integrate_module 0.99.2__tar.gz → 0.99.3__tar.gz

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Files changed (25) hide show
  1. {integrate_module-0.99.2/integrate_module.egg-info → integrate_module-0.99.3}/PKG-INFO +1 -1
  2. {integrate_module-0.99.2 → integrate_module-0.99.3}/integrate/integrate_io.py +20 -1
  3. {integrate_module-0.99.2 → integrate_module-0.99.3/integrate_module.egg-info}/PKG-INFO +1 -1
  4. {integrate_module-0.99.2 → integrate_module-0.99.3}/pyproject.toml +1 -1
  5. {integrate_module-0.99.2 → integrate_module-0.99.3}/LICENSE +0 -0
  6. {integrate_module-0.99.2 → integrate_module-0.99.3}/README.md +0 -0
  7. {integrate_module-0.99.2 → integrate_module-0.99.3}/integrate/__init__.py +0 -0
  8. {integrate_module-0.99.2 → integrate_module-0.99.3}/integrate/gex.py +0 -0
  9. {integrate_module-0.99.2 → integrate_module-0.99.3}/integrate/integrate.py +0 -0
  10. {integrate_module-0.99.2 → integrate_module-0.99.3}/integrate/integrate_borehole.py +0 -0
  11. {integrate_module-0.99.2 → integrate_module-0.99.3}/integrate/integrate_hdf5_info_cli.py +0 -0
  12. {integrate_module-0.99.2 → integrate_module-0.99.3}/integrate/integrate_plot.py +0 -0
  13. {integrate_module-0.99.2 → integrate_module-0.99.3}/integrate/integrate_query.py +0 -0
  14. {integrate_module-0.99.2 → integrate_module-0.99.3}/integrate/integrate_rejection.py +0 -0
  15. {integrate_module-0.99.2 → integrate_module-0.99.3}/integrate/integrate_rejection_cli.py +0 -0
  16. {integrate_module-0.99.2 → integrate_module-0.99.3}/integrate/integrate_rejection_jax.py +0 -0
  17. {integrate_module-0.99.2 → integrate_module-0.99.3}/integrate/integrate_timing_cli.py +0 -0
  18. {integrate_module-0.99.2 → integrate_module-0.99.3}/integrate/integrate_www_cli.py +0 -0
  19. {integrate_module-0.99.2 → integrate_module-0.99.3}/integrate_module.egg-info/SOURCES.txt +0 -0
  20. {integrate_module-0.99.2 → integrate_module-0.99.3}/integrate_module.egg-info/dependency_links.txt +0 -0
  21. {integrate_module-0.99.2 → integrate_module-0.99.3}/integrate_module.egg-info/entry_points.txt +0 -0
  22. {integrate_module-0.99.2 → integrate_module-0.99.3}/integrate_module.egg-info/requires.txt +0 -0
  23. {integrate_module-0.99.2 → integrate_module-0.99.3}/integrate_module.egg-info/top_level.txt +0 -0
  24. {integrate_module-0.99.2 → integrate_module-0.99.3}/setup.cfg +0 -0
  25. {integrate_module-0.99.2 → integrate_module-0.99.3}/tests/test_likelihood_multinomial.py +0 -0
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: integrate_module
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- Version: 0.99.2
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+ Version: 0.99.3
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  Summary: Localized probabilistic data integration
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  Author-email: Thomas Mejer Hansen <tmeha@geo.au.dk>
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  License: MIT
@@ -2967,6 +2967,10 @@ def get_case_data(case='DAUGAARD', loadAll=False, loadType='', filelist=None, **
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  print("filelist to download:")
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  print(filelist)
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+ # Direct-download endpoint for the shared data. Use ERDA's 'share_redirect'
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+ # form (serves raw file bytes, returns proper 404s), NOT the 'sharelink'
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+ # browse link, which returns an HTML directory page with status 200 for any
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+ # path and would be saved as a corrupt file.
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  urlErda = 'https://anon.erda.au.dk/share_redirect/dxOLKDtoul'
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  urlErdaCase = '%s/%s' % (urlErda,case)
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  from tqdm import tqdm
@@ -2976,7 +2980,22 @@ def get_case_data(case='DAUGAARD', loadAll=False, loadType='', filelist=None, **
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  if showInfo>-1:
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  print('--> Got data for case: %s' % case)
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- return [f.replace('\\', '/').split('/')[-1] for f in filelist]
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+ # Return the local filename for each requested file, but only if it was
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+ # actually obtained (downloaded or already present locally). download_file
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+ # saves to download_dir='.' using the basename, so we check for that here.
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+ # Files that could not be obtained (e.g. missing on the remote server)
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+ # return an empty string, so callers can test `if len(name) == 0`.
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+ result = []
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+ for f in filelist:
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+ basename = f.replace('\\', '/').split('/')[-1]
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+ if os.path.exists(basename):
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+ result.append(basename)
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+ else:
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+ if showInfo>-1:
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+ print('File %s was not obtained (missing locally and on remote); returning empty string.' % basename)
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+ result.append('')
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+
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+ return result
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@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: integrate_module
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- Version: 0.99.2
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+ Version: 0.99.3
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  Summary: Localized probabilistic data integration
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  Author-email: Thomas Mejer Hansen <tmeha@geo.au.dk>
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  License: MIT
@@ -4,7 +4,7 @@ build-backend = "setuptools.build_meta"
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  [project]
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  name = "integrate_module"
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- version = "0.99.02"
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+ version = "0.99.3"
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  description = "Localized probabilistic data integration"
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  readme = { file = "README.md", content-type = "text/markdown" }
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  requires-python = ">=3.10"