests/test_cli_utils.py +0 -0
  175. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/cli/tests/test_parser.py +0 -0
  176. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/cli/utils.py +0 -0
  177. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/configs/__init__.py +0 -0
  178. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/configs/juseless/__init__.py +0 -0
  179. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/configs/juseless/__init__.pyi +0 -0
  180. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/configs/juseless/datagrabbers/__init__.py +0 -0
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  343. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/markers/temporal_snr/__init__.pyi +0 -0
  344. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/markers/temporal_snr/py.typed +0 -0
  345. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/markers/temporal_snr/temporal_snr_base.py +0 -0
  346. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/markers/temporal_snr/temporal_snr_parcels.py +0 -0
  347. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/markers/temporal_snr/temporal_snr_spheres.py +0 -0
  348. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/markers/temporal_snr/tests/test_temporal_snr_base.py +0 -0
  349. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/markers/temporal_snr/tests/test_temporal_snr_parcels.py +0 -0
  350. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/markers/temporal_snr/tests/test_temporal_snr_spheres.py +0 -0
  351. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/markers/tests/test_brainprint.py +0 -0
  352. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/markers/tests/test_ets_rss.py +0 -0
  353. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/markers/tests/test_marker_utils.py +0 -0
  354. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/markers/tests/test_markers_base.py +0 -0
  355. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/markers/tests/test_parcel_aggregation.py +0 -0
  356. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/markers/tests/test_sphere_aggregation.py +0 -0
  357. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/markers/utils.py +0 -0
  358. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/onthefly/__init__.py +0 -0
  359. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/onthefly/_brainprint.py +0 -0
  360. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/onthefly/read_transform.py +0 -0
  361. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/onthefly/tests/test_read_transform.py +0 -0
  362. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/pipeline/__init__.py +0 -0
  363. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/pipeline/__init__.pyi +0 -0
  364. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/pipeline/_data_object_dumper.py +0 -0
  365. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/pipeline/marker_collection.py +0 -0
  366. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/pipeline/pipeline_component_registry.py +0 -0
  367. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/pipeline/pipeline_step_mixin.py +0 -0
  368. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/pipeline/py.typed +0 -0
  369. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/pipeline/tests/test_data_object_dumper.py +0 -0
  370. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/pipeline/tests/test_marker_collection.py +0 -0
  371. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/pipeline/tests/test_pipeline_component_registry.py +0 -0
  372. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/pipeline/tests/test_pipeline_step_mixin.py +0 -0
  373. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/pipeline/tests/test_update_meta_mixin.py +0 -0
  374. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/pipeline/tests/test_workdir_manager.py +0 -0
  375. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/pipeline/update_meta_mixin.py +0 -0
  376. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/pipeline/utils.py +0 -0
  377. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/pipeline/workdir_manager.py +0 -0
  378. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/preprocess/__init__.py +0 -0
  379. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/preprocess/__init__.pyi +0 -0
  380. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/preprocess/_temporal_filter.py +0 -0
  381. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/preprocess/_temporal_slicer.py +0 -0
  382. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/preprocess/base.py +0 -0
  383. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/preprocess/confounds/__init__.py +0 -0
  384. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/preprocess/confounds/__init__.pyi +0 -0
  385. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/preprocess/confounds/fmriprep_confound_remover.py +0 -0
  386. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/preprocess/confounds/py.typed +0 -0
  387. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/preprocess/confounds/tests/test_fmriprep_confound_remover.py +0 -0
  388. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/preprocess/py.typed +0 -0
  389. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/preprocess/smoothing/__init__.py +0 -0
  390. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/preprocess/smoothing/__init__.pyi +0 -0
  391. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/preprocess/smoothing/_afni_smoothing.py +0 -0
  392. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/preprocess/smoothing/_fsl_smoothing.py +0 -0
  393. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/preprocess/smoothing/_nilearn_smoothing.py +0 -0
  394. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/preprocess/smoothing/py.typed +0 -0
  395. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/preprocess/smoothing/smoothing.py +0 -0
  396. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/preprocess/smoothing/tests/test_smoothing.py +0 -0
  397. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/preprocess/tests/test_preprocess_base.py +0 -0
  398. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/preprocess/tests/test_temporal_filter.py +0 -0
  399. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/preprocess/tests/test_temporal_slicer.py +0 -0
  400. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/preprocess/warping/__init__.py +0 -0
  401. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/preprocess/warping/__init__.pyi +0 -0
  402. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/preprocess/warping/_ants_warper.py +0 -0
  403. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/preprocess/warping/_fsl_warper.py +0 -0
  404. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/preprocess/warping/py.typed +0 -0
  405. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/preprocess/warping/space_warper.py +0 -0
  406. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/preprocess/warping/tests/test_space_warper.py +0 -0
  407. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/py.typed +0 -0
  408. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/stats.py +0 -0
  409. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/storage/__init__.py +0 -0
  410. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/storage/__init__.pyi +0 -0
  411. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/storage/base.py +0 -0
  412. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/storage/hdf5.py +0 -0
  413. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/storage/pandas_base.py +0 -0
  414. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/storage/py.typed +0 -0
  415. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/storage/sqlite.py +0 -0
  416. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/storage/tests/test_hdf5.py +0 -0
  417. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/storage/tests/test_pandas_base.py +0 -0
  418. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/storage/tests/test_sqlite.py +0 -0
  419. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/storage/tests/test_storage_base.py +0 -0
  420. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/storage/tests/test_utils.py +0 -0
  421. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/storage/utils.py +0 -0
  422. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/testing/__init__.py +0 -0
  423. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/testing/__init__.pyi +0 -0
  424. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/testing/data/sub-0001_task-anticipation_acq-seq_desc-confounds_regressors.tsv +0 -0
  425. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/testing/datagrabbers.py +0 -0
  426. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/testing/py.typed +0 -0
  427. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/testing/registry.py +0 -0
  428. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/testing/tests/test_oasisvmbtesting_datagrabber.py +0 -0
  429. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/testing/tests/test_partlycloudytesting_datagrabber.py +0 -0
  430. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/testing/tests/test_spmauditory_datagrabber.py +0 -0
  431. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/testing/tests/test_testing_registry.py +0 -0
  432. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/testing/utils.py +0 -0
  433. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/tests/test_main.py +0 -0
  434. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/tests/test_stats.py +0 -0
  435. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/typing/__init__.py +0 -0
  436. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/typing/__init__.pyi +0 -0
  437. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/typing/_typing.py +0 -0
  438. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/utils/__init__.py +0 -0
  439. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/utils/__init__.pyi +0 -0
  440. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/utils/_config.py +0 -0
  441. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/utils/_yaml.py +0 -0
  442. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/utils/fs.py +0 -0
  443. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/utils/helpers.py +0 -0
  444. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/utils/logging.py +0 -0
  445. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/utils/py.typed +0 -0
  446. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/utils/singleton.py +0 -0
  447. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/utils/tests/test_config.py +0 -0
  448. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/utils/tests/test_fs.py +0 -0
  449. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/utils/tests/test_helpers.py +0 -0
  450. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/utils/tests/test_logging.py +0 -0
  451. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer.egg-info/dependency_links.txt +0 -0
  452. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer.egg-info/entry_points.txt +0 -0
  453. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer.egg-info/requires.txt +0 -0
  454. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer.egg-info/top_level.txt +0 -0
  455. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/pyproject.toml +0 -0
  456. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/setup.cfg +0 -0
  457. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/setup.py +0 -0
  458. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/tools/create_aomic1000_example_dataset.py +0 -0
  459. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/tools/create_aomicpiop1_example_dataset.py +0 -0
  460. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/tools/create_aomicpiop2_example_dataset.py +0 -0
  461. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/tools/create_bids_example_dataset.py +0 -0
  462. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/tools/create_bids_example_dataset_sessions.py +0 -0
  463. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/tools/create_dmcc13_benchmark_example_dataset.py +0 -0
  464. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/tools/create_hcp1200_example_dataset.py +0 -0
  465. {junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/tox.ini +0 -0
{junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/.github/workflows/ci.yml RENAMED
@@ -54,8 +54,8 @@ jobs:
54
54
  jq
55
55
  - name: Copy junifer-data directory
56
56
  run: |
57
- mkdir -p $HOME/junifer_data/v2
58
- cp -ar /root/junifer_data/v2/. $HOME/junifer_data/v2/
57
+ mkdir -p $HOME/junifer_data/v3
58
+ cp -ar /root/junifer_data/v3/. $HOME/junifer_data/v3/
59
59
  - name: Checkout repository
60
60
  uses: actions/checkout@v4
61
61
  with:
{junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/.github/workflows/docs-preview.yml RENAMED
@@ -40,8 +40,8 @@ jobs:
40
40
  jq
41
41
  - name: Copy junifer-data directory
42
42
  run: |
43
- mkdir -p $HOME/junifer_data/v2
44
- cp -ar /root/junifer_data/v2/. $HOME/junifer_data/v2/
43
+ mkdir -p $HOME/junifer_data/v3
44
+ cp -ar /root/junifer_data/v3/. $HOME/junifer_data/v3/
45
45
  - name: Checkout repository
46
46
  uses: actions/checkout@v4
47
47
  with:
{junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/.github/workflows/docs.yml RENAMED
@@ -31,8 +31,8 @@ jobs:
31
31
  jq
32
32
  - name: Copy junifer-data directory
33
33
  run: |
34
- mkdir -p $HOME/junifer_data/v2
35
- cp -ar /root/junifer_data/v2/. $HOME/junifer_data/v2/
34
+ mkdir -p $HOME/junifer_data/v3
35
+ cp -ar /root/junifer_data/v3/. $HOME/junifer_data/v3/
36
36
  - name: Checkout repository
37
37
  uses: actions/checkout@v4
38
38
  with:
{junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/Dockerfile-ci RENAMED
@@ -45,7 +45,7 @@ RUN apt-get update && \
45
45
  && rm -rf /var/lib/apt/lists/*
46
46
 
47
47
  # Add junifer-data
48
- COPY --from=ghcr.io/juaml/junifer-data:v2 /opt/junifer-data /root/junifer_data/v2
48
+ COPY --from=ghcr.io/juaml/junifer-data:v3 /opt/junifer-data /root/junifer_data/v3
49
49
 
50
50
  # Add ANTs
51
51
  COPY --from=antsx/ants:latest /opt/ants /opt/ants
{junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/Dockerfile-docs RENAMED
@@ -14,7 +14,7 @@ RUN apt-get update && \
14
14
  && rm -rf /var/lib/apt/lists/*
15
15
 
16
16
  # Add junifer-data
17
- COPY --from=ghcr.io/juaml/junifer-data:v2 /opt/junifer-data /root/junifer_data/v2
17
+ COPY --from=ghcr.io/juaml/junifer-data:v3 /opt/junifer-data /root/junifer_data/v3
18
18
 
19
19
  # Add ANTs
20
20
  COPY --from=antsx/ants:latest /opt/ants /opt/ants
{junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: junifer
3
- Version: 0.0.7.dev123
3
+ Version: 0.0.7.dev130
4
4
  Summary: JUelich NeuroImaging FEature extractoR
5
5
  Author-email: Fede Raimondo <f.raimondo@fz-juelich.de>, Synchon Mandal <s.mandal@fz-juelich.de>
6
6
  Maintainer-email: Fede Raimondo <f.raimondo@fz-juelich.de>, Synchon Mandal <s.mandal@fz-juelich.de>
junifer-0.0.7.dev130/docs/changes/newsfragments/456.misc ADDED
@@ -0,0 +1 @@
1
+ Bump ``junifer-data`` to ``v3`` for Docker images by `Synchon Mandal`_
junifer-0.0.7.dev130/docs/changes/newsfragments/457.misc ADDED
@@ -0,0 +1 @@
1
+ Bump ``junifer-data`` to ``v3`` by `Synchon Mandal`_
junifer-0.0.7.dev130/junifer/_version.py ADDED
@@ -0,0 +1,21 @@
1
+ # file generated by setuptools-scm
2
+ # don't change, don't track in version control
3
+
4
+ __all__ = ["__version__", "__version_tuple__", "version", "version_tuple"]
5
+
6
+ TYPE_CHECKING = False
7
+ if TYPE_CHECKING:
8
+ from typing import Tuple
9
+ from typing import Union
10
+
11
+ VERSION_TUPLE = Tuple[Union[int, str], ...]
12
+ else:
13
+ VERSION_TUPLE = object
14
+
15
+ version: str
16
+ __version__: str
17
+ __version_tuple__: VERSION_TUPLE
18
+ version_tuple: VERSION_TUPLE
19
+
20
+ __version__ = version = '0.0.7.dev130'
21
+ __version_tuple__ = version_tuple = (0, 0, 7, 'dev130')
{junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer/data/utils.py RENAMED
@@ -24,10 +24,10 @@ __all__ = [
24
24
 
25
25
 
26
26
  # junifer-data version constant
27
- JUNIFER_DATA_VERSION = "2"
27
+ JUNIFER_DATA_VERSION = "3"
28
28
 
29
29
  # junifer-data hexsha constant
30
- JUNIFER_DATA_HEXSHA = "015712689254c052fa64bca19f0f2da342e664ac"
30
+ JUNIFER_DATA_HEXSHA = "13665e45eaaaa8de259c50c47a2f6a0a095ec410"
31
31
 
32
32
  JUNIFER_DATA_PARAMS = {
33
33
  "tag": JUNIFER_DATA_VERSION,
{junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer.egg-info/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: junifer
3
- Version: 0.0.7.dev123
3
+ Version: 0.0.7.dev130
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  Summary: JUelich NeuroImaging FEature extractoR
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  Author-email: Fede Raimondo <f.raimondo@fz-juelich.de>, Synchon Mandal <s.mandal@fz-juelich.de>
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  Maintainer-email: Fede Raimondo <f.raimondo@fz-juelich.de>, Synchon Mandal <s.mandal@fz-juelich.de>
{junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/junifer.egg-info/SOURCES.txt RENAMED
@@ -76,6 +76,8 @@ docs/changes/newsfragments/451.doc
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  docs/changes/newsfragments/451.feature
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  docs/changes/newsfragments/452.doc
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  docs/changes/newsfragments/452.feature
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+ docs/changes/newsfragments/456.misc
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+ docs/changes/newsfragments/457.misc
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  docs/extending/coordinates.rst
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  docs/extending/data_dump_asset.rst
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  docs/extending/data_registries.rst
junifer-0.0.7.dev123/junifer/_version.py DELETED
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- # file generated by setuptools-scm
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- # don't change, don't track in version control
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-
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- __all__ = [
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- "__version__",
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- "__version_tuple__",
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- "version",
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- "version_tuple",
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- "__commit_id__",
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- "commit_id",
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- ]
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-
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- TYPE_CHECKING = False
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- if TYPE_CHECKING:
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- from typing import Tuple
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- from typing import Union
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-
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- VERSION_TUPLE = Tuple[Union[int, str], ...]
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- COMMIT_ID = Union[str, None]
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- else:
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- VERSION_TUPLE = object
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- COMMIT_ID = object
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-
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- version: str
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- __version__: str
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- __version_tuple__: VERSION_TUPLE
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- version_tuple: VERSION_TUPLE
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- commit_id: COMMIT_ID
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- __commit_id__: COMMIT_ID
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-
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- __version__ = version = '0.0.7.dev123'
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- __version_tuple__ = version_tuple = (0, 0, 7, 'dev123')
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-
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- __commit_id__ = commit_id = 'g77932fce8'
{junifer-0.0.7.dev123 → junifer-0.0.7.dev130}/README.md RENAMED
File without changes