iita-python 1.0.2__tar.gz → 1.1__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (23) hide show
  1. {iita_python-1.0.2/iita_python.egg-info → iita_python-1.1}/PKG-INFO +1 -1
  2. {iita_python-1.0.2 → iita_python-1.1}/iita_python/_version.py +3 -3
  3. {iita_python-1.0.2 → iita_python-1.1}/iita_python/dataset.py +14 -1
  4. {iita_python-1.0.2 → iita_python-1.1}/iita_python/quasiorder.py +3 -13
  5. {iita_python-1.0.2 → iita_python-1.1/iita_python.egg-info}/PKG-INFO +1 -1
  6. {iita_python-1.0.2 → iita_python-1.1}/iita_python.egg-info/SOURCES.txt +1 -5
  7. iita_python-1.0.2/test_ipynbs/fit_metrics.ipynb +0 -235
  8. iita_python-1.0.2/test_ipynbs/pisa.csv +0 -340
  9. iita_python-1.0.2/test_ipynbs/quasi-order-gen.ipynb +0 -219
  10. iita_python-1.0.2/test_ipynbs/sim_missing_data.ipynb +0 -176
  11. {iita_python-1.0.2 → iita_python-1.1}/.github/workflows/release.yaml +0 -0
  12. {iita_python-1.0.2 → iita_python-1.1}/.gitignore +0 -0
  13. {iita_python-1.0.2 → iita_python-1.1}/README.md +0 -0
  14. {iita_python-1.0.2 → iita_python-1.1}/iita_python/__init__.py +0 -0
  15. {iita_python-1.0.2 → iita_python-1.1}/iita_python/fit_metrics.py +0 -0
  16. {iita_python-1.0.2 → iita_python-1.1}/iita_python/utils.py +0 -0
  17. {iita_python-1.0.2 → iita_python-1.1}/iita_python.egg-info/dependency_links.txt +0 -0
  18. {iita_python-1.0.2 → iita_python-1.1}/iita_python.egg-info/requires.txt +0 -0
  19. {iita_python-1.0.2 → iita_python-1.1}/iita_python.egg-info/top_level.txt +0 -0
  20. {iita_python-1.0.2 → iita_python-1.1}/pyproject.toml +0 -0
  21. {iita_python-1.0.2 → iita_python-1.1}/setuf.cfg +0 -0
  22. {iita_python-1.0.2 → iita_python-1.1}/setup.cfg +0 -0
  23. {iita_python-1.0.2 → iita_python-1.1}/setup.py +0 -0
{iita_python-1.0.2/iita_python.egg-info → iita_python-1.1}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: iita_python
3
- Version: 1.0.2
3
+ Version: 1.1
4
4
  Summary: IITA algorithm in python
5
5
  Author-email: Aliaksei Badnarchuk <alexejbodnarchuk@gmail.com>
6
6
  Requires-Python: >=3.9
{iita_python-1.0.2 → iita_python-1.1}/iita_python/_version.py RENAMED
@@ -28,7 +28,7 @@ version_tuple: VERSION_TUPLE
28
28
  commit_id: COMMIT_ID
29
29
  __commit_id__: COMMIT_ID
30
30
 
31
- __version__ = version = '1.0.2'
32
- __version_tuple__ = version_tuple = (1, 0, 2)
31
+ __version__ = version = '1.1'
32
+ __version_tuple__ = version_tuple = (1, 1)
33
33
 
34
- __commit_id__ = commit_id = 'g481ee8703'
34
+ __commit_id__ = commit_id = 'g0c3bef126'
{iita_python-1.0.2 → iita_python-1.1}/iita_python/dataset.py RENAMED
@@ -55,7 +55,7 @@ class Dataset():
55
55
  self.ce = pd.DataFrame(0, index=np.arange(self.rp.shape[1]), columns=np.arange(self.rp.shape[1]))
56
56
 
57
57
  for i in range(len(self.rp)):
58
- #for subject i, find all cases where a=0 and b=1 (counterexamples to b->a or a <= b) and increment where they intersect
58
+ #for subject i, increment all cases where a=0 and b=1 (counterexamples to b->a or a <= b)
59
59
  not_a = (self.rp.loc[i] == 0)
60
60
  b = (self.rp.loc[i] == 1)
61
61
  self.ce.loc[not_a, b] += 1
@@ -66,6 +66,12 @@ class Dataset():
66
66
  #for subject i, increment all cases where a=b (examples of equivalence of a and b)
67
67
  row = self.rp.loc[i].to_numpy()
68
68
  self.eqe += np.equal.outer(row, row).astype(int)
69
+
70
+ self.valid_ce_cases = pd.DataFrame(0, index=np.arange(self.rp.shape[1]), columns=np.arange(self.rp.shape[1]))
71
+ for i in range(len(self.rp)):
72
+ #for subject i, increment all cases where neither a nor b are NaN (valid case for counterexamples)
73
+ not_nan = np.logical_not(self.rp.loc[i].isna())
74
+ self.valid_ce_cases += np.outer(not_nan, not_nan).astype(int)
69
75
 
70
76
  def add(self, dataset_to_add: Self):
71
77
  """
@@ -78,5 +84,12 @@ class Dataset():
78
84
  self.rp = pd.concat(self.rp, dataset_to_add.rp)
79
85
  self.ce = self.ce + dataset_to_add.ce
80
86
  self.eqe = self.eqe + dataset_to_add.eqe
87
+
88
+ @property
89
+ def relative_ce(self) -> pd.DataFrame:
90
+ """
91
+ Returns the counterexamples matrix accounting for missing values
92
+ """
93
+ return self.ce / self.valid_ce_cases
81
94
 
82
95
  __iadd__ = add
{iita_python-1.0.2 → iita_python-1.1}/iita_python/quasiorder.py RENAMED
@@ -23,30 +23,20 @@ class QuasiOrder:
23
23
  return edge_list
24
24
 
25
25
  def unfold_examples(
26
- matrix: pd.DataFrame,
27
- relativity: npt.NDArray | None = None,
28
- dtype=np.float32
26
+ matrix: pd.DataFrame
29
27
  ) -> npt.NDArray:
30
28
  """
31
29
  Turns an item/item metric DataFrame into
32
30
  a list of tuples of the form (x, [i, j]), where matrix[i, j] = x.\n
33
- Can input a relativity matrix, then exery x gets divided by relativity[i, j].
34
- This can be used to account for missing values
35
31
  """
36
32
 
37
- dfmatrix = pd.DataFrame(matrix).astype(dtype)
38
-
39
- rel = relativity
40
- if (rel is None):
41
- rel = np.ones(dfmatrix.shape, dtype=int)
42
-
43
- dfmatrix = dfmatrix / rel
33
+ dfmatrix = pd.DataFrame(matrix)
44
34
 
45
35
  n = dfmatrix.shape[0]
46
36
  pos = np.arange(n, dtype=np.int_)
47
37
  i = np.repeat(pos, n)
48
38
  j = np.tile(pos, n)
49
- res = np.array(list(zip(dfmatrix.to_numpy()[i, j], i, j)), dtype=np.int_)
39
+ res = np.array(list(zip(dfmatrix.to_numpy()[i, j], i, j)))
50
40
  return res[res[:, 1] != res[:, 2]]
51
41
 
52
42
  def ind_gen(counterexamples: npt.NDArray, n: int) -> list[QuasiOrder]:
{iita_python-1.0.2 → iita_python-1.1/iita_python.egg-info}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: iita_python
3
- Version: 1.0.2
3
+ Version: 1.1
4
4
  Summary: IITA algorithm in python
5
5
  Author-email: Aliaksei Badnarchuk <alexejbodnarchuk@gmail.com>
6
6
  Requires-Python: >=3.9
{iita_python-1.0.2 → iita_python-1.1}/iita_python.egg-info/SOURCES.txt RENAMED
@@ -14,8 +14,4 @@ iita_python.egg-info/PKG-INFO
14
14
  iita_python.egg-info/SOURCES.txt
15
15
  iita_python.egg-info/dependency_links.txt
16
16
  iita_python.egg-info/requires.txt
17
- iita_python.egg-info/top_level.txt
18
- test_ipynbs/fit_metrics.ipynb
19
- test_ipynbs/pisa.csv
20
- test_ipynbs/quasi-order-gen.ipynb
21
- test_ipynbs/sim_missing_data.ipynb
17
+ iita_python.egg-info/top_level.txt
iita_python-1.0.2/test_ipynbs/fit_metrics.ipynb DELETED
@@ -1,235 +0,0 @@
1
- {
2
- "cells": [
3
- {
4
- "cell_type": "markdown",
5
- "id": "aefc5a77",
6
- "metadata": {
7
- "id": "aefc5a77"
8
- },
9
- "source": [
10
- "# Testing the fit metric calculation on the PISA dataset, comparing to the KST library by Milan Segedinac"
11
- ]
12
- },
13
- {
14
- "cell_type": "markdown",
15
- "source": [
16
- "1. Imporitng both libraries and requirements"
17
- ],
18
- "metadata": {
19
- "id": "dzpt8hYXs7kO"
20
- },
21
- "id": "dzpt8hYXs7kO"
22
- },
23
- {
24
- "cell_type": "code",
25
- "source": [
26
- "!git clone https://github.com/Alexe1900/iita_python.git\n",
27
- "!git clone https://github.com/milansegedinac/kst.git\n",
28
- "!pip install numpy\n",
29
- "!pip install pandas\n",
30
- "import sys\n",
31
- "sys.path.append(\"/content/iita_python\")\n",
32
- "sys.path.append(\"/content/kst\")\n",
33
- "import numpy as np\n",
34
- "import pandas as pd\n",
35
- "import iita_python as test_iita\n",
36
- "import learning_spaces.kst as kst"
37
- ],
38
- "metadata": {
39
- "id": "s4P_gsz7tDlG",
40
- "outputId": "03b37282-44e0-43f1-996e-ba3de8248eab",
41
- "colab": {
42
- "base_uri": "https://localhost:8080/"
43
- }
44
- },
45
- "id": "s4P_gsz7tDlG",
46
- "execution_count": 1,
47
- "outputs": [
48
- {
49
- "output_type": "stream",
50
- "name": "stdout",
51
- "text": [
52
- "fatal: destination path 'iita_python' already exists and is not an empty directory.\n",
53
- "fatal: destination path 'kst' already exists and is not an empty directory.\n",
54
- "Requirement already satisfied: numpy in /usr/local/lib/python3.12/dist-packages (2.0.2)\n",
55
- "Requirement already satisfied: pandas in /usr/local/lib/python3.12/dist-packages (2.2.2)\n",
56
- "Requirement already satisfied: numpy>=1.26.0 in /usr/local/lib/python3.12/dist-packages (from pandas) (2.0.2)\n",
57
- "Requirement already satisfied: python-dateutil>=2.8.2 in /usr/local/lib/python3.12/dist-packages (from pandas) (2.9.0.post0)\n",
58
- "Requirement already satisfied: pytz>=2020.1 in /usr/local/lib/python3.12/dist-packages (from pandas) (2025.2)\n",
59
- "Requirement already satisfied: tzdata>=2022.7 in /usr/local/lib/python3.12/dist-packages (from pandas) (2025.2)\n",
60
- "Requirement already satisfied: six>=1.5 in /usr/local/lib/python3.12/dist-packages (from python-dateutil>=2.8.2->pandas) (1.17.0)\n"
61
- ]
62
- }
63
- ]
64
- },
65
- {
66
- "cell_type": "markdown",
67
- "source": [
68
- "2. Importing the dataset, generating quasi-orders"
69
- ],
70
- "metadata": {
71
- "id": "Wwxr0c_rtSMN"
72
- },
73
- "id": "Wwxr0c_rtSMN"
74
- },
75
- {
76
- "cell_type": "code",
77
- "source": [
78
- "from iita_python.utils import read_rp\n",
79
- "\n",
80
- "data_raw = read_rp(\"iita_python/test_ipynbs/pisa.csv\")\n",
81
- "data = test_iita.Dataset(data_raw)\n",
82
- "\n",
83
- "unfolded_ce = test_iita.unfold_examples(data.counterexamples)\n",
84
- "qos = test_iita.ind_gen(unfolded_ce, data.items)"
85
- ],
86
- "metadata": {
87
- "id": "7CZKj4kktWg6"
88
- },
89
- "id": "7CZKj4kktWg6",
90
- "execution_count": 2,
91
- "outputs": []
92
- },
93
- {
94
- "cell_type": "markdown",
95
- "source": [
96
- "3. Testing the fit metrics"
97
- ],
98
- "metadata": {
99
- "id": "t-RqTjTEuBUo"
100
- },
101
- "id": "t-RqTjTEuBUo"
102
- },
103
- {
104
- "cell_type": "markdown",
105
- "source": [
106
- "3.1. Original IITA fit metric"
107
- ],
108
- "metadata": {
109
- "id": "oXyUJR12jT22"
110
- },
111
- "id": "oXyUJR12jT22"
112
- },
113
- {
114
- "cell_type": "code",
115
- "source": [
116
- "import iita_python.fit_metrics as test_fit\n",
117
- "corrects = kst.iita(data.response_patterns, 3)['diff']\n",
118
- "\n",
119
- "for i, qo in enumerate(qos):\n",
120
- " test_metric = round(test_fit.orig_iita_fit(data, qo), 3)\n",
121
- " corr_metric = round(corrects[i], 3)\n",
122
- "\n",
123
- " try:\n",
124
- " assert (test_metric == corr_metric)\n",
125
- " print(f'Fit metric {i}/{len(qos)} correct ✅')\n",
126
- " except AssertionError:\n",
127
- " print(f'Fit metric {i}/{len(qos)} incorrect ❌')\n",
128
- " print(f'Test: {test_metric}')\n",
129
- " print(f'Correct: {corr_metric}')"
130
- ],
131
- "metadata": {
132
- "id": "a5IvxR1I7-BG",
133
- "outputId": "abc3c1be-79b3-4721-9c7c-a6e0e6669ba7",
134
- "colab": {
135
- "base_uri": "https://localhost:8080/"
136
- }
137
- },
138
- "id": "a5IvxR1I7-BG",
139
- "execution_count": 8,
140
- "outputs": [
141
- {
142
- "output_type": "stream",
143
- "name": "stdout",
144
- "text": [
145
- "Fit metric 0/13 correct ✅\n",
146
- "Fit metric 1/13 correct ✅\n",
147
- "Fit metric 2/13 correct ✅\n",
148
- "Fit metric 3/13 correct ✅\n",
149
- "Fit metric 4/13 correct ✅\n",
150
- "Fit metric 5/13 correct ✅\n",
151
- "Fit metric 6/13 correct ✅\n",
152
- "Fit metric 7/13 correct ✅\n",
153
- "Fit metric 8/13 correct ✅\n",
154
- "Fit metric 9/13 correct ✅\n",
155
- "Fit metric 10/13 correct ✅\n",
156
- "Fit metric 11/13 correct ✅\n",
157
- "Fit metric 12/13 correct ✅\n"
158
- ]
159
- }
160
- ]
161
- },
162
- {
163
- "cell_type": "markdown",
164
- "source": [
165
- "3.2. Corrected fit metric"
166
- ],
167
- "metadata": {
168
- "id": "VIPtCas5jXP3"
169
- },
170
- "id": "VIPtCas5jXP3"
171
- },
172
- {
173
- "cell_type": "code",
174
- "source": [
175
- "corrects = kst.iita(data.response_patterns, 2)['diff']\n",
176
- "\n",
177
- "for i, qo in enumerate(qos):\n",
178
- " test_metric = round(test_fit.corr_iita_fit(data, qo), 3)\n",
179
- " corr_metric = round(corrects[i], 3)\n",
180
- "\n",
181
- " try:\n",
182
- " assert (test_metric == corr_metric)\n",
183
- " print(f'Fit metric {i}/{len(qos)} correct ✅')\n",
184
- " except AssertionError:\n",
185
- " print(f'Fit metric {i}/{len(qos)} incorrect ❌')\n",
186
- " print(f'Test: {test_metric}')\n",
187
- " print(f'Correct: {corr_metric}')"
188
- ],
189
- "metadata": {
190
- "id": "j1LoyigWjc5t",
191
- "outputId": "bd2ca738-1a94-4ce8-b507-325a1acdf9e1",
192
- "colab": {
193
- "base_uri": "https://localhost:8080/"
194
- }
195
- },
196
- "id": "j1LoyigWjc5t",
197
- "execution_count": 9,
198
- "outputs": [
199
- {
200
- "output_type": "stream",
201
- "name": "stdout",
202
- "text": [
203
- "Fit metric 0/13 correct ✅\n",
204
- "Fit metric 1/13 correct ✅\n",
205
- "Fit metric 2/13 correct ✅\n",
206
- "Fit metric 3/13 correct ✅\n",
207
- "Fit metric 4/13 correct ✅\n",
208
- "Fit metric 5/13 correct ✅\n",
209
- "Fit metric 6/13 correct ✅\n",
210
- "Fit metric 7/13 correct ✅\n",
211
- "Fit metric 8/13 correct ✅\n",
212
- "Fit metric 9/13 correct ✅\n",
213
- "Fit metric 10/13 correct ✅\n",
214
- "Fit metric 11/13 correct ✅\n",
215
- "Fit metric 12/13 correct ✅\n"
216
- ]
217
- }
218
- ]
219
- }
220
- ],
221
- "metadata": {
222
- "language_info": {
223
- "name": "python"
224
- },
225
- "colab": {
226
- "provenance": []
227
- },
228
- "kernelspec": {
229
- "name": "python3",
230
- "display_name": "Python 3"
231
- }
232
- },
233
- "nbformat": 4,
234
- "nbformat_minor": 5
235
- }
iita_python-1.0.2/test_ipynbs/pisa.csv DELETED
@@ -1,340 +0,0 @@
1
- 1,0,0,0,0
2
- 0,0,0,0,0
3
- 1,0,0,0,0
4
- 1,0,0,0,0
5
- 0,1,0,0,0
6
- 1,1,0,0,0
7
- 0,0,0,0,0
8
- 1,1,0,0,1
9
- 1,1,0,0,0
10
- 1,1,0,0,0
11
- 1,0,0,0,0
12
- 1,1,0,0,0
13
- 0,0,0,0,0
14
- 1,0,0,0,0
15
- 1,0,0,0,0
16
- 1,0,0,0,0
17
- 0,0,0,0,0
18
- 1,1,0,0,0
19
- 1,1,0,0,0
20
- 0,0,0,0,0
21
- 1,0,0,0,0
22
- 1,0,0,0,0
23
- 1,1,0,0,0
24
- 1,0,0,0,0
25
- 0,1,0,0,0
26
- 1,1,0,0,0
27
- 1,0,0,0,0
28
- 1,0,0,0,0
29
- 0,0,0,0,0
30
- 1,0,0,0,0
31
- 0,1,0,1,0
32
- 1,0,0,0,0
33
- 1,1,0,0,0
34
- 1,1,0,1,0
35
- 1,1,0,0,0
36
- 1,1,0,0,0
37
- 1,1,0,0,0
38
- 1,1,0,0,1
39
- 1,0,0,0,0
40
- 1,1,0,0,0
41
- 1,1,0,0,0
42
- 1,0,0,0,0
43
- 1,1,0,0,0
44
- 1,0,0,0,0
45
- 1,1,0,0,0
46
- 1,1,0,0,0
47
- 1,1,0,1,0
48
- 1,1,0,0,0
49
- 1,1,0,1,0
50
- 1,1,0,0,1
51
- 1,1,0,0,0
52
- 1,0,0,0,0
53
- 1,1,0,0,0
54
- 1,1,0,0,1
55
- 1,1,0,0,0
56
- 1,1,0,0,0
57
- 1,0,0,0,1
58
- 1,0,0,0,0
59
- 1,1,0,0,0
60
- 1,0,0,0,0
61
- 1,0,0,0,0
62
- 1,1,0,0,0
63
- 1,1,0,0,0
64
- 1,0,0,0,0
65
- 1,1,0,0,0
66
- 1,1,0,0,0
67
- 1,1,0,0,0
68
- 1,1,0,0,1
69
- 1,1,0,0,0
70
- 0,0,0,0,0
71
- 1,1,0,1,0
72
- 1,1,0,1,0
73
- 1,1,0,1,0
74
- 1,1,0,0,0
75
- 1,1,0,0,0
76
- 1,0,0,0,1
77
- 1,0,0,0,0
78
- 1,1,0,0,0
79
- 1,1,0,1,0
80
- 1,0,0,0,0
81
- 0,0,0,0,0
82
- 1,1,0,0,0
83
- 1,1,0,0,0
84
- 1,0,0,0,0
85
- 1,1,0,0,0
86
- 1,1,0,0,0
87
- 1,1,0,0,0
88
- 1,0,0,0,0
89
- 1,0,0,0,1
90
- 1,1,0,0,0
91
- 1,1,0,0,0
92
- 1,1,0,1,0
93
- 1,1,0,0,1
94
- 1,1,0,0,0
95
- 1,0,0,0,0
96
- 1,0,0,0,0
97
- 1,1,0,0,0
98
- 1,1,0,0,0
99
- 1,1,0,1,0
100
- 1,1,0,0,0
101
- 1,1,0,0,1
102
- 1,1,0,0,0
103
- 1,1,0,0,0
104
- 1,1,0,0,0
105
- 1,1,0,1,0
106
- 1,1,0,0,0
107
- 1,1,0,0,0
108
- 1,0,0,0,0
109
- 1,1,0,0,0
110
- 1,1,0,0,1
111
- 1,1,0,1,0
112
- 1,1,0,1,0
113
- 1,1,0,0,1
114
- 1,1,0,1,0
115
- 1,1,0,1,0
116
- 1,0,0,0,0
117
- 1,1,0,1,0
118
- 1,0,0,0,0
119
- 0,1,0,0,0
120
- 1,1,0,0,1
121
- 1,1,0,0,0
122
- 1,1,0,0,0
123
- 1,1,0,0,0
124
- 0,0,0,1,0
125
- 0,0,0,0,0
126
- 1,0,0,0,0
127
- 1,0,0,0,0
128
- 0,0,0,0,0
129
- 0,1,0,0,0
130
- 0,0,0,0,0
131
- 1,0,0,0,0
132
- 0,1,0,0,0
133
- 1,1,0,0,0
134
- 0,0,0,0,0
135
- 1,1,0,0,0
136
- 1,1,0,0,0
137
- 1,0,0,1,0
138
- 0,0,0,0,0
139
- 0,1,0,0,0
140
- 0,1,0,0,0
141
- 1,1,0,0,0
142
- 1,0,0,0,0
143
- 1,1,0,0,0
144
- 1,1,0,0,0
145
- 1,0,0,0,0
146
- 0,1,0,0,1
147
- 1,1,0,0,0
148
- 1,1,0,1,0
149
- 1,0,0,0,0
150
- 0,1,0,0,1
151
- 1,0,0,0,0
152
- 1,1,0,0,0
153
- 0,0,0,0,0
154
- 0,0,0,0,0
155
- 1,1,0,0,0
156
- 0,1,0,0,0
157
- 0,0,0,0,0
158
- 0,0,0,0,0
159
- 0,0,0,0,0
160
- 1,0,0,0,0
161
- 0,1,1,0,0
162
- 1,1,1,0,0
163
- 1,0,1,0,0
164
- 1,1,1,0,0
165
- 0,1,1,1,0
166
- 1,1,1,1,0
167
- 1,1,1,1,1
168
- 1,1,1,0,0
169
- 0,0,1,0,0
170
- 1,1,1,1,1
171
- 1,1,1,0,0
172
- 1,1,1,1,0
173
- 1,1,1,0,0
174
- 1,1,1,0,0
175
- 1,1,1,0,1
176
- 1,0,1,0,0
177
- 0,1,1,0,0
178
- 1,0,1,0,0
179
- 1,1,1,1,0
180
- 1,1,1,0,0
181
- 1,1,1,0,0
182
- 1,1,1,0,0
183
- 1,1,1,0,0
184
- 1,1,1,0,0
185
- 1,1,1,0,0
186
- 1,1,1,0,0
187
- 1,1,1,0,1
188
- 1,0,1,0,0
189
- 0,1,1,0,0
190
- 1,0,1,1,0
191
- 1,1,1,1,0
192
- 1,1,1,0,0
193
- 1,1,1,1,0
194
- 1,0,1,0,0
195
- 1,1,1,0,0
196
- 1,1,1,0,1
197
- 1,0,1,0,0
198
- 1,1,1,0,0
199
- 1,1,1,0,1
200
- 1,1,1,0,1
201
- 1,1,1,0,0
202
- 1,0,1,1,1
203
- 1,1,1,0,0
204
- 1,1,1,1,1
205
- 1,1,1,0,0
206
- 0,1,1,0,0
207
- 0,1,1,0,0
208
- 0,1,1,0,0
209
- 1,1,1,1,0
210
- 1,1,1,0,0
211
- 1,0,1,0,0
212
- 1,0,1,0,1
213
- 1,1,1,0,1
214
- 1,1,1,0,0
215
- 1,1,1,1,0
216
- 1,1,1,0,0
217
- 1,1,1,1,0
218
- 1,0,1,0,0
219
- 1,1,1,0,0
220
- 0,1,1,0,0
221
- 1,1,1,1,1
222
- 1,1,1,0,0
223
- 1,1,1,1,0
224
- 1,1,1,1,0
225
- 1,0,1,1,0
226
- 1,1,1,0,1
227
- 1,1,1,0,0
228
- 1,1,1,1,0
229
- 1,1,1,0,0
230
- 1,1,1,0,0
231
- 1,1,1,1,0
232
- 1,1,1,0,0
233
- 1,1,1,1,0
234
- 1,1,1,0,0
235
- 1,0,1,1,0
236
- 1,1,1,1,1
237
- 1,1,1,0,0
238
- 1,1,1,1,0
239
- 1,1,1,1,0
240
- 1,1,1,1,0
241
- 1,1,1,1,0
242
- 1,1,1,0,0
243
- 1,1,1,0,0
244
- 1,1,1,1,0
245
- 1,1,1,1,0
246
- 1,1,1,1,1
247
- 1,1,1,0,0
248
- 1,1,1,1,0
249
- 1,1,1,1,1
250
- 1,1,1,0,0
251
- 1,1,1,0,0
252
- 1,1,1,0,0
253
- 1,1,1,0,0
254
- 1,1,1,0,0
255
- 1,1,1,0,1
256
- 1,0,1,1,0
257
- 1,1,1,0,0
258
- 1,1,1,1,1
259
- 1,1,1,0,0
260
- 1,1,1,0,0
261
- 1,1,1,0,0
262
- 1,1,1,0,0
263
- 1,1,1,0,1
264
- 1,1,1,1,1
265
- 0,1,1,0,1
266
- 1,1,1,0,1
267
- 1,0,1,0,0
268
- 1,1,1,0,1
269
- 1,1,1,0,1
270
- 1,1,1,0,0
271
- 1,1,1,0,1
272
- 1,1,1,0,1
273
- 1,1,1,1,0
274
- 1,1,1,1,0
275
- 1,1,1,1,0
276
- 1,1,1,1,0
277
- 0,1,1,0,0
278
- 1,1,1,0,0
279
- 0,1,1,1,0
280
- 1,1,1,1,0
281
- 1,1,1,1,0
282
- 1,1,1,0,0
283
- 1,1,1,1,1
284
- 1,1,1,1,0
285
- 1,1,1,0,0
286
- 1,1,1,0,0
287
- 1,1,1,0,1
288
- 1,1,1,1,0
289
- 1,1,1,0,0
290
- 1,1,1,0,1
291
- 1,1,1,0,0
292
- 1,1,1,1,0
293
- 1,1,1,0,1
294
- 1,1,1,1,1
295
- 1,1,1,0,0
296
- 1,1,1,1,0
297
- 1,1,1,1,1
298
- 1,1,1,1,0
299
- 1,1,1,1,0
300
- 1,1,1,1,0
301
- 1,1,1,1,0
302
- 1,1,1,1,0
303
- 1,1,1,0,0
304
- 1,1,1,0,0
305
- 1,1,1,1,0
306
- 1,1,1,0,0
307
- 1,1,1,0,0
308
- 1,1,1,1,0
309
- 1,1,1,1,0
310
- 1,1,1,1,0
311
- 1,1,1,0,0
312
- 1,0,1,0,0
313
- 1,1,1,0,0
314
- 1,0,1,0,0
315
- 0,0,1,0,0
316
- 1,0,1,0,0
317
- 1,1,1,0,0
318
- 1,1,1,0,0
319
- 1,1,1,0,0
320
- 1,0,1,0,0
321
- 1,1,1,0,0
322
- 1,1,1,0,0
323
- 1,1,1,0,0
324
- 1,1,1,0,0
325
- 1,1,1,0,0
326
- 1,1,1,0,0
327
- 1,1,1,1,0
328
- 0,1,1,0,0
329
- 1,0,1,1,0
330
- 1,1,1,0,0
331
- 1,0,1,0,0
332
- 0,0,1,0,0
333
- 0,0,1,0,0
334
- 0,1,0,0,0
335
- 0,1,0,0,0
336
- 0,1,0,0,0
337
- 1,0,0,0,0
338
- 1,0,0,0,0
339
- 0,0,0,0,0
340
- 0,0,0,0,0
iita_python-1.0.2/test_ipynbs/quasi-order-gen.ipynb DELETED
@@ -1,219 +0,0 @@
1
- {
2
- "cells": [
3
- {
4
- "cell_type": "markdown",
5
- "metadata": {
6
- "id": "cw9gSDCONN4s"
7
- },
8
- "source": [
9
- "# Testing the quasi-order generation on the PISA dataset, comparing to the KST library by Milan Segedinac"
10
- ]
11
- },
12
- {
13
- "cell_type": "markdown",
14
- "metadata": {
15
- "id": "gH1gF08aNy22"
16
- },
17
- "source": [
18
- "1. Importing both libraries and requirements"
19
- ]
20
- },
21
- {
22
- "cell_type": "code",
23
- "execution_count": null,
24
- "metadata": {
25
- "colab": {
26
- "base_uri": "https://localhost:8080/"
27
- },
28
- "id": "bvA-pXFUN36a",
29
- "outputId": "fefbb9ca-5eb1-41ec-da36-fc31f7de1093"
30
- },
31
- "outputs": [
32
- {
33
- "name": "stdout",
34
- "output_type": "stream",
35
- "text": [
36
- "fatal: destination path 'iita_python' already exists and is not an empty directory.\n",
37
- "fatal: destination path 'kst' already exists and is not an empty directory.\n",
38
- "Requirement already satisfied: numpy in /usr/local/lib/python3.12/dist-packages (2.0.2)\n",
39
- "Requirement already satisfied: pandas in /usr/local/lib/python3.12/dist-packages (2.2.2)\n",
40
- "Requirement already satisfied: numpy>=1.26.0 in /usr/local/lib/python3.12/dist-packages (from pandas) (2.0.2)\n",
41
- "Requirement already satisfied: python-dateutil>=2.8.2 in /usr/local/lib/python3.12/dist-packages (from pandas) (2.9.0.post0)\n",
42
- "Requirement already satisfied: pytz>=2020.1 in /usr/local/lib/python3.12/dist-packages (from pandas) (2025.2)\n",
43
- "Requirement already satisfied: tzdata>=2022.7 in /usr/local/lib/python3.12/dist-packages (from pandas) (2025.2)\n",
44
- "Requirement already satisfied: six>=1.5 in /usr/local/lib/python3.12/dist-packages (from python-dateutil>=2.8.2->pandas) (1.17.0)\n"
45
- ]
46
- }
47
- ],
48
- "source": [
49
- "!git clone https://github.com/Alexe1900/iita_python.git\n",
50
- "!git clone https://github.com/milansegedinac/kst.git\n",
51
- "!pip install numpy\n",
52
- "!pip install pandas\n",
53
- "import sys\n",
54
- "sys.path.append(\"/content/iita_python\")\n",
55
- "sys.path.append(\"/content/kst\")\n",
56
- "import numpy as np\n",
57
- "import pandas as pd\n",
58
- "import iita_python as iita\n",
59
- "import learning_spaces.kst as kst"
60
- ]
61
- },
62
- {
63
- "cell_type": "markdown",
64
- "metadata": {
65
- "id": "CwlVMK3MO3QJ"
66
- },
67
- "source": [
68
- "2. Importing the dataset"
69
- ]
70
- },
71
- {
72
- "cell_type": "code",
73
- "execution_count": 3,
74
- "metadata": {
75
- "colab": {
76
- "base_uri": "https://localhost:8080/"
77
- },
78
- "id": "FvSAv-4cOWQp",
79
- "outputId": "4d1adf29-3d0c-40cf-d79d-9a8df3d9f945"
80
- },
81
- "outputs": [
82
- {
83
- "name": "stdout",
84
- "output_type": "stream",
85
- "text": [
86
- "Data imported successfully ✅\n"
87
- ]
88
- }
89
- ],
90
- "source": [
91
- "from iita_python.utils import read_rp\n",
92
- "\n",
93
- "data_raw = read_rp(\"iita_python/test_ipynbs/pisa.csv\")\n",
94
- "assert not data_raw.empty\n",
95
- "print(\"Data imported successfully ✅\")"
96
- ]
97
- },
98
- {
99
- "cell_type": "markdown",
100
- "metadata": {
101
- "id": "UVRNzocZTCZC"
102
- },
103
- "source": [
104
- "3. Counting the counterexamples"
105
- ]
106
- },
107
- {
108
- "cell_type": "code",
109
- "execution_count": 6,
110
- "metadata": {
111
- "colab": {
112
- "base_uri": "https://localhost:8080/"
113
- },
114
- "id": "lWysv1UsTGPf",
115
- "outputId": "d24fc04a-e60d-45c6-ce95-c77f859df45e"
116
- },
117
- "outputs": [
118
- {
119
- "name": "stdout",
120
- "output_type": "stream",
121
- "text": [
122
- "Counterexamples computed correctly ✅\n"
123
- ]
124
- }
125
- ],
126
- "source": [
127
- "data = iita.Dataset(data_raw)\n",
128
- "\n",
129
- "correct_ce = kst.ob_counter(data_raw)\n",
130
- "\n",
131
- "try:\n",
132
- " assert (correct_ce == data.counterexamples.to_numpy()).all()\n",
133
- " print(\"Counterexamples computed correctly ✅\")\n",
134
- "except AssertionError:\n",
135
- " print(\"Counterexamples computed incorrectly ❌\")\n"
136
- ]
137
- },
138
- {
139
- "cell_type": "markdown",
140
- "metadata": {
141
- "id": "H7X3tEf7bGdt"
142
- },
143
- "source": [
144
- "4. Generating the quasi-orders"
145
- ]
146
- },
147
- {
148
- "cell_type": "code",
149
- "execution_count": null,
150
- "metadata": {
151
- "colab": {
152
- "base_uri": "https://localhost:8080/"
153
- },
154
- "id": "Ywvri9o8bGA0",
155
- "outputId": "438b2adf-3bb1-4784-cab7-ff32228d5eab"
156
- },
157
- "outputs": [
158
- {
159
- "name": "stdout",
160
- "output_type": "stream",
161
- "text": [
162
- "Correct number of quasi-orders ✅\n",
163
- "Quasi-order 0/13 correct ✅\n",
164
- "Quasi-order 1/13 correct ✅\n",
165
- "Quasi-order 2/13 correct ✅\n",
166
- "Quasi-order 3/13 correct ✅\n",
167
- "Quasi-order 4/13 correct ✅\n",
168
- "Quasi-order 5/13 correct ✅\n",
169
- "Quasi-order 6/13 correct ✅\n",
170
- "Quasi-order 7/13 correct ✅\n",
171
- "Quasi-order 8/13 correct ✅\n",
172
- "Quasi-order 9/13 correct ✅\n",
173
- "Quasi-order 10/13 correct ✅\n",
174
- "Quasi-order 11/13 correct ✅\n",
175
- "Quasi-order 12/13 correct ✅\n"
176
- ]
177
- }
178
- ],
179
- "source": [
180
- "correct_qos = kst.ind_gen(correct_ce)\n",
181
- "\n",
182
- "unfolded_ce = iita.unfold_examples(data.counterexamples)\n",
183
- "test_qos = iita.ind_gen(unfolded_ce, data.items)\n",
184
- "test_qos = [sorted([(int(a), int(b)) for a, b in qo.get_edge_list()]) for qo in test_qos]\n",
185
- "\n",
186
- "try:\n",
187
- " assert len(correct_qos) == len(test_qos)\n",
188
- " print(f'Correct number of quasi-orders ✅')\n",
189
- "except AssertionError:\n",
190
- " print(f'Wrong number of quasi-orders ❌')\n",
191
- " quit()\n",
192
- "\n",
193
- "for i, (corr_qo, test_qo) in enumerate(zip(correct_qos, test_qos)):\n",
194
- " corr_qo = sorted(corr_qo)\n",
195
- " try:\n",
196
- " assert corr_qo == test_qo\n",
197
- " print(f'Quasi-order {i}/{len(correct_qos)} correct ✅')\n",
198
- " except AssertionError:\n",
199
- " print(f'Quasi-order {i}/{len(correct_qos)} incorrect ❌')\n",
200
- " print(f'Test: {test_qo}')\n",
201
- " print(f'Correct: {corr_qo}')"
202
- ]
203
- }
204
- ],
205
- "metadata": {
206
- "colab": {
207
- "provenance": []
208
- },
209
- "kernelspec": {
210
- "display_name": "Python 3",
211
- "name": "python3"
212
- },
213
- "language_info": {
214
- "name": "python"
215
- }
216
- },
217
- "nbformat": 4,
218
- "nbformat_minor": 0
219
- }
iita_python-1.0.2/test_ipynbs/sim_missing_data.ipynb DELETED
@@ -1,176 +0,0 @@
1
- {
2
- "cells": [
3
- {
4
- "cell_type": "markdown",
5
- "id": "c534cd3f",
6
- "metadata": {
7
- "id": "c534cd3f"
8
- },
9
- "source": [
10
- "# Testing on PISA dataset with randomized missing data"
11
- ]
12
- },
13
- {
14
- "cell_type": "markdown",
15
- "source": [
16
- "1. Importing package and dataset"
17
- ],
18
- "metadata": {
19
- "id": "1nLTjppYSRTe"
20
- },
21
- "id": "1nLTjppYSRTe"
22
- },
23
- {
24
- "cell_type": "code",
25
- "source": [
26
- "!pip install iita_python\n",
27
- "!git clone https://gist.github.com/717f0147675b0c8ed25e50d583c943bf.git\n",
28
- "\n",
29
- "import numpy as np\n",
30
- "import iita_python as iita\n",
31
- "import iita_python.fit_metrics as iita_fm\n",
32
- "from iita_python.utils import read_rp\n",
33
- "from random import randint\n",
34
- "\n",
35
- "data = read_rp('./717f0147675b0c8ed25e50d583c943bf/pisa.csv')"
36
- ],
37
- "metadata": {
38
- "id": "SlEiX6B1SSsU",
39
- "outputId": "55bf001f-aba5-493c-a3a6-77da399684c0",
40
- "colab": {
41
- "base_uri": "https://localhost:8080/"
42
- }
43
- },
44
- "id": "SlEiX6B1SSsU",
45
- "execution_count": 8,
46
- "outputs": [
47
- {
48
- "output_type": "stream",
49
- "name": "stdout",
50
- "text": [
51
- "Requirement already satisfied: iita_python in /usr/local/lib/python3.12/dist-packages (0.0.post42)\n",
52
- "Requirement already satisfied: numpy in /usr/local/lib/python3.12/dist-packages (from iita_python) (2.0.2)\n",
53
- "Requirement already satisfied: pandas in /usr/local/lib/python3.12/dist-packages (from iita_python) (2.2.2)\n",
54
- "Requirement already satisfied: python-dateutil>=2.8.2 in /usr/local/lib/python3.12/dist-packages (from pandas->iita_python) (2.9.0.post0)\n",
55
- "Requirement already satisfied: pytz>=2020.1 in /usr/local/lib/python3.12/dist-packages (from pandas->iita_python) (2025.2)\n",
56
- "Requirement already satisfied: tzdata>=2022.7 in /usr/local/lib/python3.12/dist-packages (from pandas->iita_python) (2025.2)\n",
57
- "Requirement already satisfied: six>=1.5 in /usr/local/lib/python3.12/dist-packages (from python-dateutil>=2.8.2->pandas->iita_python) (1.17.0)\n",
58
- "fatal: destination path '717f0147675b0c8ed25e50d583c943bf' already exists and is not an empty directory.\n"
59
- ]
60
- }
61
- ]
62
- },
63
- {
64
- "cell_type": "markdown",
65
- "source": [
66
- "2. Testing function"
67
- ],
68
- "metadata": {
69
- "id": "jlvoh1yOata0"
70
- },
71
- "id": "jlvoh1yOata0"
72
- },
73
- {
74
- "cell_type": "code",
75
- "source": [
76
- "def test(metric):\n",
77
- " correct = True\n",
78
- " correct_qo = None\n",
79
- " correct_count = 0\n",
80
- "\n",
81
- " while (correct and correct_count < data.shape[0]*data.shape[1]):\n",
82
- " print(f'doing {correct_count}')\n",
83
- " test_dataset = iita.Dataset(data)\n",
84
- " unfolded_ce = iita.unfold_examples(test_dataset.ce)\n",
85
- " qos = iita.ind_gen(unfolded_ce, test_dataset.items)\n",
86
- "\n",
87
- " best_qo_id = -1\n",
88
- " best_qo_diff = float('inf')\n",
89
- " for i, qo in enumerate(qos):\n",
90
- " qo_diff = metric(test_dataset, qo)\n",
91
- " if (qo_diff < best_qo_diff):\n",
92
- " best_qo_diff = qo_diff\n",
93
- " best_qo_id = i\n",
94
- "\n",
95
- " best_qo = sorted([(int(a), int(b)) for a, b in qos[best_qo_id].get_edge_list()])\n",
96
- " if (correct_qo is None):\n",
97
- " correct_count += 1\n",
98
- " correct_qo = best_qo\n",
99
- " elif (best_qo != correct_qo):\n",
100
- " correct = False\n",
101
- " else:\n",
102
- " correct_count += 1\n",
103
- "\n",
104
- " while (True):\n",
105
- " a = randint(0, test_dataset.items - 1)\n",
106
- " b = randint(0, test_dataset.subjects - 1)\n",
107
- " if (not np.isnan(data[a][b])):\n",
108
- " break;\n",
109
- " data.loc[b, a] = np.nan\n",
110
- "\n",
111
- " return correct_count"
112
- ],
113
- "metadata": {
114
- "id": "ok9yLOnsTOU7"
115
- },
116
- "id": "ok9yLOnsTOU7",
117
- "execution_count": 21,
118
- "outputs": []
119
- },
120
- {
121
- "cell_type": "code",
122
- "source": [
123
- "res = test(iita_fm.orig_iita_fit)"
124
- ],
125
- "metadata": {
126
- "id": "giLvbXdtX4uc"
127
- },
128
- "id": "giLvbXdtX4uc",
129
- "execution_count": null,
130
- "outputs": []
131
- },
132
- {
133
- "cell_type": "code",
134
- "source": [
135
- "res"
136
- ],
137
- "metadata": {
138
- "id": "N2K347pebF9u",
139
- "outputId": "b603f637-7b16-4161-eb18-4cf5ea12d989",
140
- "colab": {
141
- "base_uri": "https://localhost:8080/"
142
- }
143
- },
144
- "id": "N2K347pebF9u",
145
- "execution_count": 23,
146
- "outputs": [
147
- {
148
- "output_type": "execute_result",
149
- "data": {
150
- "text/plain": [
151
- "525"
152
- ]
153
- },
154
- "metadata": {},
155
- "execution_count": 23
156
- }
157
- ]
158
- }
159
- ],
160
- "metadata": {
161
- "kernelspec": {
162
- "display_name": "iita",
163
- "language": "python",
164
- "name": "python3"
165
- },
166
- "language_info": {
167
- "name": "python",
168
- "version": "3.12.11"
169
- },
170
- "colab": {
171
- "provenance": []
172
- }
173
- },
174
- "nbformat": 4,
175
- "nbformat_minor": 5
176
- }
{iita_python-1.0.2 → iita_python-1.1}/.gitignore RENAMED
File without changes
{iita_python-1.0.2 → iita_python-1.1}/README.md RENAMED
File without changes
{iita_python-1.0.2 → iita_python-1.1}/pyproject.toml RENAMED
File without changes
{iita_python-1.0.2 → iita_python-1.1}/setuf.cfg RENAMED
File without changes
{iita_python-1.0.2 → iita_python-1.1}/setup.cfg RENAMED
File without changes
{iita_python-1.0.2 → iita_python-1.1}/setup.py RENAMED
File without changes