immucellai2 2.1.31__tar.gz → 2.1.32__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {immucellai2-2.1.31 → immucellai2-2.1.32}/PKG-INFO +1 -1
- {immucellai2-2.1.31 → immucellai2-2.1.32}/immucellai2/myclasses.py +4 -10
- {immucellai2-2.1.31 → immucellai2-2.1.32}/immucellai2.egg-info/PKG-INFO +1 -1
- {immucellai2-2.1.31 → immucellai2-2.1.32}/setup.cfg +1 -1
- {immucellai2-2.1.31 → immucellai2-2.1.32}/README.md +0 -0
- {immucellai2-2.1.31 → immucellai2-2.1.32}/immucellai2/Deconvolution.py +0 -0
- {immucellai2-2.1.31 → immucellai2-2.1.32}/immucellai2/Drawplot.py +0 -0
- {immucellai2-2.1.31 → immucellai2-2.1.32}/immucellai2/ObtainCategory.py +0 -0
- {immucellai2-2.1.31 → immucellai2-2.1.32}/immucellai2/PrepareData.py +0 -0
- {immucellai2-2.1.31 → immucellai2-2.1.32}/immucellai2/Time.py +0 -0
- {immucellai2-2.1.31 → immucellai2-2.1.32}/immucellai2/__init__.py +0 -0
- {immucellai2-2.1.31 → immucellai2-2.1.32}/immucellai2/myconfig/Celltype.category +0 -0
- {immucellai2-2.1.31 → immucellai2-2.1.32}/immucellai2/myconfig/MarkerUsedDeconvolution.txt +0 -0
- {immucellai2-2.1.31 → immucellai2-2.1.32}/immucellai2/myconfig/reference_normalCelltypes.txt +0 -0
- {immucellai2-2.1.31 → immucellai2-2.1.32}/immucellai2/myconfig/reference_tumorCelltypes.txt +0 -0
- {immucellai2-2.1.31 → immucellai2-2.1.32}/immucellai2.egg-info/SOURCES.txt +0 -0
- {immucellai2-2.1.31 → immucellai2-2.1.32}/immucellai2.egg-info/dependency_links.txt +0 -0
- {immucellai2-2.1.31 → immucellai2-2.1.32}/immucellai2.egg-info/entry_points.txt +0 -0
- {immucellai2-2.1.31 → immucellai2-2.1.32}/immucellai2.egg-info/requires.txt +0 -0
- {immucellai2-2.1.31 → immucellai2-2.1.32}/immucellai2.egg-info/top_level.txt +0 -0
- {immucellai2-2.1.31 → immucellai2-2.1.32}/pyproject.toml +0 -0
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@@ -99,16 +99,10 @@ class CLASS_FOR_RUNRESULT(object):
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self.EmceeFunction2( McSamplingResultList[sampleii, :, :, :] )
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return NewMcSamplingResultList
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def optimized_calculation(self, FlatSamplingResultOne, nCellType):
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elif FlatSamplingResultOne.shape[1] + 1 == nCellType:
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normalized = FlatSamplingResultOne / row_sums_safe
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last_col = 1 - normalized.sum(axis=1, keepdims=True)
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return numpy.column_stack((normalized, last_col))
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else:
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raise ValueError(f"Dimension mismatch: input {FlatSamplingResultOne.shape[1]} columns, target {nCellType}columns")
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if FlatSamplingResultOne.shape[1] == nCellType:
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return FlatSamplingResultOne / FlatSamplingResultOne.sum(axis=1)[:, None]
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elif FlatSamplingResultOne.shape[1] + 1 == nCellType:
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return numpy.column_stack((FlatSamplingResultOne, 1 - FlatSamplingResultOne.sum(axis=1)))
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def EmceeFunction2(self, FlatSamplingResultList):
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fshape = FlatSamplingResultList.shape
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nCellType = len(self.CellType)
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{immucellai2-2.1.31 → immucellai2-2.1.32}/immucellai2/myconfig/reference_normalCelltypes.txt
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