idc-index-data 17.0.0__tar.gz → 17.0.1__tar.gz

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  1. {idc_index_data-17.0.0 → idc_index_data-17.0.1}/CMakeLists.txt +2 -2
  2. {idc_index_data-17.0.0 → idc_index_data-17.0.1}/PKG-INFO +1 -1
  3. {idc_index_data-17.0.0 → idc_index_data-17.0.1}/pyproject.toml +1 -1
  4. {idc_index_data-17.0.0 → idc_index_data-17.0.1}/scripts/python/idc_index_data_manager.py +1 -1
  5. {idc_index_data-17.0.0 → idc_index_data-17.0.1}/src/idc_index_data/__init__.py +2 -4
  6. {idc_index_data-17.0.0 → idc_index_data-17.0.1}/.git_archival.txt +0 -0
  7. {idc_index_data-17.0.0 → idc_index_data-17.0.1}/.gitattributes +0 -0
  8. {idc_index_data-17.0.0 → idc_index_data-17.0.1}/.github/CONTRIBUTING.md +0 -0
  9. {idc_index_data-17.0.0 → idc_index_data-17.0.1}/.github/dependabot.yml +0 -0
  10. {idc_index_data-17.0.0 → idc_index_data-17.0.1}/.github/matchers/pylint.json +0 -0
  11. {idc_index_data-17.0.0 → idc_index_data-17.0.1}/.github/workflows/cd.yml +0 -0
  12. {idc_index_data-17.0.0 → idc_index_data-17.0.1}/.github/workflows/ci.yml +0 -0
  13. {idc_index_data-17.0.0 → idc_index_data-17.0.1}/.github/workflows/keep-alive.yml +0 -0
  14. {idc_index_data-17.0.0 → idc_index_data-17.0.1}/.gitignore +0 -0
  15. {idc_index_data-17.0.0 → idc_index_data-17.0.1}/.pre-commit-config.yaml +0 -0
  16. {idc_index_data-17.0.0 → idc_index_data-17.0.1}/.readthedocs.yaml +0 -0
  17. {idc_index_data-17.0.0 → idc_index_data-17.0.1}/LICENSE +0 -0
  18. {idc_index_data-17.0.0 → idc_index_data-17.0.1}/README.md +0 -0
  19. {idc_index_data-17.0.0 → idc_index_data-17.0.1}/docs/conf.py +0 -0
  20. {idc_index_data-17.0.0 → idc_index_data-17.0.1}/docs/index.md +0 -0
  21. {idc_index_data-17.0.0 → idc_index_data-17.0.1}/noxfile.py +0 -0
  22. {idc_index_data-17.0.0 → idc_index_data-17.0.1}/scripts/python/update_idc_index_version.py +0 -0
  23. {idc_index_data-17.0.0 → idc_index_data-17.0.1}/scripts/sql/idc_index.sql +0 -0
  24. {idc_index_data-17.0.0 → idc_index_data-17.0.1}/src/idc_index_data/_version.pyi +0 -0
  25. {idc_index_data-17.0.0 → idc_index_data-17.0.1}/src/idc_index_data/py.typed +0 -0
  26. {idc_index_data-17.0.0 → idc_index_data-17.0.1}/tests/test_package.py +0 -0
@@ -10,8 +10,8 @@ if(NOT DEFINED ENV{GCP_PROJECT})
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  message(FATAL_ERROR "GCP_PROJECT env. variable is not set")
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  endif()
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- option(IDC_INDEX_DATA_GENERATE_CSV_ARCHIVE "Generate idc_index.csv.zip file" ON)
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- option(IDC_INDEX_DATA_GENERATE_PARQUET "Generate idc_index.parquet file" OFF)
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+ option(IDC_INDEX_DATA_GENERATE_CSV_ARCHIVE "Generate idc_index.csv.zip file" OFF)
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+ option(IDC_INDEX_DATA_GENERATE_PARQUET "Generate idc_index.parquet file" ON)
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  set(download_dir "${PROJECT_BINARY_DIR}")
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@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: idc-index-data
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- Version: 17.0.0
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+ Version: 17.0.1
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  Summary: ImagingDataCommons index to query and download data.
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  Author-Email: Andrey Fedorov <andrey.fedorov@gmail.com>, Vamsi Thiriveedhi <vthiriveedhi@mgh.harvard.edu>, Jean-Christophe Fillion-Robin <jchris.fillionr@kitware.com>
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  License: Copyright 2024 Andrey Fedorov
@@ -13,7 +13,7 @@ build-backend = "scikit_build_core.build"
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  [project]
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  name = "idc-index-data"
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- version = "17.0.0"
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+ version = "17.0.1"
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  authors = [
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  { name = "Andrey Fedorov", email = "andrey.fedorov@gmail.com" },
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  { name = "Vamsi Thiriveedhi", email = "vthiriveedhi@mgh.harvard.edu" },
@@ -66,7 +66,7 @@ class IDCIndexDataManager:
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  if generate_parquet:
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  parquet_file_name = f"{output_basename}.parquet"
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- index_df.to_parquet(parquet_file_name)
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+ index_df.to_parquet(parquet_file_name, compression="zstd")
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  logger.debug("Created Parquet file: %s", parquet_file_name)
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  def retrieve_latest_idc_release_version(self) -> int:
@@ -33,8 +33,6 @@ def _lookup(path: str, optional: bool = False) -> Path | None:
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  IDC_INDEX_CSV_ARCHIVE_FILEPATH: Path | None = _lookup(
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- "idc_index_data/idc_index.csv.zip"
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- )
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- IDC_INDEX_PARQUET_FILEPATH: Path | None = _lookup(
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- "idc_index_data/idc_index.parquet", optional=True
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+ "idc_index_data/idc_index.csv.zip", optional=True
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  )
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+ IDC_INDEX_PARQUET_FILEPATH: Path | None = _lookup("idc_index_data/idc_index.parquet")
File without changes