junifer 0.0.4.dev16__tar.gz → 0.0.4.dev22__tar.gz

{junifer-0.0.4.dev16 → junifer-0.0.4.dev22}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: junifer
-Version: 0.0.4.dev16
+Version: 0.0.4.dev22
 Summary: JUelich NeuroImaging FEature extractoR
 Author-email: Fede Raimondo <f.raimondo@fz-juelich.de>, Synchon Mandal <s.mandal@fz-juelich.de>
 Maintainer-email: Fede Raimondo <f.raimondo@fz-juelich.de>, Synchon Mandal <s.mandal@fz-juelich.de>

{junifer-0.0.4.dev16 → junifer-0.0.4.dev22}/docs/builtin.rst

@@ -527,7 +527,7 @@ Available
        | NeuroImage, Volume 60, Pages 830-846 (2012).
        | https://doi.org/10.1016/j.neuroimage.2011.11.050.
    * - Areal functional network from Power et al. (2011)
-     - ``Power``
+     - ``Power2011``
      - 0.0.2
      - | Power, J. D., Cohen, A. L., Nelson, S. M. et al.
        | Functional network organization of the human brain.
@@ -540,6 +540,14 @@ Available
        | Prediction of Individual Brain Maturity Using fMRI
        | Science, Volume 329(5997), Pages 1358-1361 (2010).
        | https://doi.org/10.1126/science.1194144
+   * - Areal functional network from Power et al. (2013)
+     - ``Power2013``
+     - 0.0.4
+     - | Power, J. D., Schlaggar, B. L., Lessov-Schlaggar, C. N., &
+       | Petersen, S. E.
+       | Evidence for hubs in human functional brain networks.
+       | Neuron, Volume 79(4), Pages 798–813 (2013).
+       | https://doi.org/10.1016/j.neuron.2013.07.035
 
 
 Planned

junifer-0.0.4.dev22/docs/changes/newsfragments/245.change

@@ -0,0 +1 @@
+Rename ``Power`` coordinates to ``Power2011`` by `Synchon Mandal`_

junifer-0.0.4.dev22/docs/changes/newsfragments/245.feature

@@ -0,0 +1 @@
+Add support for ``Power2013`` coordinates by `Synchon Mandal`_

{junifer-0.0.4.dev16 → junifer-0.0.4.dev22}/junifer/_version.py

@@ -12,5 +12,5 @@ __version__: str
 __version_tuple__: VERSION_TUPLE
 version_tuple: VERSION_TUPLE
 
-__version__ = version = '0.0.4.dev16'
-__version_tuple__ = version_tuple = (0, 0, 4, 'dev16')
+__version__ = version = '0.0.4.dev22'
+__version_tuple__ = version_tuple = (0, 0, 4, 'dev22')

junifer-0.0.4.dev22/junifer/data/VOIs/meta/Power2013_MNI_VOIs.tsv

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{junifer-0.0.4.dev16 → junifer-0.0.4.dev22}/junifer/data/coordinates.py

@@ -11,7 +11,7 @@ import numpy as np
 import pandas as pd
 from numpy.typing import ArrayLike
 
-from ..utils.logging import logger, raise_error
+from ..utils.logging import logger, raise_error, warn_with_log
 
 
 # Path to the VOIs
@@ -45,7 +45,9 @@ _available_coordinates: Dict[
     "VigAtt": _vois_meta_path / "VigAtt_VOIs.txt",
     "WM": _vois_meta_path / "WM_VOIs.txt",
     "Power": _vois_meta_path / "Power2011_MNI_VOIs.txt",
+    "Power2011": _vois_meta_path / "Power2011_MNI_VOIs.txt",
     "Dosenbach": _vois_meta_path / "Dosenbach2010_MNI_VOIs.txt",
+    "Power2013": _vois_meta_path / "Power2013_MNI_VOIs.tsv",
 }
 
 
@@ -134,9 +136,27 @@ def load_coordinates(name: str) -> Tuple[ArrayLike, List[str]]:
         The coordinates.
     list of str
         The names of the VOIs.
+
+    Warns
+    -----
+    DeprecationWarning
+        If ``Power`` is provided as the ``name``.
+
     """
     if name not in _available_coordinates:
         raise_error(f"Coordinates {name} not found.")
+
+    # Put up deprecation notice
+    if name == "Power":
+        warn_with_log(
+            msg=(
+                "`Power` has been replaced with `Power2011` and will be "
+                "removed in the next release. For now, it's available for "
+                "backward compatibility."
+            ),
+            category=DeprecationWarning,
+        )
+
     t_coord = _available_coordinates[name]
     if isinstance(t_coord, Path):
         df_coords = pd.read_csv(t_coord, sep="\t", header=None)

{junifer-0.0.4.dev16 → junifer-0.0.4.dev22}/junifer.egg-info/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: junifer
-Version: 0.0.4.dev16
+Version: 0.0.4.dev22
 Summary: JUelich NeuroImaging FEature extractoR
 Author-email: Fede Raimondo <f.raimondo@fz-juelich.de>, Synchon Mandal <s.mandal@fz-juelich.de>
 Maintainer-email: Fede Raimondo <f.raimondo@fz-juelich.de>, Synchon Mandal <s.mandal@fz-juelich.de>

{junifer-0.0.4.dev16 → junifer-0.0.4.dev22}/junifer.egg-info/SOURCES.txt

@@ -57,6 +57,8 @@ docs/api/utils.rst
 docs/changes/contributors.inc
 docs/changes/newsfragments/.gitignore
 docs/changes/newsfragments/233.bugfix
+docs/changes/newsfragments/245.change
+docs/changes/newsfragments/245.feature
 docs/changes/newsfragments/247.doc
 docs/changes/newsfragments/248.change
 docs/changes/newsfragments/253.misc
@@ -147,6 +149,7 @@ junifer/data/VOIs/meta/Motor_VOIs.txt
 junifer/data/VOIs/meta/MultiTask_VOIs.txt
 junifer/data/VOIs/meta/PhysioStress_VOIs.txt
 junifer/data/VOIs/meta/Power2011_MNI_VOIs.txt
+junifer/data/VOIs/meta/Power2013_MNI_VOIs.tsv
 junifer/data/VOIs/meta/Rew_VOIs.txt
 junifer/data/VOIs/meta/Somatosensory_VOIs.txt
 junifer/data/VOIs/meta/ToM_VOIs.txt