iints-sdk-python35 0.1.12__tar.gz → 0.1.13__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {iints_sdk_python35-0.1.12/src/iints_sdk_python35.egg-info → iints_sdk_python35-0.1.13}/PKG-INFO +26 -1
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/README.md +23 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/pyproject.toml +4 -1
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/__init__.py +12 -2
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/cli/cli.py +430 -5
- iints_sdk_python35-0.1.13/src/iints/core/safety/__init__.py +5 -0
- iints_sdk_python35-0.1.13/src/iints/core/safety/config.py +29 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/core/safety/input_validator.py +9 -1
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/core/safety/supervisor.py +8 -4
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/core/simulator.py +9 -3
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/core/supervisor.py +15 -1
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/data/__init__.py +6 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/data/datasets.json +1 -1
- iints_sdk_python35-0.1.13/src/iints/data/nightscout.py +128 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/data/registry.py +6 -1
- iints_sdk_python35-0.1.13/src/iints/data/tidepool.py +38 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/highlevel.py +5 -0
- iints_sdk_python35-0.1.13/src/iints/scenarios/__init__.py +3 -0
- iints_sdk_python35-0.1.13/src/iints/scenarios/generator.py +88 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13/src/iints_sdk_python35.egg-info}/PKG-INFO +26 -1
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints_sdk_python35.egg-info/SOURCES.txt +5 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints_sdk_python35.egg-info/requires.txt +3 -0
- iints_sdk_python35-0.1.12/src/iints/core/safety/__init__.py +0 -4
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/LICENSE +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/setup.cfg +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/analysis/__init__.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/analysis/algorithm_xray.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/analysis/baseline.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/analysis/clinical_benchmark.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/analysis/clinical_metrics.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/analysis/clinical_tir_analyzer.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/analysis/diabetes_metrics.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/analysis/edge_performance_monitor.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/analysis/explainability.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/analysis/explainable_ai.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/analysis/hardware_benchmark.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/analysis/metrics.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/analysis/reporting.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/analysis/sensor_filtering.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/analysis/validator.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/api/__init__.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/api/base_algorithm.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/api/template_algorithm.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/assets/iints_logo.png +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/cli/__init__.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/core/__init__.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/core/algorithms/__init__.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/core/algorithms/battle_runner.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/core/algorithms/correction_bolus.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/core/algorithms/discovery.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/core/algorithms/fixed_basal_bolus.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/core/algorithms/hybrid_algorithm.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/core/algorithms/lstm_algorithm.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/core/algorithms/mock_algorithms.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/core/algorithms/pid_controller.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/core/algorithms/standard_pump_algo.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/core/device.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/core/device_manager.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/core/devices/__init__.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/core/devices/models.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/core/patient/__init__.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/core/patient/models.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/core/patient/patient_factory.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/core/patient/profile.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/core/simulation/__init__.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/core/simulation/scenario_parser.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/data/adapter.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/data/column_mapper.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/data/demo/__init__.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/data/demo/demo_cgm.csv +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/data/importer.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/data/ingestor.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/data/quality_checker.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/data/universal_parser.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/data/virtual_patients/clinic_safe_baseline.yaml +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/data/virtual_patients/clinic_safe_hyper_challenge.yaml +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/data/virtual_patients/clinic_safe_hypo_prone.yaml +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/data/virtual_patients/clinic_safe_midnight.yaml +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/data/virtual_patients/clinic_safe_pizza.yaml +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/data/virtual_patients/clinic_safe_stress_meal.yaml +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/data/virtual_patients/default_patient.yaml +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/data/virtual_patients/patient_559_config.yaml +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/emulation/__init__.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/emulation/legacy_base.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/emulation/medtronic_780g.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/emulation/omnipod_5.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/emulation/tandem_controliq.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/learning/__init__.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/learning/autonomous_optimizer.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/learning/learning_system.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/metrics.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/presets/__init__.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/presets/presets.json +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/templates/__init__.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/templates/default_algorithm.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/templates/scenarios/__init__.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/templates/scenarios/example_scenario.json +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/utils/__init__.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/utils/plotting.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/validation/__init__.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/validation/schemas.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/visualization/__init__.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/visualization/cockpit.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints/visualization/uncertainty_cloud.py +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints_sdk_python35.egg-info/dependency_links.txt +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints_sdk_python35.egg-info/entry_points.txt +0 -0
- {iints_sdk_python35-0.1.12 → iints_sdk_python35-0.1.13}/src/iints_sdk_python35.egg-info/top_level.txt +0 -0
{iints_sdk_python35-0.1.12/src/iints_sdk_python35.egg-info → iints_sdk_python35-0.1.13}/PKG-INFO
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Metadata-Version: 2.4
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Name: iints-sdk-python35
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Version: 0.1.
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Version: 0.1.13
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Summary: A pre-clinical Edge-AI SDK for diabetes management validation.
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Author-email: Rune Bobbaers <rune.bobbaers@gmail.com>
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Project-URL: Homepage, https://github.com/python35/IINTS-SDK
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# IINTS-AF SDK
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iints data fetch sample --output-dir data_packs/sample
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```
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```bash
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iints import-nightscout --url https://your-nightscout.example --output-dir results/nightscout_import
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```
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Scenario generator:
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iints scenarios generate --name "Random Stress Test" --output-path scenarios/generated_scenario.json
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```
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iints run-parallel --algo algorithms/example_algorithm.py --scenarios-dir scenarios --output-dir results/batch
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```
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Or run the full demo workflow (import + run + report) in one script:
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python3 examples/demo_quickstart_flow.py
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* Technical README: `TECHNICAL_README.md`
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* API Stability: `API_STABILITY.md`
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### Related Work & Inspiration
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We borrow techniques from the broader CGM/APS ecosystem, while differentiating with a safety‑first, audit‑ready workflow:
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* [simglucose (UVA/Padova)](https://github.com/jxx123/simglucose): gymnasium‑style interfaces and parallel batch execution concepts.
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* [OpenAPS / oref0](https://github.com/openaps/oref0): gold‑standard IOB logic and safety‑oriented control patterns.
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* [Nightscout](https://github.com/nightscout/cgm-remote-monitor) + [py-nightscout](https://pypi.org/project/py-nightscout/): reference for human‑in‑the‑loop CGM ingest (planned connector).
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* [Tidepool OpenAPI](https://developer.tidepool.org/TidepoolApi/): basis for a future cloud import client skeleton.
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### Ethics & Safety
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This SDK is for **research and validation**. It is not a medical device and does not provide clinical dosing advice.
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* [simglucose (UVA/Padova)](https://github.com/jxx123/simglucose): gymnasium‑style interfaces and parallel batch execution concepts.
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* [OpenAPS / oref0](https://github.com/openaps/oref0): gold‑standard IOB logic and safety‑oriented control patterns.
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* [Nightscout](https://github.com/nightscout/cgm-remote-monitor) + [py-nightscout](https://pypi.org/project/py-nightscout/): reference for human‑in‑the‑loop CGM ingest (planned connector).
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* [Tidepool OpenAPI](https://developer.tidepool.org/TidepoolApi/): basis for a future cloud import client skeleton.
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torch = [
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"torch>=1.9.0",
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]
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+
nightscout = [
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"py-nightscout",
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]
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[project.scripts]
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iints = "iints.cli.cli:app"
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@@ -3,7 +3,7 @@
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3
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import pandas as pd # Required for type hints like pd.DataFrame
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from typing import Optional
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-
__version__ = "0.1.
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+
__version__ = "0.1.13"
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# API Components for Algorithm Development
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from .api.base_algorithm import (
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@@ -27,7 +27,7 @@ except Exception: # pragma: no cover - fallback if torch/device manager import
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def get_device(self):
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return self._device
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-
from .core.safety import SafetySupervisor
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+
from .core.safety import SafetyConfig, SafetySupervisor
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from .core.devices.models import SensorModel, PumpModel
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from .core.algorithms.standard_pump_algo import StandardPumpAlgorithm
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from .core.algorithms.mock_algorithms import ConstantDoseAlgorithm, RandomDoseAlgorithm
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@@ -45,9 +45,12 @@ from .data.importer import (
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scenario_from_csv,
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scenario_from_dataframe,
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)
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+
from .data.nightscout import NightscoutConfig, import_nightscout
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+
from .data.tidepool import TidepoolClient, load_openapi_spec
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from .analysis.metrics import generate_benchmark_metrics # Added for benchmark
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from .analysis.reporting import ClinicalReportGenerator
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from .highlevel import run_simulation, run_full
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+
from .scenarios import ScenarioGeneratorConfig, generate_random_scenario
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# Placeholder for Reporting/Analysis
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# This will be further developed in a dedicated module (e.g., iints.analysis.reporting)
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@@ -105,6 +108,7 @@ __all__ = [
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"PatientProfile",
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"SimulationLimitError",
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"SafetySupervisor",
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+
"SafetyConfig",
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"SensorModel",
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"PumpModel",
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"StandardPumpAlgorithm",
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@@ -121,6 +125,10 @@ __all__ = [
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"load_demo_dataframe",
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"scenario_from_csv",
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"scenario_from_dataframe",
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+
"NightscoutConfig",
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+
"import_nightscout",
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+
"TidepoolClient",
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+
"load_openapi_spec",
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# Analysis Metrics
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"generate_benchmark_metrics",
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"ClinicalReportGenerator",
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@@ -131,4 +139,6 @@ __all__ = [
|
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# High-level API
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"run_simulation",
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"run_full",
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142
|
+
"ScenarioGeneratorConfig",
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|
+
"generate_random_scenario",
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|
]
|