imagedata 3.7.1__tar.gz → 3.7.2.dev1__tar.gz

{imagedata-3.7.1 → imagedata-3.7.2.dev1}/CHANGELOG.md

@@ -7,6 +7,12 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 
 <!--next-version-placeholder-->
 
+## [v3.7.2-dev1] - 2024-10-23
+* Fixed viewing in jupyter notebook using backend `widget`.
+
+## [v3.7.2-dev0] - 2024-10-10
+* Renamed collections.py to collection.py.
+
 ## [v3.7.1] - 2024-10-10
 * Support python 3.13.
 

{imagedata-3.7.1 → imagedata-3.7.2.dev1}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: imagedata
-Version: 3.7.1
+Version: 3.7.2.dev1
 Summary: Read/write medical image data
 Author-email: Erling Andersen <Erling.Andersen@Helse-Bergen.NO>
 Maintainer-email: Erling Andersen <Erling.Andersen@Helse-Bergen.NO>

imagedata-3.7.2.dev1/VERSION.txt

@@ -0,0 +1 @@
+3.7.2-dev1

{imagedata-3.7.1 → imagedata-3.7.2.dev1}/src/imagedata/__init__.py

@@ -4,7 +4,7 @@ import logging
 from importlib import import_module
 from importlib.metadata import version, entry_points
 from .series import Series
-from .collections import Study, Patient, Cohort
+from .collection import Study, Patient, Cohort
 
 logging.getLogger(__name__).addHandler(logging.NullHandler())
 

{imagedata-3.7.1 → imagedata-3.7.2.dev1}/src/imagedata/image_data.py

@@ -16,7 +16,7 @@ from .formats import find_plugin, NotImageError, input_order_to_dirname_str, sha
 from .readdata import _get_sources
 from .transports import Transport
 from .series import Series
-from .collections import Cohort
+from .collection import Cohort
 
 
 def dump():

{imagedata-3.7.1 → imagedata-3.7.2.dev1}/src/imagedata/series.py

@@ -2824,7 +2824,7 @@ class Series(np.ndarray):
                     _ax = ax
             return _ax
 
-        notebook = mpl.get_backend()[-5:] == 'nbagg'
+        notebook = mpl.get_backend() in ['nbagg', 'widget']
 
         # im2 can be single image or list of images
         images = list()
@@ -2854,7 +2854,7 @@ class Series(np.ndarray):
             raise
         self.viewer.connect()
         plt.tight_layout()
-        plt.show()
+        plt.show(block=True)
         if not notebook:
             self.viewer.disconnect()
 

{imagedata-3.7.1 → imagedata-3.7.2.dev1}/src/imagedata.egg-info/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: imagedata
-Version: 3.7.1
+Version: 3.7.2.dev1
 Summary: Read/write medical image data
 Author-email: Erling Andersen <Erling.Andersen@Helse-Bergen.NO>
 Maintainer-email: Erling Andersen <Erling.Andersen@Helse-Bergen.NO>

{imagedata-3.7.1 → imagedata-3.7.2.dev1}/src/imagedata.egg-info/SOURCES.txt

@@ -227,7 +227,7 @@ src/__init__.py
 src/imagedata/__init__.py
 src/imagedata/axis.py
 src/imagedata/cmdline.py
-src/imagedata/collections.py
+src/imagedata/collection.py
 src/imagedata/header.py
 src/imagedata/image_data.py
 src/imagedata/list_plugins.py

{imagedata-3.7.1 → imagedata-3.7.2.dev1}/tests/test_formats_itk.py

@@ -14,7 +14,7 @@ import argparse
 import src.imagedata.cmdline as cmdline
 import src.imagedata.formats as formats
 from src.imagedata.series import Series
-from src.imagedata.collections import Cohort
+from src.imagedata.collection import Cohort
 from .compare_headers import compare_headers
 
 

{imagedata-3.7.1 → imagedata-3.7.2.dev1}/tests/test_formats_mat.py

@@ -9,7 +9,7 @@ import argparse
 import src.imagedata.cmdline as cmdline
 import src.imagedata.formats as formats
 from src.imagedata.series import Series
-from src.imagedata.collections import Cohort
+from src.imagedata.collection import Cohort
 
 
 def list_files(startpath):

{imagedata-3.7.1 → imagedata-3.7.2.dev1}/tests/test_formats_nifti.py

@@ -12,7 +12,7 @@ import nibabel
 import src.imagedata.cmdline as cmdline
 import src.imagedata.formats as formats
 from src.imagedata.series import Series
-from src.imagedata.collections import Cohort
+from src.imagedata.collection import Cohort
 
 
 class TestWriteNIfTIPlugin(unittest.TestCase):

imagedata-3.7.1/VERSION.txt

@@ -1 +0,0 @@
-3.7.1