ialdev-vis 0.1.0__tar.gz

ialdev_vis-0.1.0/PKG-INFO

@@ -0,0 +1,39 @@
+Metadata-Version: 2.4
+Name: ialdev-vis
+Version: 0.1.0
+Summary: iad.vis — visualization utilities (image grids, viewers, colormaps, matplotlib helpers)
+Requires-Python: >=3.10
+Description-Content-Type: text/markdown
+Classifier: Development Status :: 4 - Beta
+Classifier: Intended Audience :: Developers
+Classifier: Intended Audience :: Science/Research
+Classifier: Programming Language :: Python :: 3
+Classifier: Programming Language :: Python :: 3.10
+Classifier: Programming Language :: Python :: 3.11
+Classifier: Programming Language :: Python :: 3.12
+Requires-Dist: ialdev-core
+Requires-Dist: ialdev-io
+Requires-Dist: matplotlib>=3.5.0
+Requires-Dist: numpy>=1.20.0
+Requires-Dist: regex>=2021.0.0
+Requires-Dist: open3d>=0.15.0 ; extra == "3d"
+Requires-Dist: ipyvolume>=0.6.0 ; extra == "3d"
+Requires-Dist: ialdev-vis[qt, jupyter, 3d, dev] ; extra == "all"
+Requires-Dist: pytest>=7.0.0 ; extra == "dev"
+Requires-Dist: pytest-cov>=3.0.0 ; extra == "dev"
+Requires-Dist: ipywidgets>=7.0.0 ; extra == "jupyter"
+Requires-Dist: IPython>=7.0.0 ; extra == "jupyter"
+Requires-Dist: PyQt5>=5.15.0 ; extra == "qt"
+Requires-Dist: scikit-image>=0.19.0 ; extra == "qt"
+Provides-Extra: 3d
+Provides-Extra: all
+Provides-Extra: dev
+Provides-Extra: jupyter
+Provides-Extra: qt
+
+# ialdev-vis
+
+`iad.vis` — visualization utilities (image grids, viewers, colormaps, matplotlib helpers).
+
+Install: `pip install ialdev-vis`
+

ialdev_vis-0.1.0/README.md

@@ -0,0 +1,5 @@
+# ialdev-vis
+
+`iad.vis` — visualization utilities (image grids, viewers, colormaps, matplotlib helpers).
+
+Install: `pip install ialdev-vis`

ialdev_vis-0.1.0/pyproject.toml

@@ -0,0 +1,63 @@
+[build-system]
+requires = ["flit_core>=3.11,<4"]
+build-backend = "flit_core.buildapi"
+
+[project]
+name = "ialdev-vis"
+version = "0.1.0"
+description = "iad.vis — visualization utilities (image grids, viewers, colormaps, matplotlib helpers)"
+readme = "README.md"
+requires-python = ">=3.10"
+license = {text = "MIT"}
+classifiers = [
+    "Development Status :: 4 - Beta",
+    "Intended Audience :: Developers",
+    "Intended Audience :: Science/Research",
+    "Programming Language :: Python :: 3",
+    "Programming Language :: Python :: 3.10",
+    "Programming Language :: Python :: 3.11",
+    "Programming Language :: Python :: 3.12",
+]
+
+dependencies = [
+    "ialdev-core",
+    "ialdev-io",
+    "matplotlib>=3.5.0",
+    "numpy>=1.20.0",
+    "regex>=2021.0.0",
+]
+
+[project.optional-dependencies]
+qt = [
+    "PyQt5>=5.15.0",
+    "scikit-image>=0.19.0",
+]
+jupyter = [
+    "ipywidgets>=7.0.0",
+    "IPython>=7.0.0",
+]
+"3d" = [
+    "open3d>=0.15.0",
+    "ipyvolume>=0.6.0",
+]
+dev = [
+    "pytest>=7.0.0",
+    "pytest-cov>=3.0.0",
+]
+all = [
+    "ialdev-vis[qt,jupyter,3d,dev]",
+]
+
+[tool.flit.module]
+name = "iad.vis"
+
+[tool.pytest.ini_options]
+testpaths = ["tests"]
+python_files = ["test_*.py"]
+python_classes = ["Test*"]
+python_functions = ["test_*"]
+
+[tool.black]
+line-length = 100
+target-version = ["py310", "py311", "py312"]
+include = '\.pyi?$'

ialdev_vis-0.1.0/src/iad/vis/__init__.py

@@ -0,0 +1,6 @@
+"""Flow analysis package
+Evaluation scripts, Data Transfromation & Analysis
+Visualization, Metrics, Reports
+"""
+
+from .insight import imgrid, imhist

ialdev_vis-0.1.0/src/iad/vis/colormaps/blush_cm.py

@@ -0,0 +1,18 @@
+_hex_colors = [0x2c5d86, 0x2d6088, 0x2d6389, 0x2e668b, 0x2f688c, 0x2f6b8e, 0x306d8f, 0x317090, 0x327291,
+               0x337592, 0x347793, 0x357a94, 0x367c95, 0x387e96, 0x398197, 0x3b8398, 0x3c8598, 0x3e8799,
+               0x408999, 0x418b9a, 0x438d9a, 0x458f9a, 0x47919a, 0x49939b, 0x4b959b, 0x4d969b, 0x4f989b,
+               0x519a9a, 0x539c9a, 0x559d9a, 0x579f99, 0x5aa099, 0x5ca299, 0x5ea398, 0x60a497, 0x63a696,
+               0x65a796, 0x67a895, 0x69a994, 0x6cab93, 0x6eac92, 0x70ad90, 0x72ae8f, 0x75af8e, 0x77af8c,
+               0x79b08b, 0x7bb189, 0x7eb288, 0x80b286, 0x82b384, 0x84b482, 0x87b480, 0x89b57e, 0x8bb57c,
+               0x8db67a, 0x8fb678, 0x91b676, 0x93b673, 0x95b771, 0x97b76e, 0x99b76b, 0x9bb768, 0x9db766,
+               0x9fb763, 0xa1b760, 0xa4b75f, 0xa6b75d, 0xa8b75c, 0xabb75a, 0xadb759, 0xafb758, 0xb1b756,
+               0xb4b755, 0xb6b653, 0xb8b652, 0xbab650, 0xbcb54f, 0xbeb54d, 0xc0b54c, 0xc2b44a, 0xc4b449,
+               0xc6b347, 0xc8b246, 0xc9b244, 0xcbb143, 0xcdb041, 0xcfaf40, 0xd1af3e, 0xd2ae3d, 0xd4ad3b,
+               0xd6ac3a, 0xd7ab38, 0xd9aa37, 0xdaa835, 0xdca734, 0xdea633, 0xdfa531, 0xe1a330, 0xe2a22e,
+               0xe3a02d, 0xe59f2b, 0xe69d2a, 0xe79c28, 0xe99a27, 0xea9825, 0xeb9724, 0xec9523, 0xee9321,
+               0xef9120, 0xf08f1e, 0xf18d1d, 0xf28a1c, 0xf3881a, 0xf48619, 0xf58318, 0xf68116, 0xf77e15,
+               0xf87c14, 0xf97913, 0xfa7611, 0xfa7310, 0xfb700f, 0xfc6d0e, 0xfd690d, 0xfd660c, 0xfe620b,
+               0xfe501a, 0xff4b29]
+
+cm_data = [*map(lambda x: [((x >> sh) & 0xff)/0xff for sh in (16, 8, 0)],
+                _hex_colors)]

ialdev_vis-0.1.0/src/iad/vis/colormaps/glow_cm.py

@@ -0,0 +1,280 @@
+from matplotlib.colors import ListedColormap
+
+# Used to reconstruct the colormap in viscm
+parameters = {'xp': [-16.253504798878453, -21.443303138142994, -12.880135878356498, 22.18399130749728, 22.18399130749728, 63.43565133405767, 43.10032596885182, 2.6892591394370697, -3.380417723047202, 49.137954275854639, -19.107893885473942, -51.02515367195079, -42.202496495201103, -12.101666127466842, 9.9549768144074164],
+              'yp': [-13.812277580071168, -21.337485172004733, -38.204329774614465, -38.74501992031871, -22.767264276228417, 25.74701195219123, 25.456507304116855, 6.9469157769869696, 61.18857901726426, -13.552787663107949, 71.040925266903912, 33.933867141162523, -9.1414590747330919, 25.111209964412808, 12.655693950177948],
+              'min_Jp': 57.5,
+              'max_Jp': 80.3125}
+
+cm_data = [[ 0.26416192, 0.56519848, 0.65345367],
+           [ 0.24702777, 0.56781828, 0.66297905],
+           [ 0.23008782, 0.57012064, 0.6730557 ],
+           [ 0.21380132, 0.57207798, 0.68354781],
+           [ 0.19869516, 0.57367423, 0.69431641],
+           [ 0.18533134, 0.5749048 , 0.70523844],
+           [ 0.17433945, 0.57577423, 0.71616419],
+           [ 0.16623584, 0.57629598, 0.72700658],
+           [ 0.16143655, 0.57648758, 0.73767881],
+           [ 0.16014921, 0.57637282, 0.74808254],
+           [ 0.1622909 , 0.57597464, 0.75817083],
+           [ 0.16755163, 0.57531543, 0.7679058 ],
+           [ 0.17546303, 0.57441838, 0.77724978],
+           [ 0.18549281, 0.57330638, 0.78617259],
+           [ 0.19710922, 0.57200518, 0.79463971],
+           [ 0.20988767, 0.57053074, 0.80265333],
+           [ 0.22346653, 0.56890212, 0.81020225],
+           [ 0.23756147, 0.56713731, 0.81727925],
+           [ 0.2519545 , 0.56525317, 0.8238806 ],
+           [ 0.26648103, 0.56326556, 0.83000549],
+           [ 0.28101798, 0.56118929, 0.83565577],
+           [ 0.29547395, 0.55903818, 0.84083559],
+           [ 0.30978147, 0.55682512, 0.84555118],
+           [ 0.32389118, 0.55456202, 0.84981067],
+           [ 0.33776738, 0.55225991, 0.85362382],
+           [ 0.35138483, 0.54992885, 0.85700192],
+           [ 0.36472624, 0.54757804, 0.85995753],
+           [ 0.37778051, 0.54521578, 0.86250431],
+           [ 0.39054131, 0.54284949, 0.86465688],
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+           [ 0.54548205, 0.78691906, 0.49352366],
+           [ 0.55913683, 0.78460796, 0.49689986],
+           [ 0.572339  , 0.78232422, 0.49992779],
+           [ 0.58513026, 0.78006521, 0.50263393],
+           [ 0.59742227, 0.77786452, 0.50502515],
+           [ 0.60935688, 0.77569009, 0.50713862],
+           [ 0.62099847, 0.77352921, 0.50899416],
+           [ 0.63229911, 0.77140195, 0.51060087],
+           [ 0.64329368, 0.76930343, 0.51197622],
+           [ 0.65409054, 0.76720409, 0.51313748],
+           [ 0.664623  , 0.76512875, 0.51409599],
+           [ 0.67495644, 0.7630597 , 0.51486731],
+           [ 0.6851651 , 0.76097437, 0.51546379],
+           [ 0.6951461 , 0.75890943, 0.51590594],
+           [ 0.70504283, 0.75681717, 0.51620464],
+           [ 0.71481733, 0.75471111, 0.51638105],
+           [ 0.72448373, 0.75258649, 0.5164558 ],
+           [ 0.73410277, 0.75042063, 0.51644598],
+           [ 0.74360211, 0.74823951, 0.516385  ],
+           [ 0.75307844, 0.74600553, 0.51628923],
+           [ 0.76247525, 0.74373861, 0.51619463],
+           [ 0.77183314, 0.74142105, 0.51612729],
+           [ 0.78113723, 0.73905659, 0.51612147],
+           [ 0.79038148, 0.73664558, 0.51621145],
+           [ 0.79957674, 0.73418117, 0.51643087],
+           [ 0.80868843, 0.731676  , 0.51681788],
+           [ 0.81773714, 0.72911902, 0.51740695],
+           [ 0.82667802, 0.72652836, 0.51823588],
+           [ 0.83552438, 0.72389641, 0.51934042],
+           [ 0.84424002, 0.72123868, 0.5207559 ],
+           [ 0.85281922, 0.71855699, 0.52251752],
+           [ 0.86123717, 0.71586282, 0.52465808],
+           [ 0.86947152, 0.71316731, 0.52720817],
+           [ 0.87751183, 0.71047596, 0.53019957],
+           [ 0.88531421, 0.70781291, 0.53365053],
+           [ 0.89289294, 0.70517135, 0.53759748],
+           [ 0.9001721 , 0.70259592, 0.54203027],
+           [ 0.90720584, 0.70005729, 0.54700442],
+           [ 0.91387569, 0.69762949, 0.55245368],
+           [ 0.92028844, 0.69524994, 0.55847851]]
+
+test_cm = ListedColormap(cm_data, name=__file__)
+
+
+if __name__ == "__main__":
+    import matplotlib.pyplot as plt
+    import numpy as np
+
+    try:
+        from viscm import viscm
+        viscm(test_cm)
+    except ImportError:
+        print("viscm not found, falling back on simple display")
+        plt.imshow(np.linspace(0, 100, 256)[None, :], aspect='auto',
+                   cmap=test_cm)
+    plt.show()

ialdev_vis-0.1.0/src/iad/vis/colormaps/rain.jscm

@@ -0,0 +1,62 @@
+{
+    "content-type": "application/vnd.matplotlib.colormap-v1+json",
+    "name": "new cm",
+    "license": "http://creativecommons.org/publicdomain/zero/1.0/",
+    "usage-hints": [
+        "red-green-colorblind-safe",
+        "greyscale-safe",
+        "sequential"
+    ],
+    "colorspace": "sRGB",
+    "domain": "continuous",
+    "colors": "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",
+    "extensions": {
+        "https://matplotlib.org/viscm": {
+            "min_Jp": 16,
+            "max_Jp": 93,
+            "xp": [
+                -3.5551119583642787,
+                7.31888559498627,
+                5.341795130740721,
+                -6.644315808747962,
+                -6.520747654732602,
+                -9.362815197085595,
+                -15.417654743837602,
+                -14.799813973760877,
+                24.00058638705815,
+                27.584062853503212,
+                11.520202831508072,
+                -17.641881516113855,
+                -28.268742761433714,
+                -18.753994902251975,
+                -8.003565502916771,
+                -1.2073170320726803,
+                1.1404778942189182
+            ],
+            "yp": [
+                -18.936201762081865,
+                -19.801178840189294,
+                -29.81019931543242,
+                -36.730015940291864,
+                -24.249632384741794,
+                -19.67761068617395,
+                -11.645680675176386,
+                10.225882585540063,
+                -3.119478048117429,
+                15.16860874615395,
+                27.772560455719358,
+                16.774994748353464,
+                26.536878915565893,
+                32.09744584625652,
+                32.715286616333245,
+                30.367491690041646,
+                16.89856290236881
+            ],
+            "fixed": -1,
+            "filter_k": 100,
+            "cmtype": "linear",
+            "uniform_colorspace": "CAM02-UCS",
+            "spline_method": "CatmulClark"
+        }
+    }
+}