invenio-subjects-mesh-lite 2024.3.2__tar.gz → 2025.1.15__tar.gz

invenio_subjects_mesh_lite-2025.1.15/CHANGES.md

@@ -0,0 +1,21 @@
+# Changes
+
+Version 2025.1.15 (released 2025-01-15)
+
+- MeSH 2025
+
+Version 2024.3.6 (released 2024-08-09)
+
+- make compatible with InvenioRDM v12
+
+Version 2024.3.5 (released 2024-05-22)
+
+- patch fix from galter-subjects-utils
+
+Version 2023.1.4 (released 2023-11-7)
+
+- Polished release
+
+Version 0.1.0 (released 2023-10-30)
+
+- Initial public release.

{invenio-subjects-mesh-lite-2024.3.2/invenio_subjects_mesh_lite.egg-info → invenio_subjects_mesh_lite-2025.1.15}/PKG-INFO

@@ -1,6 +1,6 @@
-Metadata-Version: 2.1
+Metadata-Version: 2.2
 Name: invenio-subjects-mesh-lite
-Version: 2024.3.2
+Version: 2025.1.15
 Summary: MeSH subject terms without qualifiers
 Author-email: Northwestern University <DL_FSM_GDS@e.northwestern.edu>
 License: MIT License
@@ -35,15 +35,16 @@ Classifier: Programming Language :: Python
 Classifier: Topic :: Internet :: WWW/HTTP :: Dynamic Content
 Classifier: Topic :: Software Development :: Libraries :: Python Modules
 Classifier: Programming Language :: Python :: 3
-Classifier: Programming Language :: Python :: 3.8
 Classifier: Programming Language :: Python :: 3.9
-Classifier: Programming Language :: Python :: 3.10
-Requires-Python: >=3.8
+Classifier: Programming Language :: Python :: 3.11
+Classifier: Programming Language :: Python :: 3.12
+Requires-Python: >=3.9
 Description-Content-Type: text/markdown
 License-File: LICENSE
-Requires-Dist: galter-subjects-utils<2.0,>=0.3.3
+Requires-Dist: galter-subjects-utils<2.0,>=0.4.2
 Provides-Extra: dev
 Requires-Dist: check-manifest>=0.49; extra == "dev"
+Requires-Dist: invenio-search[opensearch2]<3.0,>=2.1.0; extra == "dev"
 Requires-Dist: invoke<3.0,>=2.2; extra == "dev"
 Requires-Dist: pyyaml>=5.4.1; extra == "dev"
 Requires-Dist: pytest-invenio<3.0.0,>=2.1.1; extra == "dev"
@@ -52,6 +53,10 @@ Requires-Dist: pytest-invenio<3.0.0,>=2.1.1; extra == "dev"
 
 *MeSH topical subject terms without qualifiers for InvenioRDM*
 
+<a href="https://pypi.org/project/invenio-subjects-mesh-lite/">
+  <img src="https://img.shields.io/pypi/v/invenio-subjects-mesh-lite.svg">
+</a>
+
 Install this extension to get Medical Subject Headings topics without qualifiers into your instance.
 
 If you are looking for a larger MeSH vocabulary with qualifiers, use
@@ -84,11 +89,11 @@ table will be provided to indicate version cross-compatibility.
 
 ## Usage
 
-There are 2 types of users for this package. Instance administrators and package maintainers.
+There are 2 types of users for this package. Instance operators and package maintainers.
 
-### Instance administrators
+### Instance operators
 
-For instance administrators, after you have installed the extension as per the steps above, you will want to reload your instance's fixtures: `pipenv run invenio rdm-records fixtures`. This will install the new terms in your instance.
+For instance operators, after you have installed the extension as per the steps above, you will want to reload your instance's fixtures: `pipenv run invenio rdm-records fixtures`. This will install the new terms in your instance.
 
 Alternatively, or if you want to update your already loaded subjects to a new listing (e.g. from one year's list to another), you can update your instance's MeSH subjects as per below. Updating subjects this way takes care of everything for you: the subjects themselves and the records/drafts using those subjects. **WARNING** This operation can _remove_ subjects.
 
@@ -110,14 +115,24 @@ In particular, options for `galter_subjects update` allow you to store renamed,
 
 When a new list of MeSH term comes out, this package should be updated. Here we show how.
 
+**Pre-requisite/Context**
+
+[Install the distribution package for development](#development) before you do anything.
+
+**Commands**
+
+Once you have it installed, you can run the following commands in the isolated virtualenv:
+
 ```bash
 # In this project
 # Download up-to-date listings
-pipenv run invenio galter_subjects mesh download -d /path/to/downloads/storage/ -y YEAR
+(venv) invenio galter_subjects mesh download -d /path/to/downloads/storage/ -y YEAR
 # Generate file containing initial listing
-pipenv run invenio galter_subjects mesh file -d /path/to/downloads/storage/ -y YEAR -f topic -o invenio_subjects_mesh_lite/vocabularies/subjects_mesh.csv
+(venv) invenio galter_subjects mesh file -d /path/to/downloads/storage/ -y YEAR -f topic -o invenio_subjects_mesh_lite/vocabularies/subjects_mesh.csv
 ```
 
+Sorting the resulting csv is a nice touch for humans to better parse the changes between versions.
+
 When you are happy with the list, bump the version in `pyproject.toml` and release it.
 
 

{invenio-subjects-mesh-lite-2024.3.2 → invenio_subjects_mesh_lite-2025.1.15}/README.md

@@ -2,6 +2,10 @@
 
 *MeSH topical subject terms without qualifiers for InvenioRDM*
 
+<a href="https://pypi.org/project/invenio-subjects-mesh-lite/">
+  <img src="https://img.shields.io/pypi/v/invenio-subjects-mesh-lite.svg">
+</a>
+
 Install this extension to get Medical Subject Headings topics without qualifiers into your instance.
 
 If you are looking for a larger MeSH vocabulary with qualifiers, use
@@ -34,11 +38,11 @@ table will be provided to indicate version cross-compatibility.
 
 ## Usage
 
-There are 2 types of users for this package. Instance administrators and package maintainers.
+There are 2 types of users for this package. Instance operators and package maintainers.
 
-### Instance administrators
+### Instance operators
 
-For instance administrators, after you have installed the extension as per the steps above, you will want to reload your instance's fixtures: `pipenv run invenio rdm-records fixtures`. This will install the new terms in your instance.
+For instance operators, after you have installed the extension as per the steps above, you will want to reload your instance's fixtures: `pipenv run invenio rdm-records fixtures`. This will install the new terms in your instance.
 
 Alternatively, or if you want to update your already loaded subjects to a new listing (e.g. from one year's list to another), you can update your instance's MeSH subjects as per below. Updating subjects this way takes care of everything for you: the subjects themselves and the records/drafts using those subjects. **WARNING** This operation can _remove_ subjects.
 
@@ -60,14 +64,24 @@ In particular, options for `galter_subjects update` allow you to store renamed,
 
 When a new list of MeSH term comes out, this package should be updated. Here we show how.
 
+**Pre-requisite/Context**
+
+[Install the distribution package for development](#development) before you do anything.
+
+**Commands**
+
+Once you have it installed, you can run the following commands in the isolated virtualenv:
+
 ```bash
 # In this project
 # Download up-to-date listings
-pipenv run invenio galter_subjects mesh download -d /path/to/downloads/storage/ -y YEAR
+(venv) invenio galter_subjects mesh download -d /path/to/downloads/storage/ -y YEAR
 # Generate file containing initial listing
-pipenv run invenio galter_subjects mesh file -d /path/to/downloads/storage/ -y YEAR -f topic -o invenio_subjects_mesh_lite/vocabularies/subjects_mesh.csv
+(venv) invenio galter_subjects mesh file -d /path/to/downloads/storage/ -y YEAR -f topic -o invenio_subjects_mesh_lite/vocabularies/subjects_mesh.csv
 ```
 
+Sorting the resulting csv is a nice touch for humans to better parse the changes between versions.
+
 When you are happy with the list, bump the version in `pyproject.toml` and release it.