iowarp-core 0.6.2__tar.gz

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  1. iowarp_core-0.6.2/.clang-format +3 -0
  2. iowarp_core-0.6.2/.clangd +32 -0
  3. iowarp_core-0.6.2/CLAUDE.md +712 -0
  4. iowarp_core-0.6.2/CMakeLists.txt +720 -0
  5. iowarp_core-0.6.2/CMakePresets.json +119 -0
  6. iowarp_core-0.6.2/CPPLINT.cfg +3 -0
  7. iowarp_core-0.6.2/LICENSE +36 -0
  8. iowarp_core-0.6.2/MANIFEST.in +67 -0
  9. iowarp_core-0.6.2/PKG-INFO +726 -0
  10. iowarp_core-0.6.2/QUICKSTART.md +76 -0
  11. iowarp_core-0.6.2/README.md +700 -0
  12. iowarp_core-0.6.2/ai-prompts/phase1-merging.md +45 -0
  13. iowarp_core-0.6.2/ai-prompts/phase2-compiling.md +8 -0
  14. iowarp_core-0.6.2/ai-prompts/phase3-readme.md +4 -0
  15. iowarp_core-0.6.2/ai-prompts/phase4-docs.md +0 -0
  16. iowarp_core-0.6.2/ai-prompts/phase5-distributed.md +10 -0
  17. iowarp_core-0.6.2/ai-prompts/phase6-uv.md +9 -0
  18. iowarp_core-0.6.2/ai-prompts/phase7-cmake.md +33 -0
  19. iowarp_core-0.6.2/cmake/IowarpCoreCommon.cmake +721 -0
  20. iowarp_core-0.6.2/cmake/IowarpCoreConfig.cmake.in +132 -0
  21. iowarp_core-0.6.2/cmake/detect/CMakeLists.txt +156 -0
  22. iowarp_core-0.6.2/context-assimilation-engine/.codespellrc +2 -0
  23. iowarp_core-0.6.2/context-assimilation-engine/CMakeLists.txt +77 -0
  24. iowarp_core-0.6.2/context-assimilation-engine/README.md +125 -0
  25. iowarp_core-0.6.2/context-assimilation-engine/ai-prompts/phase1-runtime.md +14 -0
  26. iowarp_core-0.6.2/context-assimilation-engine/ai-prompts/phase2-file-assim.md +102 -0
  27. iowarp_core-0.6.2/context-assimilation-engine/ai-prompts/phase3-tests.md +52 -0
  28. iowarp_core-0.6.2/context-assimilation-engine/ai-prompts/phase4-hdf5.md +10 -0
  29. iowarp_core-0.6.2/context-assimilation-engine/ai-prompts/phase5-globus.md +9 -0
  30. iowarp_core-0.6.2/context-assimilation-engine/ai-prompts/phase6-launch.md +10 -0
  31. iowarp_core-0.6.2/context-assimilation-engine/chimaera_repo.yaml +8 -0
  32. iowarp_core-0.6.2/context-assimilation-engine/config/README.md +85 -0
  33. iowarp_core-0.6.2/context-assimilation-engine/config/wrp_config_example.yaml +50 -0
  34. iowarp_core-0.6.2/context-assimilation-engine/core/CMakeLists.txt +140 -0
  35. iowarp_core-0.6.2/context-assimilation-engine/core/chimaera_mod.yaml +15 -0
  36. iowarp_core-0.6.2/context-assimilation-engine/core/include/wrp_cae/core/autogen/core_methods.h +23 -0
  37. iowarp_core-0.6.2/context-assimilation-engine/core/include/wrp_cae/core/constants.h +14 -0
  38. iowarp_core-0.6.2/context-assimilation-engine/core/include/wrp_cae/core/core_client.h +120 -0
  39. iowarp_core-0.6.2/context-assimilation-engine/core/include/wrp_cae/core/core_runtime.h +68 -0
  40. iowarp_core-0.6.2/context-assimilation-engine/core/include/wrp_cae/core/core_tasks.h +106 -0
  41. iowarp_core-0.6.2/context-assimilation-engine/core/include/wrp_cae/core/factory/assimilation_ctx.h +54 -0
  42. iowarp_core-0.6.2/context-assimilation-engine/core/include/wrp_cae/core/factory/assimilator_factory.h +53 -0
  43. iowarp_core-0.6.2/context-assimilation-engine/core/include/wrp_cae/core/factory/base_assimilator.h +26 -0
  44. iowarp_core-0.6.2/context-assimilation-engine/core/include/wrp_cae/core/factory/binary_file_assimilator.h +61 -0
  45. iowarp_core-0.6.2/context-assimilation-engine/core/include/wrp_cae/core/factory/globus_file_assimilator.h +176 -0
  46. iowarp_core-0.6.2/context-assimilation-engine/core/include/wrp_cae/core/factory/hdf5_file_assimilator.h +117 -0
  47. iowarp_core-0.6.2/context-assimilation-engine/core/src/autogen/core_lib_exec.cc +244 -0
  48. iowarp_core-0.6.2/context-assimilation-engine/core/src/core_client.cc +51 -0
  49. iowarp_core-0.6.2/context-assimilation-engine/core/src/core_runtime.cc +95 -0
  50. iowarp_core-0.6.2/context-assimilation-engine/core/src/factory/assimilator_factory.cc +84 -0
  51. iowarp_core-0.6.2/context-assimilation-engine/core/src/factory/binary_file_assimilator.cc +288 -0
  52. iowarp_core-0.6.2/context-assimilation-engine/core/src/factory/globus_file_assimilator.cc +717 -0
  53. iowarp_core-0.6.2/context-assimilation-engine/core/src/factory/hdf5_file_assimilator.cc +569 -0
  54. iowarp_core-0.6.2/context-assimilation-engine/core/util/wrp_cae_omni.cc +147 -0
  55. iowarp_core-0.6.2/context-assimilation-engine/data/A46_xx.arrow.parquet +0 -0
  56. iowarp_core-0.6.2/context-assimilation-engine/data/A46_xx.csv +3328 -0
  57. iowarp_core-0.6.2/context-assimilation-engine/data/A46_xx.feather +0 -0
  58. iowarp_core-0.6.2/context-assimilation-engine/data/A46_xx.h5 +0 -0
  59. iowarp_core-0.6.2/context-assimilation-engine/data/A46_xx.parquet +0 -0
  60. iowarp_core-0.6.2/context-assimilation-engine/data/A46_xx.zlib.h5 +0 -0
  61. iowarp_core-0.6.2/context-assimilation-engine/data/README.md +5 -0
  62. iowarp_core-0.6.2/context-assimilation-engine/data/afrl_list.md +184 -0
  63. iowarp_core-0.6.2/context-assimilation-engine/data/csv_ingestion_recipe.yaml +17 -0
  64. iowarp_core-0.6.2/context-assimilation-engine/data/datahub.csv +4 -0
  65. iowarp_core-0.6.2/context-assimilation-engine/data/file_assets.csv +2 -0
  66. iowarp_core-0.6.2/context-assimilation-engine/docs/launch.md +200 -0
  67. iowarp_core-0.6.2/context-assimilation-engine/docs/omni.md +383 -0
  68. iowarp_core-0.6.2/context-assimilation-engine/test/CMakeLists.txt +22 -0
  69. iowarp_core-0.6.2/context-assimilation-engine/test/integration/globus_matsci/.env +1 -0
  70. iowarp_core-0.6.2/context-assimilation-engine/test/integration/globus_matsci/README.md +119 -0
  71. iowarp_core-0.6.2/context-assimilation-engine/test/integration/globus_matsci/REST_AUTH_GUIDE.md +118 -0
  72. iowarp_core-0.6.2/context-assimilation-engine/test/integration/globus_matsci/download_test.sh +79 -0
  73. iowarp_core-0.6.2/context-assimilation-engine/test/integration/globus_matsci/get_oauth_token.py +112 -0
  74. iowarp_core-0.6.2/context-assimilation-engine/test/integration/globus_matsci/matsci_globus_omni.yaml +29 -0
  75. iowarp_core-0.6.2/context-assimilation-engine/test/integration/globus_matsci/run_test.sh +121 -0
  76. iowarp_core-0.6.2/context-assimilation-engine/test/integration/globus_matsci/setup_collection_consent.py +43 -0
  77. iowarp_core-0.6.2/context-assimilation-engine/test/integration/globus_matsci/wrp_conf.yaml +24 -0
  78. iowarp_core-0.6.2/context-assimilation-engine/test/unit/CMakeLists.txt +215 -0
  79. iowarp_core-0.6.2/context-assimilation-engine/test/unit/README.md +260 -0
  80. iowarp_core-0.6.2/context-assimilation-engine/test/unit/binary_assim/binary_assim_omni.yaml +9 -0
  81. iowarp_core-0.6.2/context-assimilation-engine/test/unit/binary_assim/test_binary_assim.cc +322 -0
  82. iowarp_core-0.6.2/context-assimilation-engine/test/unit/error_test/test_error_handling.cc +261 -0
  83. iowarp_core-0.6.2/context-assimilation-engine/test/unit/external/CMakeLists.txt +86 -0
  84. iowarp_core-0.6.2/context-assimilation-engine/test/unit/external/external_integration_test.cc +158 -0
  85. iowarp_core-0.6.2/context-assimilation-engine/test/unit/hdf5_assim/hdf5_assim_omni.yaml +56 -0
  86. iowarp_core-0.6.2/context-assimilation-engine/test/unit/hdf5_assim/test_hdf5_assim.cc +326 -0
  87. iowarp_core-0.6.2/context-assimilation-engine/test/unit/range_test/test_range_assim.cc +220 -0
  88. iowarp_core-0.6.2/context-assimilation-engine/test/unit/wrp_config.yaml +70 -0
  89. iowarp_core-0.6.2/context-exploration-engine/.datahubenv +13 -0
  90. iowarp_core-0.6.2/context-exploration-engine/CMakeLists.txt +13 -0
  91. iowarp_core-0.6.2/context-exploration-engine/README.md +175 -0
  92. iowarp_core-0.6.2/context-exploration-engine/api/CMakeLists.txt +154 -0
  93. iowarp_core-0.6.2/context-exploration-engine/api/README.md +349 -0
  94. iowarp_core-0.6.2/context-exploration-engine/api/demo/demo.py +222 -0
  95. iowarp_core-0.6.2/context-exploration-engine/api/demo/docker-compose.yml +42 -0
  96. iowarp_core-0.6.2/context-exploration-engine/api/demo/wrp_conf.yaml +59 -0
  97. iowarp_core-0.6.2/context-exploration-engine/api/include/wrp_cee/api/context_interface.h +108 -0
  98. iowarp_core-0.6.2/context-exploration-engine/api/src/context_interface.cc +312 -0
  99. iowarp_core-0.6.2/context-exploration-engine/api/src/python_bindings.cc +98 -0
  100. iowarp_core-0.6.2/context-exploration-engine/api/test/CMakeLists.txt +87 -0
  101. iowarp_core-0.6.2/context-exploration-engine/api/test/test_context_bundle.cc +261 -0
  102. iowarp_core-0.6.2/context-exploration-engine/api/test/test_context_destroy.cc +113 -0
  103. iowarp_core-0.6.2/context-exploration-engine/api/test/test_context_interface.py +275 -0
  104. iowarp_core-0.6.2/context-exploration-engine/api/test/test_context_query.cc +96 -0
  105. iowarp_core-0.6.2/context-exploration-engine/api/test/wrp_config.yaml +54 -0
  106. iowarp_core-0.6.2/context-exploration-engine/api/wrp_cee_api-config-version.cmake +43 -0
  107. iowarp_core-0.6.2/context-exploration-engine/api/wrp_cee_api-config.cmake +37 -0
  108. iowarp_core-0.6.2/context-exploration-engine/api/wrp_cee_api-config.cmake.in +13 -0
  109. iowarp_core-0.6.2/context-exploration-engine/docs/python_api.md +523 -0
  110. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/COPYING +127 -0
  111. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/HDFCompass.1file.spec +98 -0
  112. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/HDFCompass.1folder.spec +103 -0
  113. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/HDFCompass.desktop +14 -0
  114. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/HDFCompass.icns +0 -0
  115. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/HDFCompass.ico +0 -0
  116. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/HDFCompass.py +38 -0
  117. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/MANIFEST.in +19 -0
  118. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/README.rst +91 -0
  119. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/additional_legal/ADIOS_Copyrights_and_Licenses.txt +34 -0
  120. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/additional_legal/HydroPro_Icons_Terms.txt +33 -0
  121. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/additional_legal/KDE_Oxygen_Icon_Set_Copyright_and_License.txt +169 -0
  122. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/additional_legal/NumPy_Copyright_and_License.txt +32 -0
  123. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/additional_legal/PyDAP_Copyright_and_License.txt +23 -0
  124. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/additional_legal/PyInstaller_Copyrights_and_Licenses.txt +359 -0
  125. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/additional_legal/Python_Copyright_and_License.txt +54 -0
  126. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/additional_legal/cartopy_Copyrights_and_Licenses.txt +51 -0
  127. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/additional_legal/h5py_Copyrights_and_Licenses.txt +239 -0
  128. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/additional_legal/hydroffice_bag_Copyrights_and_Licenses.txt +42 -0
  129. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/additional_legal/matplotlib_Copyright_and_License.txt +52 -0
  130. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/additional_legal/wxWidgets_Copyrights_and_Licenses.txt +667 -0
  131. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/appveyor.yml +66 -0
  132. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/data/adios/adios_test.bp +0 -0
  133. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/data/adios/adios_test.bp.dir/adios_test.bp.0 +0 -0
  134. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/data/asc/sample.asc +12 -0
  135. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/data/bag/bdb_00.bag +0 -0
  136. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/data/hdf5/Download/download_data.py +46 -0
  137. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/data/hdf5/complex.h5 +0 -0
  138. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/data/hdf5/tall.h5 +0 -0
  139. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/data/hdf5/tcomplex.h5 +0 -0
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  141. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/data/hdf5/tcompound_complex.h5 +0 -0
  142. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/data/hdf5/tcompound_complex2.h5 +0 -0
  143. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/data/parquet/sample_float16.parquet +0 -0
  144. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/dmg.png +0 -0
  145. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/docs/conf.py +284 -0
  146. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/docs/data_model.rst +312 -0
  147. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/docs/how_to_contribute.rst +4 -0
  148. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/docs/how_to_freeze.rst +4 -0
  149. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/docs/how_to_install.rst +4 -0
  150. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/docs/how_to_release.rst +26 -0
  151. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/docs/how_to_use.rst +4 -0
  152. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/docs/index.rst +49 -0
  153. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/docs/license.rst +128 -0
  154. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/docs/make.bat +263 -0
  155. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/docs/requirements.rst +4 -0
  156. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/hdf_compass/__init__.py +10 -0
  157. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/hdf_compass/adios_model/__init__.py +20 -0
  158. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/hdf_compass/adios_model/model.py +339 -0
  159. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/hdf_compass/adios_model/test.py +26 -0
  160. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/hdf_compass/array_model/__init__.py +18 -0
  161. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/hdf_compass/array_model/model.py +314 -0
  162. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/hdf_compass/array_model/test.py +20 -0
  163. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/hdf_compass/asc_model/__init__.py +18 -0
  164. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/hdf_compass/asc_model/model.py +198 -0
  165. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/hdf_compass/asc_model/test.py +22 -0
  166. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/hdf_compass/bag_model/__init__.py +21 -0
  167. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/hdf_compass/bag_model/model.py +935 -0
  168. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/hdf_compass/bag_model/test.py +23 -0
  169. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/hdf_compass/compass_model/__init__.py +19 -0
  170. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/hdf_compass/compass_model/icons/array_16.png +0 -0
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  178. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/hdf_compass/compass_model/icons/license.txt +165 -0
  179. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/hdf_compass/compass_model/icons/readme.txt +5 -0
  180. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/hdf_compass/compass_model/icons/text_16.png +0 -0
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  185. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/hdf_compass/compass_model/icons/xml_64.png +0 -0
  186. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/hdf_compass/compass_model/model.py +549 -0
  187. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/hdf_compass/compass_model/test.py +220 -0
  188. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/hdf_compass/compass_viewer/__init__.py +18 -0
  189. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/hdf_compass/compass_viewer/__main__.py +38 -0
  190. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/hdf_compass/compass_viewer/array/__init__.py +18 -0
  191. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/hdf_compass/compass_viewer/array/frame.py +930 -0
  192. iowarp_core-0.6.2/context-exploration-engine/hdf-compass/hdf_compass/compass_viewer/array/plot.py +434 -0
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21
+ - undeclared_var_use
22
+ - expected_class_name
23
+ - unknown_typename
24
+ - fatal_too_many_errors
25
+
26
+ InlayHints:
27
+ Enabled: true
28
+ ParameterNames: true
29
+ DeducedTypes: true
30
+
31
+ Hover:
32
+ ShowAKA: true