jarvisplot 1.4.2__tar.gz → 2.0.1__tar.gz

{jarvisplot-1.4.2 → jarvisplot-2.0.1}/JarvisPLOT.egg-info/PKG-INFO

@@ -1,11 +1,12 @@
 Metadata-Version: 2.4
 Name: JarvisPLOT
-Version: 1.4.2
+Version: 2.0.1
 Summary: Jarvis-PLOT: YAML-driven plotting engine
 Requires-Python: >=3.10
 Description-Content-Type: text/markdown
 Requires-Dist: loguru
 Requires-Dist: pyyaml
+Requires-Dist: ruamel.yaml>=0.18
 Requires-Dist: jsonschema
 Requires-Dist: Jarvis-Operas>=1.1.4
 Requires-Dist: numpy
@@ -17,6 +18,7 @@ Requires-Dist: sympy
 Requires-Dist: scipy
 Requires-Dist: shapely
 Requires-Dist: deepmerge
+Requires-Dist: rich
 
 # Jarvis-PLOT
 
@@ -25,15 +27,18 @@ but it can also be used as a **standalone scientific plotting tool**.
 
 It provides a simple command-line interface (CLI) to generate publication-quality figures from YAML configuration files, with most layout and style decisions handled by predefined profiles and style cards.
 
+Current package version: **1.4.2**.
+
 ---
 
 ## Installation
 
 ```bash
-pip install Jarvis-PLOT
+pip install JarvisPLOT
 ```
 
-The PyPI distribution name is now `Jarvis-PLOT`.
+The PyPI / distribution name is `JarvisPLOT` (normalized wheel name: `jarvisplot`).
+The product name remains **Jarvis-PLOT**.
 The Python import package and entrypoint remain unchanged:
 
 ```python
@@ -44,31 +49,53 @@ import jarvisplot
 jplot path/to/config.yaml
 ```
 
-If you have an older environment that still uses the historical package name, replace:
+If you have an older environment that still uses a historical package name, replace:
 
 ```bash
-pip uninstall jarvisplot
-pip install Jarvis-PLOT
+pip uninstall jarvisplot Jarvis-PLOT JarvisPLOT
+pip install JarvisPLOT
 ```
 
 ## Command-Line Usage
 
-Display help information:
+Human help uses the same fixed-column Rich panels as Jarvis-HEP V2 / Portal:
 
 ```bash
 jplot -h
+jplot validate -h
+jplot man                  # manual index
+jplot man workflow         # topic page
 ```
 
-Run Jarvis-PLOT with one or more YAML configuration files:
+Render (bare path — there is no `jplot run`):
 
 ```bash
 jplot path/to/config.yaml
+jplot path/to/config.yaml --rebuild-cache
 ```
 
-Rebuild local cache for the current project workdir:
+Discover / judge (write YAML yourself in an editor):
 
 ```bash
-jplot path/to/config.yaml --rebuild-cache
+jplot data describe samples.csv --json
+jplot cap methods --json
+jplot doctor plot.yaml --json
+jplot man workflow --json          # agent-structured manual
+jplot config expand plot.yaml --figure p --write   # type: → layers
+```
+
+Render a Jarvis-HEP flowchart scene JSON:
+
+```bash
+jplot flowchart path/to/scene.json
+# optional output path:
+jplot flowchart path/to/scene.json -o path/to/out.png
+```
+
+Library form:
+
+```python
+from jarvisplot import render_flowchart, render_flowchart_file
 ```
 
 ### Project Workdir and Cache
@@ -130,14 +157,17 @@ and evidence summary behavior.
 ### Required Packages
 - `numpy`
 - `pandas`
+- `polars`
 - `matplotlib`
 - `pyyaml`
 - `jsonschema`
 - `scipy` — numerical utilities
 - `h5py` — required for loading HDF5 data files
 - `shapely`
-- `scipy`
 - `sympy`
+- `loguru`
+- `deepmerge`
+- `Jarvis-Operas>=1.1.4`
 
 ### Github Page
 [https://github.com/Pengxuan-Zhu-Phys/Jarvis-PLOT](https://github.com/Pengxuan-Zhu-Phys/Jarvis-PLOT)
@@ -154,6 +184,7 @@ Tracked project docs live in `docs/`.
 - `docs/context/CODE_MAP_JARVIS_PLOT.md` - concrete code owner map
 - `docs/context/JARVIS_PLOT_FRAMEWORK_LOGIC.md` - runtime execution contract
 - `docs/roadmap/IMPLEMENTATION_ROADMAP.md` - active backlog and future work list
+- `docs/specs/AGENT_DATA_API.md` - planned agent bridge (spec only)
 - `docs/dev/DEVELOPER_RULES.md` - current pipeline and cache rules
 - `docs/dev/MEMORY_OPTIMIZATION_GUIDE.md` - narrow-table memory notes
 

jarvisplot-2.0.1/JarvisPLOT.egg-info/SOURCES.txt

@@ -0,0 +1,212 @@
+README.md
+pyproject.toml
+JarvisPLOT.egg-info/PKG-INFO
+JarvisPLOT.egg-info/SOURCES.txt
+JarvisPLOT.egg-info/dependency_links.txt
+JarvisPLOT.egg-info/entry_points.txt
+JarvisPLOT.egg-info/requires.txt
+JarvisPLOT.egg-info/top_level.txt
+jarvisplot/__init__.py
+jarvisplot/agent_digest.py
+jarvisplot/agent_io.py
+jarvisplot/cache_store.py
+jarvisplot/capabilities.py
+jarvisplot/cli.py
+jarvisplot/cli_help.py
+jarvisplot/client.py
+jarvisplot/column_demand.py
+jarvisplot/column_probe.py
+jarvisplot/config.py
+jarvisplot/config_address.py
+jarvisplot/core.py
+jarvisplot/core_assets.py
+jarvisplot/core_runtime.py
+jarvisplot/data_access.py
+jarvisplot/data_loader.py
+jarvisplot/data_loader_hdf5.py
+jarvisplot/data_loader_runtime.py
+jarvisplot/data_loader_summary.py
+jarvisplot/diagnostic_guidance.py
+jarvisplot/diagnostics.py
+jarvisplot/dryrun_runtime.py
+jarvisplot/expr_names.py
+jarvisplot/fix_apply.py
+jarvisplot/flowchart.py
+jarvisplot/inner_func.py
+jarvisplot/man_catalog.py
+jarvisplot/man_methods.py
+jarvisplot/man_render_agent.py
+jarvisplot/man_render_human.py
+jarvisplot/man_transforms.py
+jarvisplot/memtrace.py
+jarvisplot/method_contracts.py
+jarvisplot/render_health.py
+jarvisplot/schema_catalog.py
+jarvisplot/schema_diagnostics.py
+jarvisplot/templates_catalog.py
+jarvisplot/transform_contracts.py
+jarvisplot/validation.py
+jarvisplot/yaml_io.py
+jarvisplot/Figure/__init__.py
+jarvisplot/Figure/adapters_rect.py
+jarvisplot/Figure/adapters_ternary.py
+jarvisplot/Figure/colorbar_runtime.py
+jarvisplot/Figure/config_runtime.py
+jarvisplot/Figure/data_pipelines.py
+jarvisplot/Figure/density_cell_runtime.py
+jarvisplot/Figure/design_runtime.py
+jarvisplot/Figure/dynesty_runtime.py
+jarvisplot/Figure/figure.py
+jarvisplot/Figure/figure_types.py
+jarvisplot/Figure/helper.py
+jarvisplot/Figure/interp_2d_runtime.py
+jarvisplot/Figure/interp_natural_neighbor.py
+jarvisplot/Figure/interp_natural_neighbor_exact.py
+jarvisplot/Figure/layer_runtime.py
+jarvisplot/Figure/layout_runtime.py
+jarvisplot/Figure/method_registry.py
+jarvisplot/Figure/posterior_density_runtime.py
+jarvisplot/Figure/posterior_hpd.py
+jarvisplot/Figure/posterior_mesh.py
+jarvisplot/Figure/preprocessor.py
+jarvisplot/Figure/preprocessor_runtime.py
+jarvisplot/Figure/profile_runtime.py
+jarvisplot/Figure/style_runtime.py
+jarvisplot/Figure/cards/std_axes_adapter_config.json
+jarvisplot/cards/args.json
+jarvisplot/cards/style_preference.json
+jarvisplot/cards/a4paper/1x1/ternary.json
+jarvisplot/cards/a4paper/2x1/dynesty_runplot.json
+jarvisplot/cards/a4paper/2x1/rect.json
+jarvisplot/cards/a4paper/2x1/rect5x1.json
+jarvisplot/cards/a4paper/2x1/rect_cmap.json
+jarvisplot/cards/a4paper/2x1/ternary.json
+jarvisplot/cards/a4paper/2x1/ternary_cmap.json
+jarvisplot/cards/a4paper/4x1/rect.json
+jarvisplot/cards/a4paper/4x1/rect_cmap.json
+jarvisplot/cards/a4paper/4x1/ternary.json
+jarvisplot/cards/a4paper/4x1/ternary_cmap.json
+jarvisplot/cards/colors/colormaps.json
+jarvisplot/cards/default/output.json
+jarvisplot/cards/flowchart/default.json
+jarvisplot/cards/gambit/1x1/ternary.json
+jarvisplot/cards/gambit/2x1/rect_cmap.json
+jarvisplot/cards/gambit/2x1/ternary.json
+jarvisplot/cards/gambit/2x1/ternary_cmap.json
+jarvisplot/cards/icons/JarvisHEP.png
+jarvisplot/cards/icons/gambit.png
+jarvisplot/cards/icons/gambit_small.png
+jarvisplot/cards/icons/flowchart/JarvisHEP.png
+jarvisplot/cards/icons/flowchart/calculator.png
+jarvisplot/cards/icons/flowchart/inputfile.png
+jarvisplot/cards/icons/flowchart/opera.png
+jarvisplot/cards/icons/flowchart/outputfile.png
+jarvisplot/cards/icons/flowchart/sampler.png
+jarvisplot/manual_cards/agent-output.yaml
+jarvisplot/manual_cards/cli-map.yaml
+jarvisplot/manual_cards/data-columns.yaml
+jarvisplot/manual_cards/diagnostics.yaml
+jarvisplot/manual_cards/dryrun-viz.yaml
+jarvisplot/manual_cards/layer-method.yaml
+jarvisplot/manual_cards/manifest.yaml
+jarvisplot/manual_cards/method_notes.yaml
+jarvisplot/manual_cards/style-axes.yaml
+jarvisplot/manual_cards/type-posterior-2d.yaml
+jarvisplot/manual_cards/type-profile-2d.yaml
+jarvisplot/manual_cards/validate.yaml
+jarvisplot/manual_cards/workflow.yaml
+jarvisplot/manual_cards/yaml-root.yaml
+jarvisplot/schema/manifest.json
+jarvisplot/schema/plot-config.json
+jarvisplot/schema/core/common.json
+jarvisplot/schema/core/dataset.json
+jarvisplot/schema/core/figure.json
+jarvisplot/schema/core/layer.json
+jarvisplot/schema/core/transform.json
+jarvisplot/schema/methods/bar.json
+jarvisplot/schema/methods/barh.json
+jarvisplot/schema/methods/contour.json
+jarvisplot/schema/methods/contourf.json
+jarvisplot/schema/methods/dynesty_runplot.json
+jarvisplot/schema/methods/errorbar.json
+jarvisplot/schema/methods/fill.json
+jarvisplot/schema/methods/fill_between.json
+jarvisplot/schema/methods/fill_betweenx.json
+jarvisplot/schema/methods/hist.json
+jarvisplot/schema/methods/imshow.json
+jarvisplot/schema/methods/jpcontour.json
+jarvisplot/schema/methods/jpcontourf.json
+jarvisplot/schema/methods/jpfield.json
+jarvisplot/schema/methods/pcolor.json
+jarvisplot/schema/methods/pcolormesh.json
+jarvisplot/schema/methods/plot.json
+jarvisplot/schema/methods/quiver.json
+jarvisplot/schema/methods/scatter.json
+jarvisplot/schema/methods/step.json
+jarvisplot/schema/methods/tricontour.json
+jarvisplot/schema/methods/tricontourf.json
+jarvisplot/schema/methods/tripcolor.json
+jarvisplot/schema/methods/tripcolor_axes.json
+jarvisplot/schema/methods/triplot.json
+jarvisplot/schema/methods/voronoi.json
+jarvisplot/schema/methods/voronoif.json
+jarvisplot/utils/__init__.py
+jarvisplot/utils/cmaps.py
+jarvisplot/utils/dataframes.py
+jarvisplot/utils/expression.py
+jarvisplot/utils/interpolator.py
+jarvisplot/utils/pathing.py
+jarvisplot/verbs/__init__.py
+jarvisplot/verbs/cap.py
+jarvisplot/verbs/config_cmd.py
+jarvisplot/verbs/data.py
+jarvisplot/verbs/doctor.py
+jarvisplot/verbs/dryrun.py
+jarvisplot/verbs/explain.py
+jarvisplot/verbs/man.py
+jarvisplot/verbs/suggest.py
+jarvisplot/verbs/template.py
+jarvisplot/verbs/validate.py
+tests/test_agent_digest.py
+tests/test_agent_envelope.py
+tests/test_axis_title.py
+tests/test_capabilities.py
+tests/test_cli_help.py
+tests/test_cli_verbs.py
+tests/test_cmaps.py
+tests/test_column_existence.py
+tests/test_config_addressing.py
+tests/test_config_edit.py
+tests/test_config_expand.py
+tests/test_data_access.py
+tests/test_data_describe.py
+tests/test_data_head_eval.py
+tests/test_data_loader_contracts.py
+tests/test_data_pipelines.py
+tests/test_density_cell_transform.py
+tests/test_diagnostic_guidance.py
+tests/test_docs_status_labels.py
+tests/test_doctor_partial.py
+tests/test_explain.py
+tests/test_figure_contracts.py
+tests/test_figure_type_expander.py
+tests/test_fix_application.py
+tests/test_flowchart_renderer.py
+tests/test_interp_2d_transform.py
+tests/test_interp_natural_neighbor.py
+tests/test_interpolator_contracts.py
+tests/test_jpcontour_methods.py
+tests/test_man_cli.py
+tests/test_method_contracts.py
+tests/test_parse_data_metadata.py
+tests/test_pathing_contracts.py
+tests/test_posterior_hpd.py
+tests/test_render_health.py
+tests/test_row_ledger.py
+tests/test_schema_catalog.py
+tests/test_suggest.py
+tests/test_suggest_axes.py
+tests/test_template_catalog.py
+tests/test_template_json.py
+tests/test_transform_contracts.py
+tests/test_validate_no_matplotlib.py

{jarvisplot-1.4.2 → jarvisplot-2.0.1}/JarvisPLOT.egg-info/requires.txt

@@ -1,5 +1,6 @@
 loguru
 pyyaml
+ruamel.yaml>=0.18
 jsonschema
 Jarvis-Operas>=1.1.4
 numpy
@@ -11,3 +12,4 @@ sympy
 scipy
 shapely
 deepmerge
+rich

{jarvisplot-1.4.2 → jarvisplot-2.0.1}/PKG-INFO

@@ -1,11 +1,12 @@
 Metadata-Version: 2.4
 Name: JarvisPLOT
-Version: 1.4.2
+Version: 2.0.1
 Summary: Jarvis-PLOT: YAML-driven plotting engine
 Requires-Python: >=3.10
 Description-Content-Type: text/markdown
 Requires-Dist: loguru
 Requires-Dist: pyyaml
+Requires-Dist: ruamel.yaml>=0.18
 Requires-Dist: jsonschema
 Requires-Dist: Jarvis-Operas>=1.1.4
 Requires-Dist: numpy
@@ -17,6 +18,7 @@ Requires-Dist: sympy
 Requires-Dist: scipy
 Requires-Dist: shapely
 Requires-Dist: deepmerge
+Requires-Dist: rich
 
 # Jarvis-PLOT
 
@@ -25,15 +27,18 @@ but it can also be used as a **standalone scientific plotting tool**.
 
 It provides a simple command-line interface (CLI) to generate publication-quality figures from YAML configuration files, with most layout and style decisions handled by predefined profiles and style cards.
 
+Current package version: **1.4.2**.
+
 ---
 
 ## Installation
 
 ```bash
-pip install Jarvis-PLOT
+pip install JarvisPLOT
 ```
 
-The PyPI distribution name is now `Jarvis-PLOT`.
+The PyPI / distribution name is `JarvisPLOT` (normalized wheel name: `jarvisplot`).
+The product name remains **Jarvis-PLOT**.
 The Python import package and entrypoint remain unchanged:
 
 ```python
@@ -44,31 +49,53 @@ import jarvisplot
 jplot path/to/config.yaml
 ```
 
-If you have an older environment that still uses the historical package name, replace:
+If you have an older environment that still uses a historical package name, replace:
 
 ```bash
-pip uninstall jarvisplot
-pip install Jarvis-PLOT
+pip uninstall jarvisplot Jarvis-PLOT JarvisPLOT
+pip install JarvisPLOT
 ```
 
 ## Command-Line Usage
 
-Display help information:
+Human help uses the same fixed-column Rich panels as Jarvis-HEP V2 / Portal:
 
 ```bash
 jplot -h
+jplot validate -h
+jplot man                  # manual index
+jplot man workflow         # topic page
 ```
 
-Run Jarvis-PLOT with one or more YAML configuration files:
+Render (bare path — there is no `jplot run`):
 
 ```bash
 jplot path/to/config.yaml
+jplot path/to/config.yaml --rebuild-cache
 ```
 
-Rebuild local cache for the current project workdir:
+Discover / judge (write YAML yourself in an editor):
 
 ```bash
-jplot path/to/config.yaml --rebuild-cache
+jplot data describe samples.csv --json
+jplot cap methods --json
+jplot doctor plot.yaml --json
+jplot man workflow --json          # agent-structured manual
+jplot config expand plot.yaml --figure p --write   # type: → layers
+```
+
+Render a Jarvis-HEP flowchart scene JSON:
+
+```bash
+jplot flowchart path/to/scene.json
+# optional output path:
+jplot flowchart path/to/scene.json -o path/to/out.png
+```
+
+Library form:
+
+```python
+from jarvisplot import render_flowchart, render_flowchart_file
 ```
 
 ### Project Workdir and Cache
@@ -130,14 +157,17 @@ and evidence summary behavior.
 ### Required Packages
 - `numpy`
 - `pandas`
+- `polars`
 - `matplotlib`
 - `pyyaml`
 - `jsonschema`
 - `scipy` — numerical utilities
 - `h5py` — required for loading HDF5 data files
 - `shapely`
-- `scipy`
 - `sympy`
+- `loguru`
+- `deepmerge`
+- `Jarvis-Operas>=1.1.4`
 
 ### Github Page
 [https://github.com/Pengxuan-Zhu-Phys/Jarvis-PLOT](https://github.com/Pengxuan-Zhu-Phys/Jarvis-PLOT)
@@ -154,6 +184,7 @@ Tracked project docs live in `docs/`.
 - `docs/context/CODE_MAP_JARVIS_PLOT.md` - concrete code owner map
 - `docs/context/JARVIS_PLOT_FRAMEWORK_LOGIC.md` - runtime execution contract
 - `docs/roadmap/IMPLEMENTATION_ROADMAP.md` - active backlog and future work list
+- `docs/specs/AGENT_DATA_API.md` - planned agent bridge (spec only)
 - `docs/dev/DEVELOPER_RULES.md` - current pipeline and cache rules
 - `docs/dev/MEMORY_OPTIMIZATION_GUIDE.md` - narrow-table memory notes
 

{jarvisplot-1.4.2 → jarvisplot-2.0.1}/README.md

@@ -5,15 +5,18 @@ but it can also be used as a **standalone scientific plotting tool**.
 
 It provides a simple command-line interface (CLI) to generate publication-quality figures from YAML configuration files, with most layout and style decisions handled by predefined profiles and style cards.
 
+Current package version: **1.4.2**.
+
 ---
 
 ## Installation
 
 ```bash
-pip install Jarvis-PLOT
+pip install JarvisPLOT
 ```
 
-The PyPI distribution name is now `Jarvis-PLOT`.
+The PyPI / distribution name is `JarvisPLOT` (normalized wheel name: `jarvisplot`).
+The product name remains **Jarvis-PLOT**.
 The Python import package and entrypoint remain unchanged:
 
 ```python
@@ -24,31 +27,53 @@ import jarvisplot
 jplot path/to/config.yaml
 ```
 
-If you have an older environment that still uses the historical package name, replace:
+If you have an older environment that still uses a historical package name, replace:
 
 ```bash
-pip uninstall jarvisplot
-pip install Jarvis-PLOT
+pip uninstall jarvisplot Jarvis-PLOT JarvisPLOT
+pip install JarvisPLOT
 ```
 
 ## Command-Line Usage
 
-Display help information:
+Human help uses the same fixed-column Rich panels as Jarvis-HEP V2 / Portal:
 
 ```bash
 jplot -h
+jplot validate -h
+jplot man                  # manual index
+jplot man workflow         # topic page
 ```
 
-Run Jarvis-PLOT with one or more YAML configuration files:
+Render (bare path — there is no `jplot run`):
 
 ```bash
 jplot path/to/config.yaml
+jplot path/to/config.yaml --rebuild-cache
 ```
 
-Rebuild local cache for the current project workdir:
+Discover / judge (write YAML yourself in an editor):
 
 ```bash
-jplot path/to/config.yaml --rebuild-cache
+jplot data describe samples.csv --json
+jplot cap methods --json
+jplot doctor plot.yaml --json
+jplot man workflow --json          # agent-structured manual
+jplot config expand plot.yaml --figure p --write   # type: → layers
+```
+
+Render a Jarvis-HEP flowchart scene JSON:
+
+```bash
+jplot flowchart path/to/scene.json
+# optional output path:
+jplot flowchart path/to/scene.json -o path/to/out.png
+```
+
+Library form:
+
+```python
+from jarvisplot import render_flowchart, render_flowchart_file
 ```
 
 ### Project Workdir and Cache
@@ -110,14 +135,17 @@ and evidence summary behavior.
 ### Required Packages
 - `numpy`
 - `pandas`
+- `polars`
 - `matplotlib`
 - `pyyaml`
 - `jsonschema`
 - `scipy` — numerical utilities
 - `h5py` — required for loading HDF5 data files
 - `shapely`
-- `scipy`
 - `sympy`
+- `loguru`
+- `deepmerge`
+- `Jarvis-Operas>=1.1.4`
 
 ### Github Page
 [https://github.com/Pengxuan-Zhu-Phys/Jarvis-PLOT](https://github.com/Pengxuan-Zhu-Phys/Jarvis-PLOT)
@@ -134,6 +162,7 @@ Tracked project docs live in `docs/`.
 - `docs/context/CODE_MAP_JARVIS_PLOT.md` - concrete code owner map
 - `docs/context/JARVIS_PLOT_FRAMEWORK_LOGIC.md` - runtime execution contract
 - `docs/roadmap/IMPLEMENTATION_ROADMAP.md` - active backlog and future work list
+- `docs/specs/AGENT_DATA_API.md` - planned agent bridge (spec only)
 - `docs/dev/DEVELOPER_RULES.md` - current pipeline and cache rules
 - `docs/dev/MEMORY_OPTIMIZATION_GUIDE.md` - narrow-table memory notes