junifer 0.0.5.dev242__tar.gz → 0.0.6.dev6__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (380) hide show
  1. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/PKG-INFO +1 -1
  2. junifer-0.0.6.dev6/docs/changes/newsfragments/356.bugfix +1 -0
  3. junifer-0.0.6.dev6/docs/changes/newsfragments/357.enh +1 -0
  4. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/_version.py +2 -2
  5. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/brainprint.py +1 -1
  6. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/utils/helpers.py +3 -2
  7. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer.egg-info/PKG-INFO +1 -1
  8. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer.egg-info/SOURCES.txt +2 -0
  9. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/.github/ISSUE_TEMPLATE/bug-report.yml +0 -0
  10. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/.github/ISSUE_TEMPLATE/config.yml +0 -0
  11. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/.github/ISSUE_TEMPLATE/dataset-request.yml +0 -0
  12. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/.github/ISSUE_TEMPLATE/documention-request.yml +0 -0
  13. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/.github/ISSUE_TEMPLATE/feature-request.yml +0 -0
  14. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/.github/ISSUE_TEMPLATE/marker-request.yml +0 -0
  15. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/.github/dependabot.yml +0 -0
  16. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/.github/pull_request_template.md +0 -0
  17. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/.github/workflows/ci-docs.yml +0 -0
  18. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/.github/workflows/ci.yml +0 -0
  19. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/.github/workflows/docs-preview.yml +0 -0
  20. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/.github/workflows/docs.yml +0 -0
  21. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/.github/workflows/lint.yml +0 -0
  22. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/.github/workflows/pypi.yml +0 -0
  23. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/.gitignore +0 -0
  24. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/.gitmodules +0 -0
  25. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/.pre-commit-config.yaml +0 -0
  26. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/AUTHORS.rst +0 -0
  27. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/LICENSE.md +0 -0
  28. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/README.md +0 -0
  29. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/codecov.yml +0 -0
  30. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/conda-env.yml +0 -0
  31. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/Makefile +0 -0
  32. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/_static/css/custom.css +0 -0
  33. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/_static/js/custom.js +0 -0
  34. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/_templates/versions.html +0 -0
  35. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/api/api.rst +0 -0
  36. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/api/configs.rst +0 -0
  37. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/api/data.rst +0 -0
  38. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/api/datagrabbers.rst +0 -0
  39. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/api/datareaders.rst +0 -0
  40. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/api/index.rst +0 -0
  41. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/api/markers.rst +0 -0
  42. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/api/nilearn.rst +0 -0
  43. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/api/onthefly.rst +0 -0
  44. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/api/pipeline.rst +0 -0
  45. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/api/preprocessing.rst +0 -0
  46. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/api/stats.rst +0 -0
  47. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/api/storage.rst +0 -0
  48. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/api/testing.rst +0 -0
  49. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/api/utils.rst +0 -0
  50. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/builtin.rst +0 -0
  51. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/changes/contributors.inc +0 -0
  52. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/changes/newsfragments/.gitignore +0 -0
  53. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/conf.py +0 -0
  54. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/contribution.rst +0 -0
  55. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/extending/coordinates.rst +0 -0
  56. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/extending/datagrabber.rst +0 -0
  57. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/extending/dependencies.rst +0 -0
  58. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/extending/extension.rst +0 -0
  59. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/extending/index.rst +0 -0
  60. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/extending/marker.rst +0 -0
  61. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/extending/masks.rst +0 -0
  62. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/extending/parcellations.rst +0 -0
  63. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/extending/preprocessor.rst +0 -0
  64. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/faq.rst +0 -0
  65. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/help.rst +0 -0
  66. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/images/junifer_logo.png +0 -0
  67. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/index.rst +0 -0
  68. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/installation.rst +0 -0
  69. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/links.inc +0 -0
  70. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/maintaining.rst +0 -0
  71. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/redirect.html +0 -0
  72. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/sphinxext/gh_substitutions.py +0 -0
  73. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/starting.rst +0 -0
  74. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/understanding/data.rst +0 -0
  75. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/understanding/datagrabber.rst +0 -0
  76. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/understanding/datareader.rst +0 -0
  77. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/understanding/index.rst +0 -0
  78. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/understanding/marker.rst +0 -0
  79. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/understanding/pipeline.rst +0 -0
  80. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/understanding/preprocess.rst +0 -0
  81. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/understanding/storage.rst +0 -0
  82. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/using/codeless.rst +0 -0
  83. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/using/index.rst +0 -0
  84. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/using/masks.rst +0 -0
  85. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/using/queueing.rst +0 -0
  86. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/using/running.rst +0 -0
  87. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/docs/whats_new.rst +0 -0
  88. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/examples/README.rst +0 -0
  89. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/examples/norun_hcpfc_pearson.py +0 -0
  90. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/examples/norun_ukbvm_gmd.py +0 -0
  91. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/examples/run_compute_parcel_mean.py +0 -0
  92. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/examples/run_datagrabber_bids_datalad.py +0 -0
  93. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/examples/run_ets_rss_marker.py +0 -0
  94. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/examples/run_junifer_julearn.py +0 -0
  95. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/examples/run_run_gmd_mean.py +0 -0
  96. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/examples/yamls/gmd_mean.yaml +0 -0
  97. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/examples/yamls/gmd_mean_htcondor.yaml +0 -0
  98. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/examples/yamls/partly_cloudy_agg_mean_tian.yml +0 -0
  99. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/examples/yamls/ukb_gmd_mean.yaml +0 -0
  100. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/ignore_words.txt +0 -0
  101. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/__init__.py +0 -0
  102. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/api/__init__.py +0 -0
  103. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/api/cli.py +0 -0
  104. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/api/decorators.py +0 -0
  105. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/api/functions.py +0 -0
  106. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/api/parser.py +0 -0
  107. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/api/queue_context/__init__.py +0 -0
  108. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/api/queue_context/gnu_parallel_local_adapter.py +0 -0
  109. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/api/queue_context/htcondor_adapter.py +0 -0
  110. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/api/queue_context/queue_context_adapter.py +0 -0
  111. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/api/queue_context/tests/test_gnu_parallel_local_adapter.py +0 -0
  112. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/api/queue_context/tests/test_htcondor_adapter.py +0 -0
  113. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/api/res/afni/3dAFNItoNIFTI +0 -0
  114. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/api/res/afni/3dRSFC +0 -0
  115. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/api/res/afni/3dReHo +0 -0
  116. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/api/res/afni/afni +0 -0
  117. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/api/res/afni/run_afni_docker.sh +0 -0
  118. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/api/res/ants/ResampleImage +0 -0
  119. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/api/res/ants/antsApplyTransforms +0 -0
  120. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/api/res/ants/antsApplyTransformsToPoints +0 -0
  121. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/api/res/ants/run_ants_docker.sh +0 -0
  122. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/api/res/freesurfer/mri_binarize +0 -0
  123. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/api/res/freesurfer/mri_mc +0 -0
  124. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/api/res/freesurfer/mri_pretess +0 -0
  125. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/api/res/freesurfer/mris_convert +0 -0
  126. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/api/res/freesurfer/run_freesurfer_docker.sh +0 -0
  127. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/api/res/fsl/applywarp +0 -0
  128. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/api/res/fsl/flirt +0 -0
  129. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/api/res/fsl/img2imgcoord +0 -0
  130. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/api/res/fsl/run_fsl_docker.sh +0 -0
  131. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/api/res/fsl/std2imgcoord +0 -0
  132. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/api/res/run_conda.bash +0 -0
  133. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/api/res/run_conda.zsh +0 -0
  134. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/api/res/run_venv.bash +0 -0
  135. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/api/res/run_venv.zsh +0 -0
  136. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/api/tests/data/gmd_mean.yaml +0 -0
  137. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/api/tests/data/gmd_mean_htcondor.yaml +0 -0
  138. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/api/tests/data/partly_cloudy_agg_mean_tian.yml +0 -0
  139. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/api/tests/test_api_utils.py +0 -0
  140. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/api/tests/test_cli.py +0 -0
  141. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/api/tests/test_functions.py +0 -0
  142. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/api/tests/test_parser.py +0 -0
  143. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/api/utils.py +0 -0
  144. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/configs/__init__.py +0 -0
  145. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/configs/juseless/__init__.py +0 -0
  146. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/configs/juseless/datagrabbers/__init__.py +0 -0
  147. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/configs/juseless/datagrabbers/aomic_id1000_vbm.py +0 -0
  148. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/configs/juseless/datagrabbers/camcan_vbm.py +0 -0
  149. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/configs/juseless/datagrabbers/ixi_vbm.py +0 -0
  150. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/configs/juseless/datagrabbers/tests/test_aomic_id1000_vbm.py +0 -0
  151. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/configs/juseless/datagrabbers/tests/test_camcan_vbm.py +0 -0
  152. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/configs/juseless/datagrabbers/tests/test_ixi_vbm.py +0 -0
  153. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/configs/juseless/datagrabbers/tests/test_ucla.py +0 -0
  154. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/configs/juseless/datagrabbers/tests/test_ukb_vbm.py +0 -0
  155. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/configs/juseless/datagrabbers/ucla.py +0 -0
  156. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/configs/juseless/datagrabbers/ukb_vbm.py +0 -0
  157. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/data/VOIs/meta/AutobiographicalMemory_VOIs.txt +0 -0
  158. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/data/VOIs/meta/CogAC_VOIs.txt +0 -0
  159. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/data/VOIs/meta/CogAR_VOIs.txt +0 -0
  160. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/data/VOIs/meta/DMNBuckner_VOIs.txt +0 -0
  161. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/data/VOIs/meta/Dosenbach2010_MNI_VOIs.txt +0 -0
  162. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/data/VOIs/meta/Empathy_VOIs.txt +0 -0
  163. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/data/VOIs/meta/Motor_VOIs.txt +0 -0
  164. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/data/VOIs/meta/MultiTask_VOIs.txt +0 -0
  165. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/data/VOIs/meta/PhysioStress_VOIs.txt +0 -0
  166. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/data/VOIs/meta/Power2011_MNI_VOIs.txt +0 -0
  167. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/data/VOIs/meta/Power2013_MNI_VOIs.tsv +0 -0
  168. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/data/VOIs/meta/Rew_VOIs.txt +0 -0
  169. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/data/VOIs/meta/Somatosensory_VOIs.txt +0 -0
  170. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/data/VOIs/meta/ToM_VOIs.txt +0 -0
  171. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/data/VOIs/meta/VigAtt_VOIs.txt +0 -0
  172. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/data/VOIs/meta/WM_VOIs.txt +0 -0
  173. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/data/VOIs/meta/eMDN_VOIs.txt +0 -0
  174. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/data/VOIs/meta/eSAD_VOIs.txt +0 -0
  175. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/data/VOIs/meta/extDMN_VOIs.txt +0 -0
  176. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/data/__init__.py +0 -0
  177. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/data/coordinates.py +0 -0
  178. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/data/masks/ukb/UKB_15K_GM_template.nii.gz +0 -0
  179. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/data/masks/vickery-patil/CAT12_IXI555_MNI152_TMP_GS_GMprob0.2_clean.nii.gz +0 -0
  180. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/data/masks/vickery-patil/CAT12_IXI555_MNI152_TMP_GS_GMprob0.2_clean_3mm.nii.gz +0 -0
  181. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/data/masks/vickery-patil/GMprob0.2_cortex_3mm_NA_rm.nii.gz +0 -0
  182. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/data/masks.py +0 -0
  183. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/data/parcellations.py +0 -0
  184. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/data/template_spaces.py +0 -0
  185. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/data/tests/test_coordinates.py +0 -0
  186. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/data/tests/test_data_utils.py +0 -0
  187. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/data/tests/test_masks.py +0 -0
  188. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/data/tests/test_parcellations.py +0 -0
  189. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/data/tests/test_template_spaces.py +0 -0
  190. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/data/utils.py +0 -0
  191. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/datagrabber/__init__.py +0 -0
  192. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/datagrabber/aomic/__init__.py +0 -0
  193. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/datagrabber/aomic/id1000.py +0 -0
  194. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/datagrabber/aomic/piop1.py +0 -0
  195. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/datagrabber/aomic/piop2.py +0 -0
  196. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/datagrabber/aomic/tests/test_id1000.py +0 -0
  197. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/datagrabber/aomic/tests/test_piop1.py +0 -0
  198. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/datagrabber/aomic/tests/test_piop2.py +0 -0
  199. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/datagrabber/base.py +0 -0
  200. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/datagrabber/datalad_base.py +0 -0
  201. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/datagrabber/dmcc13_benchmark.py +0 -0
  202. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/datagrabber/hcp1200/__init__.py +0 -0
  203. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/datagrabber/hcp1200/datalad_hcp1200.py +0 -0
  204. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/datagrabber/hcp1200/hcp1200.py +0 -0
  205. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/datagrabber/hcp1200/tests/test_hcp1200.py +0 -0
  206. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/datagrabber/multiple.py +0 -0
  207. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/datagrabber/pattern.py +0 -0
  208. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/datagrabber/pattern_datalad.py +0 -0
  209. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/datagrabber/pattern_validation_mixin.py +0 -0
  210. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/datagrabber/tests/test_base.py +0 -0
  211. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/datagrabber/tests/test_datalad_base.py +0 -0
  212. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/datagrabber/tests/test_dmcc13_benchmark.py +0 -0
  213. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/datagrabber/tests/test_multiple.py +0 -0
  214. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/datagrabber/tests/test_pattern.py +0 -0
  215. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/datagrabber/tests/test_pattern_datalad.py +0 -0
  216. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/datagrabber/tests/test_pattern_validation_mixin.py +0 -0
  217. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/datareader/__init__.py +0 -0
  218. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/datareader/default.py +0 -0
  219. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/datareader/tests/test_default_reader.py +0 -0
  220. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/external/BrainPrint/brainprint/__init__.py +0 -0
  221. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/external/BrainPrint/brainprint/_version.py +0 -0
  222. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/external/BrainPrint/brainprint/asymmetry.py +0 -0
  223. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/external/BrainPrint/brainprint/brainprint.py +0 -0
  224. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/external/BrainPrint/brainprint/surfaces.py +0 -0
  225. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/external/BrainPrint/brainprint/utils/__init__.py +0 -0
  226. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/external/BrainPrint/brainprint/utils/_config.py +0 -0
  227. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/external/BrainPrint/brainprint/utils/utils.py +0 -0
  228. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/external/__init__.py +0 -0
  229. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/external/h5io/h5io/__init__.py +0 -0
  230. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/external/h5io/h5io/_h5io.py +0 -0
  231. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/external/h5io/h5io/_version.py +0 -0
  232. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/external/h5io/h5io/chunked_array.py +0 -0
  233. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/external/h5io/h5io/chunked_list.py +0 -0
  234. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/external/nilearn/__init__.py +0 -0
  235. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/external/nilearn/junifer_connectivity_measure.py +0 -0
  236. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/external/nilearn/junifer_nifti_spheres_masker.py +0 -0
  237. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/external/nilearn/tests/test_junifer_connectivity_measure.py +0 -0
  238. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/external/nilearn/tests/test_junifer_nifti_spheres_masker.py +0 -0
  239. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/__init__.py +0 -0
  240. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/base.py +0 -0
  241. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/collection.py +0 -0
  242. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/complexity/__init__.py +0 -0
  243. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/complexity/complexity_base.py +0 -0
  244. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/complexity/hurst_exponent.py +0 -0
  245. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/complexity/multiscale_entropy_auc.py +0 -0
  246. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/complexity/perm_entropy.py +0 -0
  247. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/complexity/range_entropy.py +0 -0
  248. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/complexity/range_entropy_auc.py +0 -0
  249. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/complexity/sample_entropy.py +0 -0
  250. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/complexity/tests/test_complexity_base.py +0 -0
  251. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/complexity/tests/test_hurst_exponent.py +0 -0
  252. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/complexity/tests/test_multiscale_entropy_auc.py +0 -0
  253. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/complexity/tests/test_perm_entropy.py +0 -0
  254. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/complexity/tests/test_range_entropy.py +0 -0
  255. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/complexity/tests/test_range_entropy_auc.py +0 -0
  256. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/complexity/tests/test_sample_entropy.py +0 -0
  257. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/complexity/tests/test_weighted_perm_entropy.py +0 -0
  258. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/complexity/weighted_perm_entropy.py +0 -0
  259. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/ets_rss.py +0 -0
  260. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/falff/__init__.py +0 -0
  261. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/falff/_afni_falff.py +0 -0
  262. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/falff/_junifer_falff.py +0 -0
  263. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/falff/falff_base.py +0 -0
  264. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/falff/falff_parcels.py +0 -0
  265. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/falff/falff_spheres.py +0 -0
  266. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/falff/tests/test_falff_parcels.py +0 -0
  267. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/falff/tests/test_falff_spheres.py +0 -0
  268. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/functional_connectivity/__init__.py +0 -0
  269. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/functional_connectivity/crossparcellation_functional_connectivity.py +0 -0
  270. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/functional_connectivity/edge_functional_connectivity_parcels.py +0 -0
  271. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/functional_connectivity/edge_functional_connectivity_spheres.py +0 -0
  272. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/functional_connectivity/functional_connectivity_base.py +0 -0
  273. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/functional_connectivity/functional_connectivity_parcels.py +0 -0
  274. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/functional_connectivity/functional_connectivity_spheres.py +0 -0
  275. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/functional_connectivity/tests/test_crossparcellation_functional_connectivity.py +0 -0
  276. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/functional_connectivity/tests/test_edge_functional_connectivity_parcels.py +0 -0
  277. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/functional_connectivity/tests/test_edge_functional_connectivity_spheres.py +0 -0
  278. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/functional_connectivity/tests/test_functional_connectivity_base.py +0 -0
  279. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/functional_connectivity/tests/test_functional_connectivity_parcels.py +0 -0
  280. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/functional_connectivity/tests/test_functional_connectivity_spheres.py +0 -0
  281. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/parcel_aggregation.py +0 -0
  282. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/reho/__init__.py +0 -0
  283. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/reho/_afni_reho.py +0 -0
  284. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/reho/_junifer_reho.py +0 -0
  285. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/reho/reho_base.py +0 -0
  286. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/reho/reho_parcels.py +0 -0
  287. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/reho/reho_spheres.py +0 -0
  288. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/reho/tests/test_reho_parcels.py +0 -0
  289. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/reho/tests/test_reho_spheres.py +0 -0
  290. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/sphere_aggregation.py +0 -0
  291. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/temporal_snr/__init__.py +0 -0
  292. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/temporal_snr/temporal_snr_base.py +0 -0
  293. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/temporal_snr/temporal_snr_parcels.py +0 -0
  294. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/temporal_snr/temporal_snr_spheres.py +0 -0
  295. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/temporal_snr/tests/test_temporal_snr_base.py +0 -0
  296. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/temporal_snr/tests/test_temporal_snr_parcels.py +0 -0
  297. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/temporal_snr/tests/test_temporal_snr_spheres.py +0 -0
  298. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/tests/test_brainprint.py +0 -0
  299. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/tests/test_collection.py +0 -0
  300. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/tests/test_ets_rss.py +0 -0
  301. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/tests/test_marker_utils.py +0 -0
  302. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/tests/test_markers_base.py +0 -0
  303. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/tests/test_parcel_aggregation.py +0 -0
  304. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/tests/test_sphere_aggregation.py +0 -0
  305. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/utils.py +0 -0
  306. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/onthefly/__init__.py +0 -0
  307. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/onthefly/read_transform.py +0 -0
  308. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/onthefly/tests/test_read_transform.py +0 -0
  309. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/pipeline/__init__.py +0 -0
  310. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/pipeline/pipeline_step_mixin.py +0 -0
  311. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/pipeline/registry.py +0 -0
  312. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/pipeline/singleton.py +0 -0
  313. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/pipeline/tests/test_pipeline_step_mixin.py +0 -0
  314. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/pipeline/tests/test_registry.py +0 -0
  315. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/pipeline/tests/test_update_meta_mixin.py +0 -0
  316. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/pipeline/tests/test_workdir_manager.py +0 -0
  317. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/pipeline/update_meta_mixin.py +0 -0
  318. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/pipeline/utils.py +0 -0
  319. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/pipeline/workdir_manager.py +0 -0
  320. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/preprocess/__init__.py +0 -0
  321. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/preprocess/base.py +0 -0
  322. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/preprocess/confounds/__init__.py +0 -0
  323. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/preprocess/confounds/fmriprep_confound_remover.py +0 -0
  324. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/preprocess/confounds/tests/test_fmriprep_confound_remover.py +0 -0
  325. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/preprocess/smoothing/__init__.py +0 -0
  326. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/preprocess/smoothing/_afni_smoothing.py +0 -0
  327. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/preprocess/smoothing/_fsl_smoothing.py +0 -0
  328. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/preprocess/smoothing/_nilearn_smoothing.py +0 -0
  329. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/preprocess/smoothing/smoothing.py +0 -0
  330. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/preprocess/smoothing/tests/test_smoothing.py +0 -0
  331. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/preprocess/tests/test_preprocess_base.py +0 -0
  332. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/preprocess/warping/__init__.py +0 -0
  333. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/preprocess/warping/_ants_warper.py +0 -0
  334. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/preprocess/warping/_fsl_warper.py +0 -0
  335. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/preprocess/warping/space_warper.py +0 -0
  336. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/preprocess/warping/tests/test_space_warper.py +0 -0
  337. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/stats.py +0 -0
  338. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/storage/__init__.py +0 -0
  339. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/storage/base.py +0 -0
  340. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/storage/hdf5.py +0 -0
  341. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/storage/pandas_base.py +0 -0
  342. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/storage/sqlite.py +0 -0
  343. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/storage/tests/test_hdf5.py +0 -0
  344. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/storage/tests/test_pandas_base.py +0 -0
  345. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/storage/tests/test_sqlite.py +0 -0
  346. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/storage/tests/test_storage_base.py +0 -0
  347. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/storage/tests/test_utils.py +0 -0
  348. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/storage/utils.py +0 -0
  349. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/testing/__init__.py +0 -0
  350. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/testing/data/sub-0001_task-anticipation_acq-seq_desc-confounds_regressors.tsv +0 -0
  351. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/testing/datagrabbers.py +0 -0
  352. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/testing/registry.py +0 -0
  353. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/testing/tests/test_oasisvmbtesting_datagrabber.py +0 -0
  354. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/testing/tests/test_partlycloudytesting_datagrabber.py +0 -0
  355. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/testing/tests/test_spmauditory_datagrabber.py +0 -0
  356. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/testing/tests/test_testing_registry.py +0 -0
  357. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/testing/utils.py +0 -0
  358. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/tests/test_main.py +0 -0
  359. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/tests/test_stats.py +0 -0
  360. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/utils/__init__.py +0 -0
  361. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/utils/fs.py +0 -0
  362. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/utils/logging.py +0 -0
  363. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/utils/tests/test_fs.py +0 -0
  364. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/utils/tests/test_helpers.py +0 -0
  365. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/utils/tests/test_logging.py +0 -0
  366. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer.egg-info/dependency_links.txt +0 -0
  367. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer.egg-info/entry_points.txt +0 -0
  368. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer.egg-info/requires.txt +0 -0
  369. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer.egg-info/top_level.txt +0 -0
  370. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/pyproject.toml +0 -0
  371. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/setup.cfg +0 -0
  372. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/setup.py +0 -0
  373. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/tools/create_aomic1000_example_dataset.py +0 -0
  374. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/tools/create_aomicpiop1_example_dataset.py +0 -0
  375. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/tools/create_aomicpiop2_example_dataset.py +0 -0
  376. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/tools/create_bids_example_dataset.py +0 -0
  377. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/tools/create_bids_example_dataset_sessions.py +0 -0
  378. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/tools/create_dmcc13_benchmark_example_dataset.py +0 -0
  379. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/tools/create_hcp1200_example_dataset.py +0 -0
  380. {junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/tox.ini +0 -0
{junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: junifer
3
- Version: 0.0.5.dev242
3
+ Version: 0.0.6.dev6
4
4
  Summary: JUelich NeuroImaging FEature extractoR
5
5
  Author-email: Fede Raimondo <f.raimondo@fz-juelich.de>, Synchon Mandal <s.mandal@fz-juelich.de>
6
6
  Maintainer-email: Fede Raimondo <f.raimondo@fz-juelich.de>, Synchon Mandal <s.mandal@fz-juelich.de>
junifer-0.0.6.dev6/docs/changes/newsfragments/356.bugfix ADDED
@@ -0,0 +1 @@
1
+ Fix ``mri_binarize`` command preparation for structures with multiple indices in :class:`.BrainPrint` by `Fede Raimondo`_
junifer-0.0.6.dev6/docs/changes/newsfragments/357.enh ADDED
@@ -0,0 +1 @@
1
+ Set proper stdout encoding for :func:`.run_ext_cmd` to ease human readability by `Fede Raimondo`_
{junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/_version.py RENAMED
@@ -12,5 +12,5 @@ __version__: str
12
12
  __version_tuple__: VERSION_TUPLE
13
13
  version_tuple: VERSION_TUPLE
14
14
 
15
- __version__ = version = '0.0.5.dev242'
16
- __version_tuple__ = version_tuple = (0, 0, 5, 'dev242')
15
+ __version__ = version = '0.0.6.dev6'
16
+ __version_tuple__ = version_tuple = (0, 0, 6, 'dev6')
{junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/markers/brainprint.py RENAMED
@@ -143,7 +143,7 @@ class BrainPrint(BaseMarker):
143
143
  mri_binarize_cmd = [
144
144
  "mri_binarize",
145
145
  f"--i {aseg_path.resolve()}",
146
- f"--match {''.join(indices)}",
146
+ f"--match {' '.join(indices)}",
147
147
  f"--o {mri_binarize_output_path.resolve()}",
148
148
  ]
149
149
  # Call mri_binarize command
{junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer/utils/helpers.py RENAMED
@@ -5,6 +5,7 @@
5
5
 
6
6
  import collections.abc
7
7
  import subprocess
8
+ import sys
8
9
  from typing import Dict, List
9
10
 
10
11
  from .logging import logger, raise_error
@@ -45,13 +46,13 @@ def run_ext_cmd(name: str, cmd: List[str]) -> None:
45
46
  if process.returncode == 0:
46
47
  logger.info(
47
48
  f"{name} command succeeded with the following output:\n"
48
- f"{process.stdout}"
49
+ f"{process.stdout.decode(sys.stdout.encoding)}"
49
50
  )
50
51
  else:
51
52
  raise_error(
52
53
  msg=(
53
54
  f"{name} command failed with the following error:\n"
54
- f"{process.stdout}"
55
+ f"{process.stdout.decode(sys.stdout.encoding)}"
55
56
  ),
56
57
  klass=RuntimeError,
57
58
  )
{junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer.egg-info/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: junifer
3
- Version: 0.0.5.dev242
3
+ Version: 0.0.6.dev6
4
4
  Summary: JUelich NeuroImaging FEature extractoR
5
5
  Author-email: Fede Raimondo <f.raimondo@fz-juelich.de>, Synchon Mandal <s.mandal@fz-juelich.de>
6
6
  Maintainer-email: Fede Raimondo <f.raimondo@fz-juelich.de>, Synchon Mandal <s.mandal@fz-juelich.de>
{junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/junifer.egg-info/SOURCES.txt RENAMED
@@ -57,6 +57,8 @@ docs/api/testing.rst
57
57
  docs/api/utils.rst
58
58
  docs/changes/contributors.inc
59
59
  docs/changes/newsfragments/.gitignore
60
+ docs/changes/newsfragments/356.bugfix
61
+ docs/changes/newsfragments/357.enh
60
62
  docs/extending/coordinates.rst
61
63
  docs/extending/datagrabber.rst
62
64
  docs/extending/dependencies.rst
{junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/.gitignore RENAMED
File without changes
{junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/.gitmodules RENAMED
File without changes
{junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/AUTHORS.rst RENAMED
File without changes
{junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/LICENSE.md RENAMED
File without changes
{junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/README.md RENAMED
File without changes
{junifer-0.0.5.dev242 → junifer-0.0.6.dev6}/codecov.yml RENAMED
File without changes