hjxdl 0.0.3__tar.gz → 0.0.4__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (116) hide show
  1. {hjxdl-0.0.3/hjxdl.egg-info → hjxdl-0.0.4}/PKG-INFO +1 -1
  2. hjxdl-0.0.4/hdl/__init__.py +1 -0
  3. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/_version.py +2 -2
  4. {hjxdl-0.0.3 → hjxdl-0.0.4/hjxdl.egg-info}/PKG-INFO +1 -1
  5. hjxdl-0.0.4/version.txt +1 -0
  6. hjxdl-0.0.3/hdl/utils/schedulers/__init__.py +0 -0
  7. hjxdl-0.0.3/version.txt +0 -1
  8. {hjxdl-0.0.3 → hjxdl-0.0.4}/.github/workflows/python-publish.yml +0 -0
  9. {hjxdl-0.0.3 → hjxdl-0.0.4}/.gitignore +0 -0
  10. {hjxdl-0.0.3 → hjxdl-0.0.4}/.gitmodules +0 -0
  11. {hjxdl-0.0.3 → hjxdl-0.0.4}/MANIFEST.in +0 -0
  12. {hjxdl-0.0.3 → hjxdl-0.0.4}/README.md +0 -0
  13. {hjxdl-0.0.3 → hjxdl-0.0.4}/__init__.py +0 -0
  14. {hjxdl-0.0.3/hdl → hjxdl-0.0.4/hdl/args}/__init__.py +0 -0
  15. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/args/loss_args.py +0 -0
  16. {hjxdl-0.0.3/hdl/args → hjxdl-0.0.4/hdl/controllers}/__init__.py +0 -0
  17. {hjxdl-0.0.3/hdl/controllers → hjxdl-0.0.4/hdl/controllers/al}/__init__.py +0 -0
  18. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/controllers/al/al.py +0 -0
  19. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/controllers/al/dispatcher.py +0 -0
  20. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/controllers/al/feedback.py +0 -0
  21. {hjxdl-0.0.3/hdl/controllers/al → hjxdl-0.0.4/hdl/controllers/explain}/__init__.py +0 -0
  22. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/controllers/explain/shapley.py +0 -0
  23. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/controllers/explain/subgraphx.py +0 -0
  24. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/controllers/predictors/gin_predictor.py +0 -0
  25. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/controllers/predictors/rxn_predictor.py +0 -0
  26. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/controllers/predictors/torch_predictor.py +0 -0
  27. {hjxdl-0.0.3/hdl/controllers/explain → hjxdl-0.0.4/hdl/controllers/train}/__init__.py +0 -0
  28. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/controllers/train/rxn_train.py +0 -0
  29. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/controllers/train/train.py +0 -0
  30. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/controllers/train/train_ginet.py +0 -0
  31. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/controllers/train/trainer_base.py +0 -0
  32. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/controllers/train/trainer_iterative.py +0 -0
  33. {hjxdl-0.0.3/hdl/controllers/train → hjxdl-0.0.4/hdl/data}/__init__.py +0 -0
  34. {hjxdl-0.0.3/hdl/data → hjxdl-0.0.4/hdl/data/dataset}/__init__.py +0 -0
  35. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/data/dataset/base_dataset.py +0 -0
  36. {hjxdl-0.0.3/hdl/data/dataset → hjxdl-0.0.4/hdl/data/dataset/fp}/__init__.py +0 -0
  37. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/data/dataset/fp/fp_dataset.py +0 -0
  38. {hjxdl-0.0.3/hdl/data/dataset/fp → hjxdl-0.0.4/hdl/data/dataset/graph}/__init__.py +0 -0
  39. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/data/dataset/graph/chiral.py +0 -0
  40. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/data/dataset/graph/gin.py +0 -0
  41. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/data/dataset/graph/molnet.py +0 -0
  42. {hjxdl-0.0.3/hdl/data/dataset/graph → hjxdl-0.0.4/hdl/data/dataset/loaders}/__init__.py +0 -0
  43. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/data/dataset/loaders/chiral_graph.py +0 -0
  44. {hjxdl-0.0.3/hdl/data/dataset/loaders → hjxdl-0.0.4/hdl/data/dataset/loaders/collate_funcs}/__init__.py +0 -0
  45. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/data/dataset/loaders/collate_funcs/fp.py +0 -0
  46. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/data/dataset/loaders/collate_funcs/rxn.py +0 -0
  47. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/data/dataset/loaders/general.py +0 -0
  48. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/data/dataset/loaders/spliter.py +0 -0
  49. {hjxdl-0.0.3/hdl/data/dataset/loaders/collate_funcs → hjxdl-0.0.4/hdl/data/dataset/samplers}/__init__.py +0 -0
  50. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/data/dataset/samplers/chiral.py +0 -0
  51. {hjxdl-0.0.3/hdl/data/dataset/samplers → hjxdl-0.0.4/hdl/data/dataset/seq}/__init__.py +0 -0
  52. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/data/dataset/seq/rxn_dataset.py +0 -0
  53. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/data/dataset/utils.py +0 -0
  54. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/data/to_mols.py +0 -0
  55. {hjxdl-0.0.3/hdl/data/dataset/seq → hjxdl-0.0.4/hdl/features}/__init__.py +0 -0
  56. {hjxdl-0.0.3/hdl/features → hjxdl-0.0.4/hdl/features/fp}/__init__.py +0 -0
  57. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/features/fp/features_generators.py +0 -0
  58. {hjxdl-0.0.3/hdl/features/fp → hjxdl-0.0.4/hdl/features/graph}/__init__.py +0 -0
  59. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/features/graph/featurization.py +0 -0
  60. {hjxdl-0.0.3/hdl/features/graph → hjxdl-0.0.4/hdl/features/utils}/__init__.py +0 -0
  61. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/features/utils/utils.py +0 -0
  62. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/features/vocab.txt +0 -0
  63. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/include/add2.h +0 -0
  64. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/kernel/add2_kernel.cu +0 -0
  65. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/kernel/test +0 -0
  66. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/kernel/test.cu +0 -0
  67. {hjxdl-0.0.3/hdl/features/utils → hjxdl-0.0.4/hdl/layers}/__init__.py +0 -0
  68. {hjxdl-0.0.3/hdl/layers → hjxdl-0.0.4/hdl/layers/general}/__init__.py +0 -0
  69. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/layers/general/gp.py +0 -0
  70. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/layers/general/linear.py +0 -0
  71. {hjxdl-0.0.3/hdl/layers/general → hjxdl-0.0.4/hdl/layers/graph}/__init__.py +0 -0
  72. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/layers/graph/chiral_graph.py +0 -0
  73. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/layers/graph/gcn.py +0 -0
  74. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/layers/graph/gin.py +0 -0
  75. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/layers/graph/tetra.py +0 -0
  76. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/layers/graph/transformer.py +0 -0
  77. {hjxdl-0.0.3/hdl/layers/graph → hjxdl-0.0.4/hdl/layers/sequential}/__init__.py +0 -0
  78. {hjxdl-0.0.3/hdl/layers/sequential → hjxdl-0.0.4/hdl/metric_loss}/__init__.py +0 -0
  79. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/metric_loss/loss.py +0 -0
  80. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/metric_loss/metric.py +0 -0
  81. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/metric_loss/multi_label.py +0 -0
  82. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/metric_loss/nt_xent.py +0 -0
  83. {hjxdl-0.0.3/hdl/metric_loss → hjxdl-0.0.4/hdl/models}/__init__.py +0 -0
  84. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/models/chiral_gnn.py +0 -0
  85. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/models/fast_transformer.py +0 -0
  86. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/models/ginet.py +0 -0
  87. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/models/linear.py +0 -0
  88. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/models/model_dict.py +0 -0
  89. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/models/norm_flows.py +0 -0
  90. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/models/optim_dict.py +0 -0
  91. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/models/rxn.py +0 -0
  92. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/models/utils.py +0 -0
  93. {hjxdl-0.0.3/hdl/models → hjxdl-0.0.4/hdl/ops}/__init__.py +0 -0
  94. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/ops/utils.py +0 -0
  95. {hjxdl-0.0.3/hdl/ops → hjxdl-0.0.4/hdl/optims}/__init__.py +0 -0
  96. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/optims/nadam.py +0 -0
  97. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/pytorch/add2_ops.cpp +0 -0
  98. {hjxdl-0.0.3/hdl/optims → hjxdl-0.0.4/hdl/utils}/__init__.py +0 -0
  99. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/utils/chemical_tools/__init__.py +0 -0
  100. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/utils/chemical_tools/query_info.py +0 -0
  101. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/utils/chemical_tools/sdf.py +0 -0
  102. {hjxdl-0.0.3/hdl/utils → hjxdl-0.0.4/hdl/utils/database_tools}/__init__.py +0 -0
  103. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/utils/database_tools/connect.py +0 -0
  104. {hjxdl-0.0.3/hdl/utils/database_tools → hjxdl-0.0.4/hdl/utils/general}/__init__.py +0 -0
  105. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/utils/general/glob.py +0 -0
  106. {hjxdl-0.0.3/hdl/utils/general → hjxdl-0.0.4/hdl/utils/llm}/__init__.py +0 -0
  107. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/utils/llm/chat.py +0 -0
  108. {hjxdl-0.0.3/hdl/utils/llm → hjxdl-0.0.4/hdl/utils/schedulers}/__init__.py +0 -0
  109. {hjxdl-0.0.3 → hjxdl-0.0.4}/hdl/utils/schedulers/norm_lr.py +0 -0
  110. {hjxdl-0.0.3 → hjxdl-0.0.4}/hjxdl.egg-info/SOURCES.txt +0 -0
  111. {hjxdl-0.0.3 → hjxdl-0.0.4}/hjxdl.egg-info/dependency_links.txt +0 -0
  112. {hjxdl-0.0.3 → hjxdl-0.0.4}/hjxdl.egg-info/top_level.txt +0 -0
  113. {hjxdl-0.0.3 → hjxdl-0.0.4}/pyproject.toml +0 -0
  114. {hjxdl-0.0.3 → hjxdl-0.0.4}/setup.cfg +0 -0
  115. {hjxdl-0.0.3 → hjxdl-0.0.4}/setup.py +0 -0
  116. {hjxdl-0.0.3 → hjxdl-0.0.4}/update_main.sh +0 -0
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: hjxdl
3
- Version: 0.0.3
3
+ Version: 0.0.4
4
4
  Summary: A collection of functions for Jupyter notebooks
5
5
  Home-page: https://github.com/huluxiaohuowa/hdl
6
6
  Author: Jianxing Hu
@@ -0,0 +1 @@
1
+ from ._version import *
@@ -12,5 +12,5 @@ __version__: str
12
12
  __version_tuple__: VERSION_TUPLE
13
13
  version_tuple: VERSION_TUPLE
14
14
 
15
- __version__ = version = '0.0.3'
16
- __version_tuple__ = version_tuple = (0, 0, 3)
15
+ __version__ = version = '0.0.4'
16
+ __version_tuple__ = version_tuple = (0, 0, 4)
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: hjxdl
3
- Version: 0.0.3
3
+ Version: 0.0.4
4
4
  Summary: A collection of functions for Jupyter notebooks
5
5
  Home-page: https://github.com/huluxiaohuowa/hdl
6
6
  Author: Jianxing Hu
@@ -0,0 +1 @@
1
+ 0.0.4
File without changes
hjxdl-0.0.3/version.txt DELETED
@@ -1 +0,0 @@
1
- 0.0.3
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes