idc-index-data 23.0.1__tar.gz → 23.0.3__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (38) hide show
  1. {idc_index_data-23.0.1 → idc_index_data-23.0.3}/.pre-commit-config.yaml +5 -5
  2. {idc_index_data-23.0.1 → idc_index_data-23.0.3}/PKG-INFO +1 -1
  3. {idc_index_data-23.0.1 → idc_index_data-23.0.3}/pyproject.toml +1 -1
  4. {idc_index_data-23.0.1 → idc_index_data-23.0.3}/scripts/sql/analysis_results_index.sql +3 -3
  5. {idc_index_data-23.0.1 → idc_index_data-23.0.3}/scripts/sql/idc_index.sql +1 -1
  6. {idc_index_data-23.0.1 → idc_index_data-23.0.3}/.git_archival.txt +0 -0
  7. {idc_index_data-23.0.1 → idc_index_data-23.0.3}/.gitattributes +0 -0
  8. {idc_index_data-23.0.1 → idc_index_data-23.0.3}/.github/CONTRIBUTING.md +0 -0
  9. {idc_index_data-23.0.1 → idc_index_data-23.0.3}/.github/copilot-instructions.md +0 -0
  10. {idc_index_data-23.0.1 → idc_index_data-23.0.3}/.github/dependabot.yml +0 -0
  11. {idc_index_data-23.0.1 → idc_index_data-23.0.3}/.github/matchers/pylint.json +0 -0
  12. {idc_index_data-23.0.1 → idc_index_data-23.0.3}/.github/workflows/cd.yml +0 -0
  13. {idc_index_data-23.0.1 → idc_index_data-23.0.3}/.github/workflows/ci.yml +0 -0
  14. {idc_index_data-23.0.1 → idc_index_data-23.0.3}/.github/workflows/external-indices.yml +0 -0
  15. {idc_index_data-23.0.1 → idc_index_data-23.0.3}/.gitignore +0 -0
  16. {idc_index_data-23.0.1 → idc_index_data-23.0.3}/.readthedocs.yaml +0 -0
  17. {idc_index_data-23.0.1 → idc_index_data-23.0.3}/CMakeLists.txt +0 -0
  18. {idc_index_data-23.0.1 → idc_index_data-23.0.3}/LICENSE +0 -0
  19. {idc_index_data-23.0.1 → idc_index_data-23.0.3}/README.md +0 -0
  20. {idc_index_data-23.0.1 → idc_index_data-23.0.3}/assets/README.md +0 -0
  21. {idc_index_data-23.0.1 → idc_index_data-23.0.3}/assets/clinical_index.sql +0 -0
  22. {idc_index_data-23.0.1 → idc_index_data-23.0.3}/assets/sm_index.sql +0 -0
  23. {idc_index_data-23.0.1 → idc_index_data-23.0.3}/assets/sm_instance_index.sql +0 -0
  24. {idc_index_data-23.0.1 → idc_index_data-23.0.3}/docs/conf.py +0 -0
  25. {idc_index_data-23.0.1 → idc_index_data-23.0.3}/docs/index.md +0 -0
  26. {idc_index_data-23.0.1 → idc_index_data-23.0.3}/noxfile.py +0 -0
  27. {idc_index_data-23.0.1 → idc_index_data-23.0.3}/pytest.ini +0 -0
  28. {idc_index_data-23.0.1 → idc_index_data-23.0.3}/scripts/python/generate-indices.py +0 -0
  29. {idc_index_data-23.0.1 → idc_index_data-23.0.3}/scripts/python/idc_index_data_manager.py +0 -0
  30. {idc_index_data-23.0.1 → idc_index_data-23.0.3}/scripts/python/update_idc_index_version.py +0 -0
  31. {idc_index_data-23.0.1 → idc_index_data-23.0.3}/scripts/sql/collections_index.sql +0 -0
  32. {idc_index_data-23.0.1 → idc_index_data-23.0.3}/scripts/sql/prior_versions_index.sql +0 -0
  33. {idc_index_data-23.0.1 → idc_index_data-23.0.3}/src/idc_index_data/__init__.py +0 -0
  34. {idc_index_data-23.0.1 → idc_index_data-23.0.3}/src/idc_index_data/_version.pyi +0 -0
  35. {idc_index_data-23.0.1 → idc_index_data-23.0.3}/src/idc_index_data/py.typed +0 -0
  36. {idc_index_data-23.0.1 → idc_index_data-23.0.3}/tests/test_column_description_parser.py +0 -0
  37. {idc_index_data-23.0.1 → idc_index_data-23.0.3}/tests/test_package.py +0 -0
  38. {idc_index_data-23.0.1 → idc_index_data-23.0.3}/tests/test_real_sql_parsing.py +0 -0
@@ -33,21 +33,21 @@ repos:
33
33
  - id: rst-inline-touching-normal
34
34
 
35
35
  - repo: https://github.com/rbubley/mirrors-prettier
36
- rev: "v3.6.2"
36
+ rev: "v3.7.4"
37
37
  hooks:
38
38
  - id: prettier
39
39
  types_or: [yaml, markdown, html, css, scss, javascript, json]
40
40
  args: [--prose-wrap=always]
41
41
 
42
42
  - repo: https://github.com/astral-sh/ruff-pre-commit
43
- rev: "v0.14.5"
43
+ rev: "v0.14.9"
44
44
  hooks:
45
45
  - id: ruff-check
46
46
  args: ["--fix", "--show-fixes"]
47
47
  - id: ruff-format
48
48
 
49
49
  - repo: https://github.com/pre-commit/mirrors-mypy
50
- rev: "v1.18.2"
50
+ rev: "v1.19.1"
51
51
  hooks:
52
52
  - id: mypy
53
53
  files: src|tests
@@ -76,12 +76,12 @@ repos:
76
76
  exclude: .pre-commit-config.yaml
77
77
 
78
78
  - repo: https://github.com/henryiii/validate-pyproject-schema-store
79
- rev: "2025.11.14"
79
+ rev: "2025.11.21"
80
80
  hooks:
81
81
  - id: validate-pyproject
82
82
 
83
83
  - repo: https://github.com/python-jsonschema/check-jsonschema
84
- rev: "0.35.0"
84
+ rev: "0.36.0"
85
85
  hooks:
86
86
  - id: check-dependabot
87
87
  - id: check-github-workflows
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: idc-index-data
3
- Version: 23.0.1
3
+ Version: 23.0.3
4
4
  Summary: ImagingDataCommons index to query and download data.
5
5
  Author-Email: Andrey Fedorov <andrey.fedorov@gmail.com>, Vamsi Thiriveedhi <vthiriveedhi@mgh.harvard.edu>, Jean-Christophe Fillion-Robin <jchris.fillionr@kitware.com>
6
6
  License: Copyright 2024 Andrey Fedorov
@@ -13,7 +13,7 @@ build-backend = "scikit_build_core.build"
13
13
 
14
14
  [project]
15
15
  name = "idc-index-data"
16
- version = "23.0.1"
16
+ version = "23.0.3"
17
17
  authors = [
18
18
  { name = "Andrey Fedorov", email = "andrey.fedorov@gmail.com" },
19
19
  { name = "Vamsi Thiriveedhi", email = "vthiriveedhi@mgh.harvard.edu" },
@@ -11,7 +11,7 @@ SELECT
11
11
  Title AS analysis_result_title,
12
12
  # description:
13
13
  # Digital Object Identifier (DOI) of the analysis results collection
14
- source_doi,
14
+ source_doi AS source_DOI,
15
15
  # description:
16
16
  # URL for the location of additional information about the analysis results collection
17
17
  source_url,
@@ -22,8 +22,8 @@ SELECT
22
22
  # collections analyzed in the analysis results collection
23
23
  Collections,
24
24
  # description:
25
- # analysis artifacts included in the analysis results collection
26
- AnalysisArtifacts,
25
+ # modalities corresponding to the analysis artifacts included in the analysis results collection
26
+ Modalities,
27
27
  # description:
28
28
  # timestamp of the last update to the analysis results collection
29
29
  Updated,
@@ -41,7 +41,7 @@ SELECT
41
41
  # textual description of the study content (DICOM attribute)
42
42
  ANY_VALUE(StudyDescription) AS StudyDescription,
43
43
  # description:
44
- # body part imaged (not iniapplicabletialized for SM series) (DICOM attribute)
44
+ # body part imaged (not applicable for SM series) (DICOM attribute)
45
45
  ANY_VALUE(dicom_curated.BodyPartExamined) AS BodyPartExamined,
46
46
  # series level attributes
47
47
  # description:
File without changes