julearn 0.3.1.dev111__tar.gz → 0.3.1.dev112__tar.gz

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  1. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/PKG-INFO +1 -1
  2. julearn-0.3.1.dev112/docs/changes/newsfragments/245.bugfix +1 -0
  3. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/julearn/_version.py +2 -2
  4. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/julearn/stats/corrected_ttest.py +5 -1
  5. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/julearn.egg-info/PKG-INFO +1 -1
  6. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/julearn.egg-info/SOURCES.txt +1 -0
  7. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/.github/ISSUE_TEMPLATE/bug_report.yaml +0 -0
  8. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/.github/ISSUE_TEMPLATE/config.yml +0 -0
  9. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/.github/ISSUE_TEMPLATE/documentation_request.yaml +0 -0
  10. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/.github/ISSUE_TEMPLATE/feature_request.yaml +0 -0
  11. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/.github/workflows/ci-docs.yml +0 -0
  12. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/.github/workflows/ci.yml +0 -0
  13. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/.github/workflows/docs-preview.yml +0 -0
  14. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/.github/workflows/docs.yml +0 -0
  15. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/.github/workflows/lint.yml +0 -0
  16. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/.github/workflows/pypi.yml +0 -0
  17. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/.gitignore +0 -0
  18. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/.pre-commit-config.yaml +0 -0
  19. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/AUTHORS.rst +0 -0
  20. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/LICENSE.md +0 -0
  21. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/README.md +0 -0
  22. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/codecov.yml +0 -0
  23. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/Makefile +0 -0
  24. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/_static/css/custom.css +0 -0
  25. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/_static/js/custom.js +0 -0
  26. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/_templates/class.rst +0 -0
  27. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/_templates/function.rst +0 -0
  28. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/_templates/function_warning.rst +0 -0
  29. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/_templates/versions.html +0 -0
  30. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/api/base.rst +0 -0
  31. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/api/index.rst +0 -0
  32. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/api/inspect.rst +0 -0
  33. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/api/main.rst +0 -0
  34. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/api/model_selection.rst +0 -0
  35. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/api/models.rst +0 -0
  36. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/api/pipeline.rst +0 -0
  37. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/api/prepare.rst +0 -0
  38. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/api/scoring.rst +0 -0
  39. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/api/stats.rst +0 -0
  40. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/api/transformers.rst +0 -0
  41. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/api/utils.rst +0 -0
  42. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/api/viz.rst +0 -0
  43. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/available_pipeline_steps.rst +0 -0
  44. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/changes/contributors.inc +0 -0
  45. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/changes/newsfragments/.gitignore +0 -0
  46. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/changes/newsfragments/151.bugfix +0 -0
  47. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/changes/newsfragments/168.doc +0 -0
  48. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/changes/newsfragments/170.enh +0 -0
  49. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/changes/newsfragments/231.misc +0 -0
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  53. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/changes/newsfragments/235.doc +0 -0
  54. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/changes/newsfragments/236.bugfix +0 -0
  55. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/changes/newsfragments/47.feature +0 -0
  56. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/conf.py +0 -0
  57. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/configuration.rst +0 -0
  58. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/contributing.rst +0 -0
  59. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/examples.rst +0 -0
  60. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/faq.rst +0 -0
  61. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/getting_started.rst +0 -0
  62. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/images/corrected_ttest.png +0 -0
  63. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/images/final_estimator.png +0 -0
  64. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/images/iris_X.png +0 -0
  65. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/images/iris_df.png +0 -0
  66. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/images/iris_y.png +0 -0
  67. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/images/julearn_logo.png +0 -0
  68. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/images/julearn_logo_calm.png +0 -0
  69. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/images/julearn_logo_confbias.png +0 -0
  70. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/images/julearn_logo_cv.png +0 -0
  71. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/images/julearn_logo_generalization.png +0 -0
  72. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/images/julearn_logo_it.png +0 -0
  73. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/images/julearn_logo_ml.png +0 -0
  74. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/images/julearn_logo_mlit.png +0 -0
  75. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/images/multiple_scorers_run_cv.png +0 -0
  76. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/images/plot_scores.png +0 -0
  77. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/images/scores_run_cv.png +0 -0
  78. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/images/scores_run_cv_splitter.png +0 -0
  79. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/images/scores_run_cv_train.png +0 -0
  80. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/index.rst +0 -0
  81. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/links.inc +0 -0
  82. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/maintaining.rst +0 -0
  83. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/redirect.html +0 -0
  84. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/selected_deeper_topics/CBPM.rst +0 -0
  85. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/selected_deeper_topics/confound_removal.rst +0 -0
  86. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/selected_deeper_topics/cross_validation_splitter.rst +0 -0
  87. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/selected_deeper_topics/hyperparameter_tuning.rst +0 -0
  88. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/selected_deeper_topics/index.rst +0 -0
  89. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/selected_deeper_topics/model_inspect.rst +0 -0
  90. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/selected_deeper_topics/stacked_models.rst +0 -0
  91. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/selected_deeper_topics/target_transformers.rst +0 -0
  92. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/sphinxext/gh_substitutions.py +0 -0
  93. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/what_really_need_know/cross_validation.rst +0 -0
  94. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/what_really_need_know/data.rst +0 -0
  95. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/what_really_need_know/index.rst +0 -0
  96. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/what_really_need_know/model_comparison.rst +0 -0
  97. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/what_really_need_know/model_evaluation.rst +0 -0
  98. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/what_really_need_know/pipeline.rst +0 -0
  99. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/docs/whats_new.rst +0 -0
  100. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/examples/00_starting/README.rst +0 -0
  101. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/examples/00_starting/plot_cm_acc_multiclass.py +0 -0
  102. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/examples/00_starting/plot_example_regression.py +0 -0
  103. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/examples/00_starting/plot_stratified_kfold_reg.py +0 -0
  104. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/examples/00_starting/run_combine_pandas.py +0 -0
  105. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/examples/00_starting/run_grouped_cv.py +0 -0
  106. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/examples/00_starting/run_simple_binary_classification.py +0 -0
  107. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/examples/01_model_comparison/README.rst +0 -0
  108. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/examples/01_model_comparison/plot_simple_model_comparison.py +0 -0
  109. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/examples/02_inspection/README.rst +0 -0
  110. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/examples/02_inspection/plot_groupcv_inspect_svm.py +0 -0
  111. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/examples/02_inspection/plot_inspect_random_forest.py +0 -0
  112. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/examples/02_inspection/plot_preprocess.py +0 -0
  113. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/examples/02_inspection/run_binary_inspect_folds.py +0 -0
  114. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/examples/03_complex_models/README.rst +0 -0
  115. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/examples/03_complex_models/run_apply_to_target.py +0 -0
  116. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/examples/03_complex_models/run_example_pca_featsets.py +0 -0
  117. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/examples/03_complex_models/run_hyperparameter_multiple_grids.py +0 -0
  118. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/examples/03_complex_models/run_hyperparameter_tuning.py +0 -0
  119. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/examples/03_complex_models/run_stacked_models.py +0 -0
  120. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/examples/04_confounds/README.rst +0 -0
  121. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/examples/04_confounds/plot_confound_removal_classification.py +0 -0
  122. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/examples/04_confounds/run_return_confounds.py +0 -0
  123. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/examples/05_customization/README.rst +0 -0
  124. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/examples/05_customization/run_custom_scorers_regression.py +0 -0
  125. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/examples/99_docs/README.rst +0 -0
  126. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/examples/99_docs/run_cbpm_docs.py +0 -0
  127. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/examples/99_docs/run_confound_removal_docs.py +0 -0
  128. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/examples/99_docs/run_cv_splitters_docs.py +0 -0
  129. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/examples/99_docs/run_data_docs.py +0 -0
  130. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/examples/99_docs/run_hyperparameters_docs.py +0 -0
  131. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/examples/99_docs/run_model_comparison_docs.py +0 -0
  132. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/examples/99_docs/run_model_evaluation_docs.py +0 -0
  133. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/examples/99_docs/run_model_inspection_docs.py +0 -0
  134. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/examples/99_docs/run_pipeline_docs.py +0 -0
  135. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/examples/99_docs/run_stacked_models_docs.py +0 -0
  136. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/examples/99_docs/run_target_transformer_docs.py +0 -0
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  155. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/julearn/inspect/tests/test_cv.py +0 -0
  156. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/julearn/inspect/tests/test_inspector.py +0 -0
  157. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/julearn/inspect/tests/test_pipeline.py +0 -0
  158. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/julearn/inspect/tests/test_preprocess.py +0 -0
  159. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/julearn/model_selection/__init__.py +0 -0
  160. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/julearn/model_selection/available_searchers.py +0 -0
  161. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/julearn/model_selection/continuous_stratified_kfold.py +0 -0
  162. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/julearn/model_selection/stratified_bootstrap.py +0 -0
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  166. {julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/julearn/models/__init__.py +0 -0
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{julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: julearn
3
- Version: 0.3.1.dev111
3
+ Version: 0.3.1.dev112
4
4
  Summary: Juelich Machine Learning Library
5
5
  Author-email: Fede Raimondo <f.raimondo@fz-juelich.de>, Sami Hamdan <s.hamdan@fz-juelich.de>
6
6
  Maintainer-email: Sami Hamdan <s.hamdan@fz-juelich.de>
julearn-0.3.1.dev112/docs/changes/newsfragments/245.bugfix ADDED
@@ -0,0 +1 @@
1
+ Fix `alternative` parameter not being used in the corrected t-test `Fede Raimondo`_
{julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/julearn/_version.py RENAMED
@@ -12,5 +12,5 @@ __version__: str
12
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  __version_tuple__: VERSION_TUPLE
13
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  version_tuple: VERSION_TUPLE
14
14
 
15
- __version__ = version = '0.3.1.dev111'
16
- __version_tuple__ = version_tuple = (0, 3, 1, 'dev111')
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+ __version__ = version = '0.3.1.dev112'
16
+ __version_tuple__ = version_tuple = (0, 3, 1, 'dev112')
{julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/julearn/stats/corrected_ttest.py RENAMED
@@ -195,7 +195,11 @@ def corrected_ttest(
195
195
  df2 = k_scores[to_keep]
196
196
  differences = df1 - df2
197
197
  t_stat, p_val = _compute_corrected_ttest(
198
- differences, n_train=n_train, n_test=n_test, df=df
198
+ differences,
199
+ n_train=n_train,
200
+ n_test=n_test,
201
+ df=df,
202
+ alternative=alternative,
199
203
  )
200
204
  stat_df = t_stat.to_frame("t-stat")
201
205
  stat_df["p-val"] = p_val
{julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/julearn.egg-info/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: julearn
3
- Version: 0.3.1.dev111
3
+ Version: 0.3.1.dev112
4
4
  Summary: Juelich Machine Learning Library
5
5
  Author-email: Fede Raimondo <f.raimondo@fz-juelich.de>, Sami Hamdan <s.hamdan@fz-juelich.de>
6
6
  Maintainer-email: Sami Hamdan <s.hamdan@fz-juelich.de>
{julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/julearn.egg-info/SOURCES.txt RENAMED
@@ -61,6 +61,7 @@ docs/changes/newsfragments/233.misc
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  docs/changes/newsfragments/234.doc
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  docs/changes/newsfragments/235.doc
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  docs/changes/newsfragments/236.bugfix
64
+ docs/changes/newsfragments/245.bugfix
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  docs/changes/newsfragments/47.feature
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  docs/images/corrected_ttest.png
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  docs/images/final_estimator.png
{julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/README.md RENAMED
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{julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/setup.cfg RENAMED
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{julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/setup.py RENAMED
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{julearn-0.3.1.dev111 → julearn-0.3.1.dev112}/tox.ini RENAMED
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