invenio-app-rdm 13.0.0rc3__tar.gz → 13.0.0rc6__tar.gz

{invenio_app_rdm-13.0.0rc3 → invenio_app_rdm-13.0.0rc6}/CHANGES.rst

@@ -10,6 +10,32 @@
 Changes
 =======
 
+Version v13.0.0rc6 (released 2025-07-21)
+
+- fix: package.json and package-lock mismatch
+
+Version v13.0.0rc5 (released 2025-07-17)
+
+- migration: optimize script
+- upgrade_scripts: handle thesis custom field migration
+- version: bumped invenio-s3 version to include multipart upload
+- templates: macros: doi: Add copy button for DOIs
+- semantic-ui: components: CopyButton: add size prop
+- semantic-ui: landing_page: ExportButton: Add copy button
+- semantic-ui: componenets: add url fetching in copy button
+- semantic-ui: landing_page: add click event for cite all versions
+
+Version v13.0.0rc4 (released 2025-07-10)
+
+- pid-config: cast to bool RDM_(PARENT)_PERSISTENT_IDENTIFIERS required check
+- fix: default parent_doi_required to False
+- links: update doc links to updated ones
+- i18n: localize DOI labels
+- css: remove .invenio-accordion-field qualifier
+- css: use SemanticUI variables and fix class names
+- ui: ensure accordion caret icons rotate when opened/closed
+- config: add Data Package export format
+
 Version v13.0.0rc3 (released 2025-07-02)
 
 - deposit-ui: uppy uploader ui feature

{invenio_app_rdm-13.0.0rc3 → invenio_app_rdm-13.0.0rc6}/CONTRIBUTING.rst

@@ -1,6 +1,6 @@
 ..
     Copyright (C) 2020 CERN.
-    Copyright (C) 2020 Northwestern University.
+    Copyright (C) 2020-2025 Northwestern University.
 
     Invenio App RDM is free software; you can redistribute it and/or modify
     it under the terms of the MIT License; see LICENSE file for more details.
@@ -9,8 +9,8 @@ Contributing
 ============
 
 Contributions are welcome, and they are greatly appreciated! Every
-little bit helps, and credit will always be given. Additional documentation 
-can be found in the Invenio `maintainers guide <https://inveniordm.docs.cern.ch/maintenance/newcomers/#tools>`_.
+little bit helps, and credit will always be given. Additional documentation
+can be found in the `InvenioRDM community contribution guide <https://inveniordm.docs.cern.ch/community/>`_.
 
 
 Types of Contributions
@@ -71,15 +71,18 @@ Ready to contribute? Here's how to set up `invenio-app-rdm` for local developmen
 
       $ git clone git@github.com:your_name_here/invenio-app-rdm.git
 
-3. Install your local copy. Assuming you have
-   `pipenv <https://docs.pipenv.org/install/#installing-pipenv>`_, installed, this is how you
-   set up your fork for local development:
+3. Install your local copy into a virtualenv. Here we present two alternatives to do so:
+   the [`uv`](https://docs.astral.sh/uv/) or [pipenv](https://pipenv.pypa.io/en/latest/) tools.
+   The equivalent with any other tool is perfectly fine as well.
 
    .. code-block:: console
 
-      $ mkvirtualenv invenio-app-rdm
       $ cd invenio-app-rdm/
-      $ pip install -e ".[all]"
+      # with uv
+      $ uv venv
+      $ uv pip install -e ".[tests,opensearch2]"
+      # with pipenv
+      $ pipenv run pip install -e ".[tests,opensearch2]"
 
 4. Create a branch for local development:
 
@@ -89,11 +92,12 @@ Ready to contribute? Here's how to set up `invenio-app-rdm` for local developmen
 
    Now you can make your changes locally.
 
-5. When you're done making changes, check that your changes pass tests:
+5. When you're done making changes, check that your changes pass tests
+   (within an active virtual environment):
 
    .. code-block:: console
 
-      $ ./run-tests.sh
+      $ (venv) ./run-tests.sh
 
    The tests will provide you with test coverage and also check PEP8
    (code style), PEP257 (documentation), flake8 as well as build the Sphinx
@@ -122,6 +126,6 @@ Before you submit a pull request, check that it meets these guidelines:
 1. The pull request should include tests and must not decrease test coverage.
 2. If the pull request adds functionality, the docs should be updated. Put
    your new functionality into a function with a docstring.
-3. The pull request should work for Python 2.7, 3.3, 3.4 and 3.5. Check
-   https://github.com/inveniosoftware/invenio-app-rdm/actions?query=event%3Apull_request
+3. The pull request should work for the supported Python versions. Check
+   https://github.com/inveniosoftware/workflows/blob/master/.github/workflows/tests-python.yml
    and make sure that the tests pass for all supported Python versions.

{invenio_app_rdm-13.0.0rc3 → invenio_app_rdm-13.0.0rc6}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: invenio-app-rdm
-Version: 13.0.0rc3
+Version: 13.0.0rc6
 Summary: Invenio Research Data Management.
 Home-page: https://github.com/inveniosoftware/invenio-app-rdm
 Author: CERN
@@ -60,7 +60,7 @@ Requires-Dist: invenio-search[opensearch1]<4.0.0,>=3.0.0; extra == "opensearch1"
 Provides-Extra: opensearch2
 Requires-Dist: invenio-search[opensearch2]<4.0.0,>=3.0.0; extra == "opensearch2"
 Provides-Extra: s3
-Requires-Dist: invenio-s3<3.0.0,>=2.0.0; extra == "s3"
+Requires-Dist: invenio-s3<4.0.0,>=3.0.0; extra == "s3"
 Dynamic: license-file
 
 ..
@@ -101,6 +101,32 @@ https://inveniordm.docs.cern.ch
 Changes
 =======
 
+Version v13.0.0rc6 (released 2025-07-21)
+
+- fix: package.json and package-lock mismatch
+
+Version v13.0.0rc5 (released 2025-07-17)
+
+- migration: optimize script
+- upgrade_scripts: handle thesis custom field migration
+- version: bumped invenio-s3 version to include multipart upload
+- templates: macros: doi: Add copy button for DOIs
+- semantic-ui: components: CopyButton: add size prop
+- semantic-ui: landing_page: ExportButton: Add copy button
+- semantic-ui: componenets: add url fetching in copy button
+- semantic-ui: landing_page: add click event for cite all versions
+
+Version v13.0.0rc4 (released 2025-07-10)
+
+- pid-config: cast to bool RDM_(PARENT)_PERSISTENT_IDENTIFIERS required check
+- fix: default parent_doi_required to False
+- links: update doc links to updated ones
+- i18n: localize DOI labels
+- css: remove .invenio-accordion-field qualifier
+- css: use SemanticUI variables and fix class names
+- ui: ensure accordion caret icons rotate when opened/closed
+- config: add Data Package export format
+
 Version v13.0.0rc3 (released 2025-07-02)
 
 - deposit-ui: uppy uploader ui feature

{invenio_app_rdm-13.0.0rc3 → invenio_app_rdm-13.0.0rc6}/invenio_app_rdm/__init__.py

@@ -17,6 +17,6 @@
 #
 # See PEP 0440 for details - https://www.python.org/dev/peps/pep-0440
 
-__version__ = "13.0.0rc3"
+__version__ = "13.0.0rc6"
 
 __all__ = ("__version__",)

{invenio_app_rdm-13.0.0rc3 → invenio_app_rdm-13.0.0rc6}/invenio_app_rdm/config.py

@@ -903,6 +903,13 @@ APP_RDM_RECORD_EXPORTERS = {
         "content-type": "application/x-yaml",
         "filename": "{id}.yaml",
     },
+    "datapackage": {
+        "name": _("Data Package JSON"),
+        "serializer": "invenio_rdm_records.resources.serializers:DataPackageSerializer",
+        "params": {},
+        "content-type": "application/ld+json",
+        "filename": "{id}.json",
+    },
 }
 
 APP_RDM_RECORD_LANDING_PAGE_EXTERNAL_LINKS = []

{invenio_app_rdm-13.0.0rc3 → invenio_app_rdm-13.0.0rc6}/invenio_app_rdm/ext.py

@@ -33,10 +33,10 @@ def finalize_app(app):
 
 def init_config(app):
     """Initialize configuration."""
-    record_doi_required = (
+    record_doi_required = bool(
         app.config["RDM_PERSISTENT_IDENTIFIERS"].get("doi", {}).get("required")
     )
-    parent_doi_required = (
+    parent_doi_required = bool(
         app.config["RDM_PARENT_PERSISTENT_IDENTIFIERS"].get("doi", {}).get("required")
     )
 

{invenio_app_rdm-13.0.0rc3 → invenio_app_rdm-13.0.0rc6}/invenio_app_rdm/records_ui/templates/semantic-ui/invenio_app_rdm/records/macros/doi.html

@@ -6,15 +6,17 @@
 #}
 
 {% macro show_doi(doi_value, record_ui, badge_id="record-doi-badge", modal_id="doi-modal", subheader=None, parent_doi=false) %}
+  {%- set doi_link = record_ui["links"]["doi"] if not parent_doi else record_ui["links"]["parent_doi"] %}
   <dt class="ui tiny header">{{_('DOI')}}
     {% if subheader %}
-      <i><span class="doi sub header">{{subheader}}</span></i></dt>
+      <i><span class="doi sub header">{{subheader}}</span></i>
     {% endif %}
+  </dt>
   <dd>
-    <span class="get-badge" data-toggle="tooltip" data-placement="bottom" style="cursor: pointer;"
-      title="{{ _('Get the DOI badge!') }}">
-      <img id='{{badge_id}}' data-target="[data-modal='{{ doi_value }}']"
+    <span class="get-badge details-doi-section" data-toggle="tooltip" data-placement="bottom">
+      <img id='{{badge_id}}' data-target="[data-modal='{{ doi_value }}']" title="{{ _('Get the DOI badge!') }}"
         src="{{ url_for('invenio_formatter_badges.badge', title='DOI', value=doi_value, ext='svg') }}" alt="{{ doi_value }}" />
+      <div id="copy-button-{{ badge_id }}" class="copy-doi-button" data-value={{ doi_link }} data-size="mini"></div>
     </span>
 
     <div id="{{modal_id}}" class="ui modal fade badge-modal" data-modal="{{ doi_value }}">
@@ -27,7 +29,7 @@
           <pre>{{ doi_value }}</pre>
         </h4>
         {% from "semantic-ui/invenio_formatter/macros/badges.html" import badges_formats_list %}
-        {{ badges_formats_list(url_for('invenio_formatter_badges.badge', title='DOI', value=doi_value, ext='svg', _external=True, _scheme='https'), record_ui["links"]["parent_doi"] if parent_doi else record_ui["links"]["doi"]) }}
+        {{ badges_formats_list(url_for('invenio_formatter_badges.badge', title='DOI', value=doi_value, ext='svg', _external=True, _scheme='https'), doi_link) }}
       </div>
     </div>
   </dd>

{invenio_app_rdm-13.0.0rc3 → invenio_app_rdm-13.0.0rc6}/invenio_app_rdm/records_ui/views/deposits.py

@@ -3,7 +3,7 @@
 # Copyright (C) 2019-2025 CERN.
 # Copyright (C) 2019-2021 Northwestern University.
 # Copyright (C)      2021 TU Wien.
-# Copyright (C) 2022-2024 KTH Royal Institute of Technology
+# Copyright (C) 2022-2025 KTH Royal Institute of Technology
 # Copyright (C) 2023-2024 Graz University of Technology.
 #
 # Invenio App RDM is free software; you can redistribute it and/or modify it
@@ -100,9 +100,9 @@ def get_form_pids_config(record=None):
 
         pids_provider = {
             "scheme": scheme,
-            "field_label": "Digital Object Identifier",
-            "pid_label": "DOI",
-            "pid_placeholder": "Copy/paste your existing DOI here...",
+            "field_label": _("Digital Object Identifier"),
+            "pid_label": _("DOI"),
+            "pid_placeholder": _("Copy/paste your existing DOI here..."),
             "can_be_managed": can_be_managed,
             "can_be_unmanaged": can_be_unmanaged,
             "btn_label_discard_pid": _(

{invenio_app_rdm-13.0.0rc3 → invenio_app_rdm-13.0.0rc6}/invenio_app_rdm/theme/assets/semantic-ui/js/invenio_app_rdm/components/CopyButton.js

@@ -7,29 +7,38 @@
 import React, { Component } from "react";
 import PropTypes from "prop-types";
 import { Button, Popup } from "semantic-ui-react";
-import { CopyToClipboard } from "react-copy-to-clipboard";
 import { i18next } from "@translations/invenio_app_rdm/i18next";
 
 class SimpleCopyButton extends React.Component {
+  fetchUrl = async (url) => {
+    return await (await fetch(url)).text();
+  };
+
+  handleClick = async () => {
+    const { url, text, onCopy } = this.props;
+    let textToCopy = text;
+    if (url) {
+      textToCopy = await this.fetchUrl(url);
+    }
+
+    await navigator.clipboard.writeText(textToCopy);
+    onCopy(text);
+  };
+
   render() {
-    const { text, onCopy, hoverState } = this.props;
+    const { hoverState, size } = this.props;
 
     return (
-      <CopyToClipboard
-        text={text}
-        onCopy={() => {
-          onCopy(text);
-        }}
-      >
-        <Button
-          className="copy"
-          basic
-          icon="copy"
-          aria-label={i18next.t("Copy to clipboard")}
-          onMouseEnter={hoverState}
-          onMouseLeave={hoverState}
-        />
-      </CopyToClipboard>
+      <Button
+        className="copy"
+        basic
+        size={size}
+        icon="copy"
+        aria-label={i18next.t("Copy to clipboard")}
+        onClick={this.handleClick} // Handle click to fetch from url if url passed, otherwise use text from props
+        onMouseEnter={hoverState}
+        onMouseLeave={hoverState}
+      />
     );
   }
 }
@@ -37,11 +46,15 @@ class SimpleCopyButton extends React.Component {
 SimpleCopyButton.propTypes = {
   text: PropTypes.string.isRequired,
   onCopy: PropTypes.func.isRequired,
+  url: PropTypes.func,
   hoverState: PropTypes.func,
+  size: PropTypes.string,
 };
 
 SimpleCopyButton.defaultProps = {
   hoverState: null,
+  url: null,
+  size: "medium",
 };
 
 export class CopyButton extends Component {
@@ -86,12 +99,12 @@ export class CopyButton extends Component {
   };
 
   render() {
-    const { text, popUpPosition } = this.props;
+    const { popUpPosition, text, url, size } = this.props;
     const { confirmationPopupMsg, confirmationPopupIsOpen, hoverPopupIsOpen } =
       this.state;
 
     return (
-      text && (
+      (text || url) && ( // Ensure text or url is provided
         <Popup
           role="alert"
           open={hoverPopupIsOpen || confirmationPopupIsOpen}
@@ -103,7 +116,9 @@ export class CopyButton extends Component {
             <SimpleCopyButton
               text={text}
               onCopy={this.onCopy}
+              url={url}
               hoverState={this.hoverStateHandler}
+              size={size}
             />
           }
         />
@@ -115,9 +130,13 @@ export class CopyButton extends Component {
 CopyButton.propTypes = {
   popUpPosition: PropTypes.string,
   text: PropTypes.string,
+  url: PropTypes.func,
+  size: PropTypes.string,
 };
 
 CopyButton.defaultProps = {
   popUpPosition: "right center",
   text: "",
+  url: "",
+  size: "medium",
 };

{invenio_app_rdm-13.0.0rc3 → invenio_app_rdm-13.0.0rc6}/invenio_app_rdm/theme/assets/semantic-ui/js/invenio_app_rdm/landing_page/ExportDropdown.js

@@ -9,6 +9,7 @@ import React, { Component } from "react";
 import PropTypes from "prop-types";
 import { Grid, Dropdown, Button } from "semantic-ui-react";
 import { i18next } from "@translations/invenio_app_rdm/i18next";
+import { CopyButton } from "@js/invenio_app_rdm/components/CopyButton";
 
 export class ExportDropdown extends Component {
   constructor(props) {
@@ -18,6 +19,7 @@ export class ExportDropdown extends Component {
       selectedFormatUrl: formats[0]?.export_url,
     };
   }
+
   render() {
     const { formats } = this.props;
     const { selectedFormatUrl } = this.state;
@@ -31,7 +33,7 @@ export class ExportDropdown extends Component {
 
     return (
       <Grid>
-        <Grid.Column width={11}>
+        <Grid.Column width={10}>
           <Dropdown
             aria-label={i18next.t("Export selection")}
             selection
@@ -42,7 +44,7 @@ export class ExportDropdown extends Component {
             defaultValue={selectedFormatUrl}
           />
         </Grid.Column>
-        <Grid.Column width={5} className="pl-0">
+        <Grid.Column width={4} className="pl-0">
           <Button
             as="a"
             role="button"
@@ -53,6 +55,9 @@ export class ExportDropdown extends Component {
             {i18next.t("Export")}
           </Button>
         </Grid.Column>
+        <Grid.Column width={2} className="pl-0">
+          <CopyButton url={selectedFormatUrl} />
+        </Grid.Column>
       </Grid>
     );
   }

{invenio_app_rdm-13.0.0rc3 → invenio_app_rdm-13.0.0rc6}/invenio_app_rdm/theme/assets/semantic-ui/js/invenio_app_rdm/landing_page/theme.js

@@ -12,6 +12,10 @@ $("#record-doi-badge").on("click", function () {
   $("#doi-modal").modal("show");
 });
 
+$("#record-conceptdoi-badge").on("click", function () {
+  $("#conceptdoi-modal").modal("show");
+});
+
 $(".preview-link").on("click", function (event) {
   $("#preview-file-title").html(event.target.dataset.fileKey);
 });

{invenio_app_rdm-13.0.0rc3 → invenio_app_rdm-13.0.0rc6}/invenio_app_rdm/theme/assets/semantic-ui/js/invenio_app_rdm/theme.js

@@ -7,6 +7,7 @@
 
 import $ from "jquery";
 import { MultipleOptionsSearchBar } from "@js/invenio_search_ui/components";
+import { CopyButton } from "@js/invenio_app_rdm/components/CopyButton";
 import { i18next } from "@translations/invenio_app_rdm/i18next";
 import ReactDOM from "react-dom";
 import React from "react";
@@ -153,3 +154,11 @@ if (window.invenio) {
     }
   };
 }
+
+// Copy Buttons for DOI
+document.querySelectorAll(".copy-doi-button").forEach((element) => {
+  ReactDOM.render(
+    <CopyButton text={element.dataset.value} size={element.dataset.size} />,
+    element
+  );
+});

{invenio_app_rdm-13.0.0rc3 → invenio_app_rdm-13.0.0rc6}/invenio_app_rdm/theme/assets/semantic-ui/less/invenio_app_rdm/theme/globals/site.overrides

@@ -553,4 +553,9 @@ dl.details-list {
   }
 }
 
-
+.details-doi-section {
+  cursor: pointer;
+  display: flex;
+  align-items: center;
+  justify-content: space-between;
+}

{invenio_app_rdm-13.0.0rc3 → invenio_app_rdm-13.0.0rc6}/invenio_app_rdm/theme/assets/semantic-ui/less/invenio_app_rdm/theme/modules/accordion.overrides

@@ -3,6 +3,15 @@
   &.tab-menu-accordion {
     transform: none;
   }
+
+  transform: @activeIconTransform;
+}
+
+.ui.accordion .title .icon,
+.ui.accordion .accordion .title .icon {
+  transition: @iconTransition;
+  width: auto;
+  height: auto;
 }
 
 /* use these classes to change accordion title when up/down */

{invenio_app_rdm-13.0.0rc3 → invenio_app_rdm-13.0.0rc6}/invenio_app_rdm/theme/templates/semantic-ui/invenio_app_rdm/intro_section.html

@@ -1,6 +1,7 @@
 {#
   Copyright (C) 2019-2022 CERN.
   Copyright (C) 2014 KTH Royal Institute of Technology.
+  Copyright (C) 2025 Northwestern University.
 
   Invenio App RDM is free software; you can redistribute it and/or modify it
   under the terms of the MIT License; see LICENSE file for more details.
@@ -25,7 +26,7 @@
         </div>
         <div class="description">
           {{ _("Configure the datamodel, resource types, permissions and much more to make it suit your needs! For more information on how to do it visit the") }}
-          <a href="https://inveniordm.docs.cern.ch/install/configuration/" target="_blank">
+          <a href="https://inveniordm.docs.cern.ch/operate/customize/configuration/" target="_blank">
             {{ _("configuration section in the docs") }}
           </a>.
         </div>
@@ -42,7 +43,7 @@
         </div>
         <div class="description">
           {{ _("Customize the layout and adapt the styling to match your institution's. See how to do so") }}
-          <a href="https://inveniordm.docs.cern.ch/customize/" target="_blank">
+          <a href="https://inveniordm.docs.cern.ch/operate/customize/look-and-feel/" target="_blank">
             {{ _("here") }}
           </a>.
         </div>
@@ -54,11 +55,11 @@
         <div class="intro-step-list-image">3</div>
       </div>
       <div class="content">
-        <div class="header">{{ _("Run it!") }}</div>
+        <div class="header">{{ _("Use it!") }}</div>
         <div class="description">
-          {{ _("Run your InvenioRDM instance locally or in containers.") }}
-          <a href="https://inveniordm.docs.cern.ch/install/build-setup-run/#run_1" target="_blank">
-            {{ _("Run") }}
+          {{ _("Use and explore your InvenioRDM instance.") }}
+          <a href="https://inveniordm.docs.cern.ch/use/" target="_blank">
+            {{ _("Use") }}
           </a>.
         </div>
       </div>

{invenio_app_rdm-13.0.0rc3 → invenio_app_rdm-13.0.0rc6}/invenio_app_rdm/theme/webpack.py

@@ -52,7 +52,6 @@ theme = WebpackThemeBundle(
                 "luxon": "^1.23.0",
                 "path": "^0.12.7",
                 "prop-types": "^15.7.2",
-                "react-copy-to-clipboard": "^5.0.0",
                 "react-dnd": "^11.1.0",
                 "react-dnd-html5-backend": "^11.1.0",
                 "react-dropzone": "^11.0.0",

invenio_app_rdm-13.0.0rc6/invenio_app_rdm/upgrade_scripts/migrate_12_0_to_13_0.py

@@ -0,0 +1,136 @@
+# -*- coding: utf-8 -*-
+#
+# Copyright (C) 2023-2024 CERN.
+# Copyright (C) 2024-2025 Graz University of Technology.
+#
+# Invenio-App-RDM is free software; you can redistribute it and/or modify
+# it under the terms of the MIT License; see LICENSE file for more details.
+
+"""Record migration script from InvenioRDM 11.0 to 12.0.
+
+Disclaimer: This script is intended to be executed *only once*, namely when
+upgrading from InvenioRDM 11.0 to 12.0!
+If this script is executed at any other time, probably the best case scenario
+is that nothing happens!
+
+
+This script has been tested with following data:
+
+- record
+    - internal_notes
+"""
+
+from click import secho
+from invenio_access.permissions import system_identity
+from invenio_db import db
+from invenio_rdm_records.proxies import current_rdm_records_service as records_service
+from invenio_search.engine import dsl
+
+
+def run_upgrade(has, migrate):
+    """Run upgrade."""
+    record_success_counter = 0
+    record_error_counter = 0
+    draft_success_counter = 0
+    draft_error_counter = 0
+
+    # Handle published records
+    published_records = records_service.search(
+        system_identity,
+        params={"allversions": True, "include_deleted": True},
+        extra_filter=has,
+    )
+    for result in published_records.hits:
+        record = records_service.record_cls.pid.resolve(result["id"])
+        try:
+            migrate(record)
+            record_success_counter += 1
+        except Exception as error:
+            secho(f"> Error {repr(error)}", fg="red")
+            error = f"Record {record.pid.pid_value} failed to update"
+            record_error_counter += 1
+
+    # Handle draft records
+    draft_records = records_service.search_drafts(
+        system_identity,
+        params={"allversions": True},
+        extra_filter=has,
+    )
+    for result in draft_records.hits:
+        draft = records_service.draft_cls.pid.resolve(
+            result["id"],
+            registered_only=False,
+        )
+        try:
+            migrate(draft)
+            draft_success_counter += 1
+        except Exception as error:
+            secho(f"> Error {repr(error)}", fg="red")
+            error = f"Draft {draft.pid.pid_value} failed to update"
+            draft_error_counter += 1
+
+    if draft_error_counter > 0 or record_error_counter > 0:
+        db.session.rollback()
+        secho(
+            f"{record_error_counter} records had failures and {draft_error_counter} drafts had failures",
+            fg="red",
+        )
+        secho(
+            "The changes have been rolled back. Please fix the above listed errors and try the upgrade again",
+            fg="yellow",
+            err=True,
+        )
+    elif draft_success_counter > 0 or record_success_counter > 0:
+        db.session.commit()
+        secho(
+            f"{record_success_counter} records have been updated and {draft_error_counter} drafts have been updated",
+            fg="green",
+        )
+    else:
+        secho("nothing has been updated")
+
+
+def run_upgrade_for_thesis():
+    """Run upgrade for thesis."""
+
+    def migrate_thesis_university(record_or_draft):
+        custom_fields = record_or_draft.get("custom_fields", {})
+        university = custom_fields.get("thesis:university")
+        if university and "thesis:thesis" not in custom_fields:
+            custom_fields["thesis:thesis"] = {"university": university}
+
+        record_or_draft.commit()
+
+    # Common query filter
+    has_thesis = dsl.Q("exists", field="custom_fields.thesis:university")
+
+    secho("run upgrade for thesis has been started", fg="green")
+
+    run_upgrade(has_thesis, migrate_thesis_university)
+
+    secho("run upgrade for thesis has been finished", fg="green")
+
+
+def execute_upgrade():
+    """Execute the upgrade from InvenioRDM 12.0 to 13.0.0.
+
+    Please read the disclaimer on this module before thinking about executing
+    this function!
+    THIS MODULE IS WORK IN PROGRESS, UNTIL official v13 release
+
+    NOTE:
+    since the data upgrade steps are more selective now, the approach how to do
+    it has been changed. now the records/drafts which should be updated are
+    searched by a filter and then the updates are applied to those
+    records/drafts explicitly. this should improve speed and should make it
+    easier to upgrade large instances
+
+    """
+    secho("Starting data migration...", fg="green")
+
+    run_upgrade_for_thesis()
+
+
+# if the script is executed on its own, perform the upgrade
+if __name__ == "__main__":
+    execute_upgrade()