hoa-tools 1.0.8__tar.gz → 1.0.9__tar.gz

{hoa_tools-1.0.8 → hoa_tools-1.0.9}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: hoa-tools
-Version: 1.0.8
+Version: 1.0.9
 Summary: Tools for working with the Human Organ Atlas
 Author-email: David Stansby <d.stansby@ucl.ac.uk>
 License: Copyright (c) 2024, David Stansby

{hoa_tools-1.0.8 → hoa_tools-1.0.9}/docs/release-notes.md

@@ -1,5 +1,26 @@
 # Release notes
 
+## 1.0.9
+
+- Fixed a bug in 1.0.8 where the internal data model was not updated to agree with the new metadata schema.
+- Updated these release notes for previous releases.
+
+## 1.0.8
+
+- Updated to the latest bundled metadata.
+
+## 1.0.7
+
+- Updated the citation file
+
+## 1.0.6
+
+- Updated to the latest bundled metadata.
+
+## 1.0.6
+
+- Updated to the latest bundled metadata.
+
 ## 1.0.4
 
 - Fixed a bug that prevented transforming VOIs between two datasets that

{hoa_tools-1.0.8 → hoa_tools-1.0.9}/src/hoa_tools/_version.py

@@ -28,7 +28,7 @@ version_tuple: VERSION_TUPLE
 commit_id: COMMIT_ID
 __commit_id__: COMMIT_ID
 
-__version__ = version = '1.0.8'
-__version_tuple__ = version_tuple = (1, 0, 8)
+__version__ = version = '1.0.9'
+__version_tuple__ = version_tuple = (1, 0, 9)
 
-__commit_id__ = commit_id = 'g0f5407271'
+__commit_id__ = commit_id = 'g544995990'

{hoa_tools-1.0.8 → hoa_tools-1.0.9}/src/hoa_tools/metadata.py

@@ -1,10 +1,10 @@
 # generated by datamodel-codegen:
 #   filename:  metadata-schema.json
-#   timestamp: 2025-07-07T14:56:30+00:00
+#   timestamp: 2025-10-22T15:38:14+00:00
 
 from __future__ import annotations
 
-from datetime import date
+from datetime import date as date_aliased
 from typing import Annotated, Literal
 
 from pydantic import BaseModel, ConfigDict, Field, RootModel
@@ -111,7 +111,7 @@ class Donor(BaseModel):
         Height | None, Field(description="Height in cm at death.", title="Height")
     ] = None
     cause_of_death: Annotated[str | None, Field(title="Cause of death")] = None
-    date_of_death: Annotated[date | None, Field(title="Date of death")] = None
+    date_of_death: Annotated[date_aliased | None, Field(title="Date of death")] = None
     medical_history: Annotated[str | None, Field(title="Medical history")] = None
     diabetes: Annotated[
         Literal["Type 2", "No", "Yes"] | None, Field(title="Diabetes history")
@@ -183,6 +183,7 @@ class Sample(BaseModel):
         Literal[
             "brain",
             "breast",
+            "clitoris",
             "colon",
             "eye",
             "femaleGenitalia",
@@ -460,7 +461,8 @@ class XrayMagnification(RootModel[float]):
 
 class Scan(BaseModel):
     date: Annotated[
-        date, Field(description="Date when the scan was performed.", title="Date")
+        date_aliased,
+        Field(description="Date when the scan was performed.", title="Date"),
     ]
     beamline: Annotated[
         Literal["BM05", "BM18"],
@@ -622,12 +624,13 @@ class Scan(BaseModel):
             "Hasselblad tandem optic 100mm/300mm",
             "Hasselblad revolved 100 100",
             "LAFIP2 optic with canon 50mm",
+            "Fixed x10",
+            "Fixed x2.85",
             "Fixed x2",
             "Fixed x1",
+            "Fixed x0.5",
             "Fixed x0.125",
             "Fixed x0.1",
-            "Fixed x2.85",
-            "Fixed x10",
             "Twinmic 5",
             "Twinmic 10",
             "Twinmic 20",

{hoa_tools-1.0.8 → hoa_tools-1.0.9}/src/hoa_tools.egg-info/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: hoa-tools
-Version: 1.0.8
+Version: 1.0.9
 Summary: Tools for working with the Human Organ Atlas
 Author-email: David Stansby <d.stansby@ucl.ac.uk>
 License: Copyright (c) 2024, David Stansby