jinns 1.1.0__tar.gz → 1.3.0__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (182) hide show
  1. {jinns-1.1.0 → jinns-1.3.0}/.gitignore +4 -0
  2. {jinns-1.1.0 → jinns-1.3.0}/.gitlab-ci.yml +12 -7
  3. {jinns-1.1.0 → jinns-1.3.0}/.pre-commit-config.yaml +2 -2
  4. jinns-1.3.0/Notebooks/ODE/1D_Generalized_Lotka_Volterra.ipynb +783 -0
  5. jinns-1.3.0/Notebooks/ODE/linear_fo_equation.ipynb +534 -0
  6. {jinns-1.1.0 → jinns-1.3.0}/Notebooks/ODE/systems_biology_informed_neural_network.ipynb +47 -45
  7. jinns-1.3.0/Notebooks/PDE/1D_non_stationary_Burgers.ipynb +756 -0
  8. jinns-1.3.0/Notebooks/PDE/1D_non_stationary_Fisher_KPP_Bounded_Domain.ipynb +831 -0
  9. jinns-1.3.0/Notebooks/PDE/2D_Heat_inverse_problem.ipynb +872 -0
  10. {jinns-1.1.0 → jinns-1.3.0}/Notebooks/PDE/2D_Navier_Stokes_PipeFlow.ipynb +90 -118
  11. jinns-1.3.0/Notebooks/PDE/2D_Navier_Stokes_PipeFlow_Metamodel_hyperpinn.ipynb +1402 -0
  12. jinns-1.3.0/Notebooks/PDE/2D_Navier_Stokes_PipeFlow_SoftConstraints.ipynb +1134 -0
  13. {jinns-1.1.0 → jinns-1.3.0}/Notebooks/PDE/2D_Poisson_inverse_problem.ipynb +40 -32
  14. jinns-1.3.0/Notebooks/PDE/2D_non_stationary_OU.ipynb +1059 -0
  15. jinns-1.3.0/Notebooks/PDE/Reaction_Diffusion_2D_heterogenous_model.ipynb +1782 -0
  16. jinns-1.3.0/Notebooks/PDE/Reaction_Diffusion_2D_homogeneous_metamodel_hyperpinn_diffrax.ipynb +979 -0
  17. jinns-1.1.0/Notebooks/Tutorials/1D_non_stationary_Burger_JointEstimation_Vanilla.ipynb → jinns-1.3.0/Notebooks/Tutorials/1D_non_stationary_Burgers_JointEstimation_Vanilla.ipynb +128 -95
  18. jinns-1.3.0/Notebooks/Tutorials/implementing_your_own_PDE_problem.ipynb +740 -0
  19. jinns-1.3.0/Notebooks/Tutorials/introducing_validation_loss.ipynb +663 -0
  20. {jinns-1.1.0 → jinns-1.3.0}/Notebooks/Tutorials/load_save_model.ipynb +23 -26
  21. jinns-1.3.0/PKG-INFO +127 -0
  22. jinns-1.3.0/README.md +99 -0
  23. jinns-1.3.0/docs/api/advanced/differential_operators.md +30 -0
  24. jinns-1.3.0/docs/api/datagenerators/datagenerators_core.md +21 -0
  25. jinns-1.3.0/docs/api/datagenerators/datagenerators_other.md +15 -0
  26. {jinns-1.1.0 → jinns-1.3.0}/docs/api/loss/dynamic_loss.md +1 -1
  27. jinns-1.3.0/docs/api/pinn/hyperpinn.md +3 -0
  28. jinns-1.3.0/docs/api/pinn/pinn.md +7 -0
  29. jinns-1.3.0/docs/api/pinn/ppinn.md +3 -0
  30. jinns-1.3.0/docs/api/pinn/save_load.md +5 -0
  31. jinns-1.3.0/docs/api/pinn/spinn.md +7 -0
  32. jinns-1.3.0/docs/api/solver.md +7 -0
  33. {jinns-1.1.0 → jinns-1.3.0}/docs/changelog.md +19 -3
  34. {jinns-1.1.0 → jinns-1.3.0}/docs/index.md +14 -6
  35. jinns-1.3.0/img/jinns-diagram.png +0 -0
  36. {jinns-1.1.0 → jinns-1.3.0}/jinns/data/_Batchs.py +4 -8
  37. {jinns-1.1.0 → jinns-1.3.0}/jinns/data/_DataGenerators.py +534 -343
  38. {jinns-1.1.0 → jinns-1.3.0}/jinns/loss/_DynamicLoss.py +152 -175
  39. {jinns-1.1.0 → jinns-1.3.0}/jinns/loss/_DynamicLossAbstract.py +25 -73
  40. {jinns-1.1.0 → jinns-1.3.0}/jinns/loss/_LossODE.py +4 -4
  41. {jinns-1.1.0 → jinns-1.3.0}/jinns/loss/_LossPDE.py +102 -74
  42. {jinns-1.1.0 → jinns-1.3.0}/jinns/loss/__init__.py +7 -6
  43. jinns-1.3.0/jinns/loss/_boundary_conditions.py +342 -0
  44. {jinns-1.1.0 → jinns-1.3.0}/jinns/loss/_loss_utils.py +95 -67
  45. jinns-1.3.0/jinns/loss/_operators.py +560 -0
  46. jinns-1.3.0/jinns/nn/__init__.py +7 -0
  47. jinns-1.3.0/jinns/nn/_hyperpinn.py +397 -0
  48. jinns-1.3.0/jinns/nn/_mlp.py +192 -0
  49. jinns-1.3.0/jinns/nn/_pinn.py +190 -0
  50. jinns-1.3.0/jinns/nn/_ppinn.py +203 -0
  51. {jinns-1.1.0/jinns/utils → jinns-1.3.0/jinns/nn}/_save_load.py +47 -31
  52. jinns-1.3.0/jinns/nn/_spinn.py +106 -0
  53. jinns-1.3.0/jinns/nn/_spinn_mlp.py +196 -0
  54. {jinns-1.1.0 → jinns-1.3.0}/jinns/plot/_plot.py +113 -100
  55. jinns-1.3.0/jinns/solver/_rar.py +270 -0
  56. {jinns-1.1.0 → jinns-1.3.0}/jinns/solver/_solve.py +87 -38
  57. jinns-1.3.0/jinns/solver/_utils.py +122 -0
  58. jinns-1.3.0/jinns/utils/__init__.py +1 -0
  59. {jinns-1.1.0 → jinns-1.3.0}/jinns/utils/_containers.py +3 -1
  60. {jinns-1.1.0 → jinns-1.3.0}/jinns/utils/_types.py +5 -4
  61. jinns-1.3.0/jinns/utils/_utils.py +96 -0
  62. jinns-1.3.0/jinns.egg-info/PKG-INFO +127 -0
  63. {jinns-1.1.0 → jinns-1.3.0}/jinns.egg-info/SOURCES.txt +56 -30
  64. {jinns-1.1.0 → jinns-1.3.0}/mkdocs.yml +19 -18
  65. {jinns-1.1.0 → jinns-1.3.0}/pyproject.toml +12 -0
  66. {jinns-1.1.0 → jinns-1.3.0}/tests/conftest.py +1 -0
  67. jinns-1.1.0/tests/dataGenerator_tests/test_CubicMeshPDENonStatio_eqx.py → jinns-1.3.0/tests/dataGenerator_tests/test_CubicMeshPDENonStatio.py +62 -34
  68. jinns-1.1.0/tests/dataGenerator_tests/test_CubicMeshPDEStatio_eqx.py → jinns-1.3.0/tests/dataGenerator_tests/test_CubicMeshPDEStatio.py +33 -6
  69. jinns-1.1.0/tests/dataGenerator_tests/test_DataGeneratorODE_eqx.py → jinns-1.3.0/tests/dataGenerator_tests/test_DataGeneratorODE.py +30 -1
  70. jinns-1.3.0/tests/loss_tests/test_lossPDEstatio.py +138 -0
  71. jinns-1.3.0/tests/loss_tests/test_norm_loss.py +92 -0
  72. jinns-1.3.0/tests/nn_tests/test_hyperpinns.py +109 -0
  73. jinns-1.3.0/tests/nn_tests/test_mlp.py +104 -0
  74. jinns-1.3.0/tests/nn_tests/test_pinn.py +84 -0
  75. jinns-1.3.0/tests/nn_tests/test_ppinn_mlp.py +107 -0
  76. jinns-1.3.0/tests/nn_tests/test_smlp.py +72 -0
  77. {jinns-1.1.0/tests/utils_tests → jinns-1.3.0/tests/nn_tests}/test_spinn.py +16 -13
  78. jinns-1.3.0/tests/operator_tests/test_divergence_fwd.py +73 -0
  79. jinns-1.3.0/tests/operator_tests/test_divergence_rev.py +59 -0
  80. jinns-1.3.0/tests/operator_tests/test_laplacian_fwd.py +56 -0
  81. jinns-1.3.0/tests/operator_tests/test_laplacian_rev.py +65 -0
  82. jinns-1.3.0/tests/operator_tests/test_vectorial_laplacian_fwd.py +111 -0
  83. jinns-1.3.0/tests/operator_tests/test_vectorial_laplacian_rev.py +111 -0
  84. {jinns-1.1.0 → jinns-1.3.0}/tests/parameters_tests/test_DerivativeKeysODE.py +16 -13
  85. jinns-1.3.0/tests/plot_tests/test_plot1D.py +88 -0
  86. jinns-1.3.0/tests/plot_tests/test_plot2D.py +72 -0
  87. {jinns-1.1.0 → jinns-1.3.0}/tests/save_load_tests/test_saving_loading_hyperpinn.py +18 -31
  88. {jinns-1.1.0 → jinns-1.3.0}/tests/save_load_tests/test_saving_loading_pinn.py +20 -22
  89. {jinns-1.1.0 → jinns-1.3.0}/tests/save_load_tests/test_saving_loading_spinn.py +6 -7
  90. jinns-1.1.0/tests/sharding_tests/test_Burger_x32_multiple_shardings_eqx.py → jinns-1.3.0/tests/sharding_tests/test_Burgers_x32_multiple_shardings.py +37 -103
  91. jinns-1.3.0/tests/solver_tests/test_Burgers_x32.py +106 -0
  92. jinns-1.3.0/tests/solver_tests/test_Burgers_x64.py +106 -0
  93. jinns-1.1.0/tests/solver_tests/test_Fisher_x32_eqx.py → jinns-1.3.0/tests/solver_tests/test_Fisher_x32.py +13 -60
  94. jinns-1.1.0/tests/solver_tests/test_Fisher_x64_eqx.py → jinns-1.3.0/tests/solver_tests/test_Fisher_x64.py +14 -62
  95. jinns-1.1.0/tests/solver_tests/test_GLV_x32_eqx.py → jinns-1.3.0/tests/solver_tests/test_GLV_x32.py +16 -8
  96. jinns-1.1.0/tests/solver_tests/test_GLV_x64_eqx.py → jinns-1.3.0/tests/solver_tests/test_GLV_x64.py +16 -8
  97. jinns-1.1.0/tests/solver_tests/test_NSPipeFlow_x32_eqx.py → jinns-1.3.0/tests/solver_tests/test_NSPipeFlow_x32.py +10 -6
  98. jinns-1.1.0/tests/solver_tests/test_NSPipeFlow_x64_eqx.py → jinns-1.3.0/tests/solver_tests/test_NSPipeFlow_x64.py +11 -8
  99. jinns-1.3.0/tests/solver_tests/test_OU1D_statio_x32.py +134 -0
  100. jinns-1.1.0/tests/solver_tests/test_OU2D_x32_eqx.py → jinns-1.3.0/tests/solver_tests/test_OU2D_x32.py +21 -58
  101. {jinns-1.1.0 → jinns-1.3.0}/tests/solver_tests/test_nan_params_catch.py +9 -4
  102. {jinns-1.1.0 → jinns-1.3.0}/tests/solver_tests/test_parameter_tracker.py +15 -51
  103. {jinns-1.1.0 → jinns-1.3.0}/tests/solver_tests/test_rar_algorithm.py +34 -40
  104. jinns-1.1.0/tests/solver_tests_hyperpinn/test_NSPipeFlow_x32_eqx.py → jinns-1.3.0/tests/solver_tests_hyperpinn/test_NSPipeFlow_x32_hyperpinn.py +23 -13
  105. jinns-1.3.0/tests/solver_tests_spinn/test_Burgers_x32_spinn.py +113 -0
  106. jinns-1.1.0/tests/solver_tests_spinn/test_Fisher_x32_eqx.py → jinns-1.3.0/tests/solver_tests_spinn/test_Fisher_x32_spinn.py +23 -65
  107. jinns-1.1.0/tests/solver_tests_spinn/test_NSPipeFlow_x32_spinn_eqx.py → jinns-1.3.0/tests/solver_tests_spinn/test_NSPipeFlow_x32_spinn.py +6 -5
  108. jinns-1.1.0/tests/solver_tests_spinn/test_OU2D_x32_eqx.py → jinns-1.3.0/tests/solver_tests_spinn/test_OU2D_x32_spinn.py +22 -52
  109. jinns-1.1.0/tests/solver_tests_spinn/test_ReactionDiffusion_nonhomo_x64_eqx.py → jinns-1.3.0/tests/solver_tests_spinn/test_ReactionDiffusion_nonhomo_x64_spinn.py +26 -72
  110. jinns-1.3.0/tests/utils_tests/test_solver_utils.py +143 -0
  111. jinns-1.3.0/tests/utils_tests/test_subtract_with_check.py +23 -0
  112. jinns-1.3.0/tests/validation_tests/test_vanilla_validation.py +146 -0
  113. jinns-1.1.0/Notebooks/ODE/1D_Generalized_Lotka_Volterra.ipynb +0 -813
  114. jinns-1.1.0/Notebooks/ODE/linear_fo_equation.ipynb +0 -581
  115. jinns-1.1.0/Notebooks/PDE/1D_non_stationary_Burger.ipynb +0 -814
  116. jinns-1.1.0/Notebooks/PDE/1D_non_stationary_Fisher_KPP_Bounded_Domain.ipynb +0 -883
  117. jinns-1.1.0/Notebooks/PDE/2D_Heat_inverse_problem.ipynb +0 -923
  118. jinns-1.1.0/Notebooks/PDE/2D_Navier_Stokes_PipeFlow_Metamodel_hyperpinn.ipynb +0 -1432
  119. jinns-1.1.0/Notebooks/PDE/2D_Navier_Stokes_PipeFlow_SoftConstraints.ipynb +0 -1226
  120. jinns-1.1.0/Notebooks/PDE/2D_non_stationary_OU.ipynb +0 -1163
  121. jinns-1.1.0/Notebooks/PDE/Reaction_Diffusion_2D_heterogenous_model.ipynb +0 -1890
  122. jinns-1.1.0/Notebooks/PDE/Reaction_Diffusion_2D_homogeneous_metamodel_hyperpinn_diffrax.ipynb +0 -1002
  123. jinns-1.1.0/Notebooks/Tutorials/implementing_your_own_PDE_problem.ipynb +0 -699
  124. jinns-1.1.0/Notebooks/Tutorials/introducing_validation_loss.ipynb +0 -694
  125. jinns-1.1.0/PKG-INFO +0 -85
  126. jinns-1.1.0/README.md +0 -57
  127. jinns-1.1.0/docs/api/advanced/differential_operators.md +0 -22
  128. jinns-1.1.0/docs/api/pinn/hyperpinn.md +0 -5
  129. jinns-1.1.0/docs/api/pinn/pinn.md +0 -5
  130. jinns-1.1.0/docs/api/pinn/save_load.md +0 -5
  131. jinns-1.1.0/docs/api/pinn/spinn.md +0 -5
  132. jinns-1.1.0/jinns/loss/_boundary_conditions.py +0 -473
  133. jinns-1.1.0/jinns/loss/_operators.py +0 -305
  134. jinns-1.1.0/jinns/solver/_rar.py +0 -575
  135. jinns-1.1.0/jinns/utils/__init__.py +0 -4
  136. jinns-1.1.0/jinns/utils/_hyperpinn.py +0 -410
  137. jinns-1.1.0/jinns/utils/_pinn.py +0 -334
  138. jinns-1.1.0/jinns/utils/_spinn.py +0 -268
  139. jinns-1.1.0/jinns/utils/_utils.py +0 -68
  140. jinns-1.1.0/jinns.egg-info/PKG-INFO +0 -85
  141. jinns-1.1.0/tests/runtests.sh +0 -40
  142. jinns-1.1.0/tests/solver_tests/test_Burger_x32_eqx.py +0 -149
  143. jinns-1.1.0/tests/solver_tests/test_Burger_x64_eqx.py +0 -149
  144. jinns-1.1.0/tests/solver_tests_spinn/test_Burger_x32_eqx.py +0 -153
  145. jinns-1.1.0/tests/utils_tests/test_hyperpinns.py +0 -138
  146. jinns-1.1.0/tests/utils_tests/test_pinn.py +0 -131
  147. {jinns-1.1.0 → jinns-1.3.0}/AUTHORS +0 -0
  148. {jinns-1.1.0 → jinns-1.3.0}/LICENSE +0 -0
  149. {jinns-1.1.0 → jinns-1.3.0}/Notebooks/ODE/sbinn_data/glucose.dat +0 -0
  150. {jinns-1.1.0 → jinns-1.3.0}/Notebooks/ODE/sbinn_data/meal.dat +0 -0
  151. {jinns-1.1.0 → jinns-1.3.0}/Notebooks/PDE/2d_nonstatio_ou_standardsampling.png +0 -0
  152. {jinns-1.1.0 → jinns-1.3.0}/Notebooks/PDE/OU_1D_nonstatio_solution_grid.npy +0 -0
  153. {jinns-1.1.0 → jinns-1.3.0}/Notebooks/Tutorials/burger_solution_grid.npy +0 -0
  154. {jinns-1.1.0 → jinns-1.3.0}/codemeta.json +0 -0
  155. {jinns-1.1.0 → jinns-1.3.0}/docs/README.md +0 -0
  156. {jinns-1.1.0 → jinns-1.3.0}/docs/_static/custom_css.css +0 -0
  157. {jinns-1.1.0 → jinns-1.3.0}/docs/_static/favicon.png +0 -0
  158. {jinns-1.1.0 → jinns-1.3.0}/docs/api/advanced/derivative_keys.md +0 -0
  159. {jinns-1.1.0 → jinns-1.3.0}/docs/api/loss/loss_xde.md +0 -0
  160. {jinns-1.1.0 → jinns-1.3.0}/docs/api/loss/systems_of_xde.md +0 -0
  161. {jinns-1.1.0 → jinns-1.3.0}/docs/api/plot.md +0 -0
  162. {jinns-1.1.0 → jinns-1.3.0}/docs/doc_requirements.txt +0 -0
  163. {jinns-1.1.0 → jinns-1.3.0}/docs/javascripts/katex.js +0 -0
  164. {jinns-1.1.0 → jinns-1.3.0}/docs/maths/fokker_planck.md +0 -0
  165. {jinns-1.1.0 → jinns-1.3.0}/docs/maths/introduction_to_pinns.md +0 -0
  166. {jinns-1.1.0 → jinns-1.3.0}/jinns/__init__.py +0 -0
  167. {jinns-1.1.0 → jinns-1.3.0}/jinns/data/__init__.py +0 -0
  168. {jinns-1.1.0 → jinns-1.3.0}/jinns/experimental/__init__.py +0 -0
  169. {jinns-1.1.0 → jinns-1.3.0}/jinns/experimental/_diffrax_solver.py +0 -0
  170. {jinns-1.1.0 → jinns-1.3.0}/jinns/loss/_loss_weights.py +0 -0
  171. {jinns-1.1.0 → jinns-1.3.0}/jinns/parameters/__init__.py +0 -0
  172. {jinns-1.1.0 → jinns-1.3.0}/jinns/parameters/_derivative_keys.py +0 -0
  173. {jinns-1.1.0 → jinns-1.3.0}/jinns/parameters/_params.py +0 -0
  174. {jinns-1.1.0 → jinns-1.3.0}/jinns/plot/__init__.py +0 -0
  175. {jinns-1.1.0 → jinns-1.3.0}/jinns/solver/__init__.py +0 -0
  176. {jinns-1.1.0 → jinns-1.3.0}/jinns/validation/__init__.py +0 -0
  177. {jinns-1.1.0 → jinns-1.3.0}/jinns/validation/_validation.py +0 -0
  178. {jinns-1.1.0 → jinns-1.3.0}/jinns.egg-info/dependency_links.txt +0 -0
  179. {jinns-1.1.0 → jinns-1.3.0}/jinns.egg-info/requires.txt +0 -0
  180. {jinns-1.1.0 → jinns-1.3.0}/jinns.egg-info/top_level.txt +0 -0
  181. {jinns-1.1.0 → jinns-1.3.0}/setup.cfg +0 -0
  182. /jinns-1.1.0/tests/dataGenerator_tests/test_DataGeneratorParameter_eqx.py → /jinns-1.3.0/tests/dataGenerator_tests/test_DataGeneratorParameter.py +0 -0
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  - id: black
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14
  stages: [commit]