highlighter-sdk 0.5.0__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- highlighter_sdk-0.5.0/.gitignore +6 -0
- highlighter_sdk-0.5.0/LICENSE +201 -0
- highlighter_sdk-0.5.0/PKG-INFO +215 -0
- highlighter_sdk-0.5.0/README.md +177 -0
- highlighter_sdk-0.5.0/highlighter/__init__.py +18 -0
- highlighter_sdk-0.5.0/highlighter/_colors.py +83 -0
- highlighter_sdk-0.5.0/highlighter/assessments.py +52 -0
- highlighter_sdk-0.5.0/highlighter/aws_s3.py +326 -0
- highlighter_sdk-0.5.0/highlighter/base_models.py +472 -0
- highlighter_sdk-0.5.0/highlighter/capabilities.py +167 -0
- highlighter_sdk-0.5.0/highlighter/cli/__init__.py +0 -0
- highlighter_sdk-0.5.0/highlighter/cli/assessment.py +460 -0
- highlighter_sdk-0.5.0/highlighter/cli/common.py +47 -0
- highlighter_sdk-0.5.0/highlighter/cli/config.py +156 -0
- highlighter_sdk-0.5.0/highlighter/cli/data_files.py +264 -0
- highlighter_sdk-0.5.0/highlighter/cli/dataset.py +271 -0
- highlighter_sdk-0.5.0/highlighter/cli/experiment.py +62 -0
- highlighter_sdk-0.5.0/highlighter/cli/highlighter.py +128 -0
- highlighter_sdk-0.5.0/highlighter/cli/object_class.py +48 -0
- highlighter_sdk-0.5.0/highlighter/cli/step.py +68 -0
- highlighter_sdk-0.5.0/highlighter/cli/task.py +545 -0
- highlighter_sdk-0.5.0/highlighter/cli/training_run.py +302 -0
- highlighter_sdk-0.5.0/highlighter/const.py +26 -0
- highlighter_sdk-0.5.0/highlighter/cropping.py +254 -0
- highlighter_sdk-0.5.0/highlighter/data_files.py +97 -0
- highlighter_sdk-0.5.0/highlighter/datasets/__init__.py +69 -0
- highlighter_sdk-0.5.0/highlighter/datasets/base_models.py +275 -0
- highlighter_sdk-0.5.0/highlighter/datasets/dataset.py +1090 -0
- highlighter_sdk-0.5.0/highlighter/datasets/formats/__init__.py +27 -0
- highlighter_sdk-0.5.0/highlighter/datasets/formats/aws_s3/__init__.py +0 -0
- highlighter_sdk-0.5.0/highlighter/datasets/formats/aws_s3/writer.py +119 -0
- highlighter_sdk-0.5.0/highlighter/datasets/formats/coco/__init__.py +2 -0
- highlighter_sdk-0.5.0/highlighter/datasets/formats/coco/common.py +218 -0
- highlighter_sdk-0.5.0/highlighter/datasets/formats/coco/reader.py +130 -0
- highlighter_sdk-0.5.0/highlighter/datasets/formats/coco/writer.py +239 -0
- highlighter_sdk-0.5.0/highlighter/datasets/formats/highlighter/__init__.py +1 -0
- highlighter_sdk-0.5.0/highlighter/datasets/formats/highlighter/reader.py +128 -0
- highlighter_sdk-0.5.0/highlighter/datasets/formats/highlighter/writer.py +195 -0
- highlighter_sdk-0.5.0/highlighter/datasets/formats/torch_image_folder/__init__.py +0 -0
- highlighter_sdk-0.5.0/highlighter/datasets/formats/torch_image_folder/reader.py +86 -0
- highlighter_sdk-0.5.0/highlighter/datasets/formats/torch_image_folder/writer.py +231 -0
- highlighter_sdk-0.5.0/highlighter/datasets/interfaces.py +20 -0
- highlighter_sdk-0.5.0/highlighter/entity_avro_schema.py +156 -0
- highlighter_sdk-0.5.0/highlighter/gql_base.py +573 -0
- highlighter_sdk-0.5.0/highlighter/gql_client.py +413 -0
- highlighter_sdk-0.5.0/highlighter/io.py +420 -0
- highlighter_sdk-0.5.0/highlighter/itertools.py +16 -0
- highlighter_sdk-0.5.0/highlighter/labeled_uuid.py +89 -0
- highlighter_sdk-0.5.0/highlighter/logging.py +15 -0
- highlighter_sdk-0.5.0/highlighter/object_classes.py +74 -0
- highlighter_sdk-0.5.0/highlighter/pagination.py +67 -0
- highlighter_sdk-0.5.0/highlighter/presigned_url.py +44 -0
- highlighter_sdk-0.5.0/highlighter/splits/__init__.py +8 -0
- highlighter_sdk-0.5.0/highlighter/splits/random_split.py +36 -0
- highlighter_sdk-0.5.0/highlighter/tasks.py +30 -0
- highlighter_sdk-0.5.0/highlighter/training_config.py +332 -0
- highlighter_sdk-0.5.0/highlighter/training_runs.py +267 -0
- highlighter_sdk-0.5.0/highlighter/workflow.py +45 -0
- highlighter_sdk-0.5.0/pyproject.toml +139 -0
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Metadata-Version: 2.3
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Name: highlighter-sdk
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Version: 0.5.0
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Summary: Package to interact with the Highlighter Perception System
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Project-URL: Documentation, https://highlighter-docs.netlify.app/
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Author-email: Joshua Patterson <joshua.patterson@silverpond.com.au>, Jono Chang <jonathan.chang@silverpond.com.au>, Simon Hudson <simon.hudson@silverpond.com.au>
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License-File: LICENSE
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Keywords: enterprise perception system
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Classifier: Intended Audience :: Developers
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Classifier: License :: OSI Approved :: Apache Software License
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Classifier: Operating System :: Unix
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Classifier: Programming Language :: Python :: 3.7
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Classifier: Programming Language :: Python :: 3.8
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Classifier: Programming Language :: Python :: 3.9
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Classifier: Programming Language :: Python :: 3.10
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Requires-Python: <4.0,>=3.7
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Requires-Dist: boto3~=1.26.30
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Requires-Dist: jupyterlab~=3.2
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Requires-Dist: opencv-python~=4.7
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Requires-Dist: pandas~=1.0
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Requires-Dist: pydantic<2.0,>=1.6
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Requires-Dist: python-magic~=0.4.0
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Requires-Dist: pyyaml>=5.0
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Requires-Dist: requests-toolbelt
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Requires-Dist: requests~=2.22
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Requires-Dist: shapely>2.0.1
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Requires-Dist: tables~=3.7
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Requires-Dist: tqdm~=4.0
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Requires-Dist: websockets~=10.0
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Description-Content-Type: text/markdown
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+
|
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+
# Highlighter SDK
|
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+
|
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|
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The Highlighter SDK Python library provides convenient access to the [Highlighter](https://highlighter.ai) API from applications written in Python. There is also a CLI to access the Highlighter API in your shell.
|
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|
+
|
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+
The library also provides other features. For example:
|
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|
+
|
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+
* Easy configuration for fast setup and use across multiple Highlighter accounts.
|
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+
* Functions to help work with datasets from Highlighter
|
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+
* Helpers for pagination.
|
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+
|
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49
|
+
**For developer docs see: [here](docs/dev.md)**
|
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|
+
|
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|
+
# API Tokens, Environment Variables and Profiles
|
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+
|
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|
+
If you have just a single set of Highlighter credentials you can simply set
|
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|
+
the appropriate environment variables.
|
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55
|
+
|
|
56
|
+
```
|
|
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|
+
export HL_WEB_GRAPHQL_ENDPOINT="https://<client-account>.highlighter.ai/graphql"
|
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|
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export HL_WEB_GRAPHQL_API_TOKEN="###"
|
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+
|
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|
+
# Only required if you have datasets stored outside Highlighter's managed
|
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+
# aws s3 storage
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export AWS_ACCESS_KEY_ID=###
|
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+
export AWS_SECRET_ACCESS_KEY=###
|
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|
+
export AWS_DEFAULT_REGION=###
|
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|
+
```
|
|
66
|
+
|
|
67
|
+
If you have several Highlighter credentials we suggest you use the
|
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|
+
**profiles** option. You can create a `~/.highlighter-profiles.yaml` via the
|
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|
+
cli.
|
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|
+
|
|
71
|
+
```console
|
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+
hl config create --name my-profile --api-token ### --endpoint https://...
|
|
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|
+
```
|
|
74
|
+
|
|
75
|
+
Other commands for managing your profiles can be seen with the `--help` flag,
|
|
76
|
+
|
|
77
|
+
If you're a *Maverick Renegade* you can manage the `~/.highlighter-profiles.yaml`
|
|
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|
+
manually. Below is an example,
|
|
79
|
+
|
|
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|
+
```yaml
|
|
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|
+
# Example ~/.highlighter-profiles.yaml
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|
+
|
|
83
|
+
my_profile:
|
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|
+
endpoint_url: https://<client-account>.highlighter.ai/graphql
|
|
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|
+
api_token: ###
|
|
86
|
+
|
|
87
|
+
# Only required if you have datasets stored outside Highlighter's managed
|
|
88
|
+
# aws s3 storage
|
|
89
|
+
cloud:
|
|
90
|
+
- type: aws-s3
|
|
91
|
+
aws_access_key_id: ###
|
|
92
|
+
aws_secret_access_key: ###
|
|
93
|
+
aws_default_region: ###
|
|
94
|
+
```
|
|
95
|
+
|
|
96
|
+
To use as a profile in the cli simply use,
|
|
97
|
+
|
|
98
|
+
```console
|
|
99
|
+
hl --profile <profile-name> <command>
|
|
100
|
+
```
|
|
101
|
+
|
|
102
|
+
In a script you can use,
|
|
103
|
+
|
|
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|
+
```python
|
|
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|
+
# in a script
|
|
106
|
+
from highlighter import HLClient
|
|
107
|
+
|
|
108
|
+
client = HLClient.from_profile("profile-name")
|
|
109
|
+
```
|
|
110
|
+
|
|
111
|
+
Additionally `HLClient` can be initialized using environment variables or
|
|
112
|
+
by passing credentials direcly
|
|
113
|
+
|
|
114
|
+
```python
|
|
115
|
+
from highlighter import HLClient
|
|
116
|
+
|
|
117
|
+
client = HLClient.from_env()
|
|
118
|
+
|
|
119
|
+
# or
|
|
120
|
+
|
|
121
|
+
api_token = "###"
|
|
122
|
+
endpoint_url = "https://...highligher.ai/graphql
|
|
123
|
+
client = HLCient.from_credential(api_token, endpoint_url)
|
|
124
|
+
```
|
|
125
|
+
|
|
126
|
+
Finally, if you are in the position where you want to write a specified profile's
|
|
127
|
+
credentials to an evnironment file such as `.env` or `.envrc` you can use
|
|
128
|
+
the `write` command. This will create or append to the specified file.
|
|
129
|
+
|
|
130
|
+
```console
|
|
131
|
+
hl --profile my-profile write .envrc
|
|
132
|
+
```
|
|
133
|
+
|
|
134
|
+
## Python API
|
|
135
|
+
|
|
136
|
+
Once you have a `HLClient` object you can use it perform queries or mutations. Here is a simple example.
|
|
137
|
+
|
|
138
|
+
```python
|
|
139
|
+
from highlighter import HLClient
|
|
140
|
+
from pydantic import BaseModel
|
|
141
|
+
|
|
142
|
+
client = HLClient.from_env()
|
|
143
|
+
|
|
144
|
+
# You don't always need to define your own BaseModels
|
|
145
|
+
# many common BaseModels are defined in highlighter.base_models
|
|
146
|
+
# this is simply for completeness
|
|
147
|
+
class ObjectClassType(BaseModel):
|
|
148
|
+
id: int
|
|
149
|
+
name: str
|
|
150
|
+
|
|
151
|
+
id = 1234 # add an object class id from you account
|
|
152
|
+
|
|
153
|
+
result = client.ObjectClass(
|
|
154
|
+
return_type=ObjectClassType,
|
|
155
|
+
id=id,
|
|
156
|
+
)
|
|
157
|
+
|
|
158
|
+
print(result)
|
|
159
|
+
```
|
|
160
|
+
|
|
161
|
+
Some queries may return arbitrarily many results. These queries are
|
|
162
|
+
paginated and are called `Connections` and the queries are named accordingly.
|
|
163
|
+
We have provided a `paginate` function to help with these `Connections`
|
|
164
|
+
|
|
165
|
+
```python
|
|
166
|
+
from highlighter import HLClient, paginate
|
|
167
|
+
from pydantic import BaseModel
|
|
168
|
+
|
|
169
|
+
client = HLClient.from_env()
|
|
170
|
+
uuids = [
|
|
171
|
+
"abc123-abc123-abc123-abc123",
|
|
172
|
+
"xyz456-xyz456-xyz456-xyz456",
|
|
173
|
+
]
|
|
174
|
+
|
|
175
|
+
# The following BaseModels are all defined in
|
|
176
|
+
# highlighter.base_models. They are simply here
|
|
177
|
+
# for completeness
|
|
178
|
+
class PageInfo(BaseModel):
|
|
179
|
+
hasNextPage: bool
|
|
180
|
+
endCursor: Optional[str]
|
|
181
|
+
|
|
182
|
+
class ObjectClass(BaseModel):
|
|
183
|
+
id: str
|
|
184
|
+
uuid: str
|
|
185
|
+
name: str
|
|
186
|
+
|
|
187
|
+
class ObjectClassTypeConnection(BaseModel):
|
|
188
|
+
pageInfo: PageInfo
|
|
189
|
+
nodes: List[ObjectClass]
|
|
190
|
+
|
|
191
|
+
generator = paginate(
|
|
192
|
+
client..objectClassConnection,
|
|
193
|
+
ObjectClassTypeConnection,
|
|
194
|
+
uuid=uuids,
|
|
195
|
+
)
|
|
196
|
+
|
|
197
|
+
for object_class in generator:
|
|
198
|
+
print(object_class)
|
|
199
|
+
|
|
200
|
+
```
|
|
201
|
+
|
|
202
|
+
## Datasets
|
|
203
|
+
|
|
204
|
+
Highlighter SDK provides a dataset representation that can populated
|
|
205
|
+
from several sources `{HighlighterWeb.Assessments | Local files {.hdf, records.json, coco.json} | S3Bucket}`.
|
|
206
|
+
Once populated the `Highlighter.Datasets` object contains 2 `Pandas.DataFrames`
|
|
207
|
+
(`data_files_df` and `annotations_df`) that you can manipulate as required. When you're
|
|
208
|
+
ready you can write to disk or upload to Highligher using one of the `Writer` classes
|
|
209
|
+
to dump your data to disk in a format that can be consumed by your downstream code.
|
|
210
|
+
If you need you can also roll-your-own `Writer` by implementing the `highlighter.datasets.interfaces.IWriter` interface.
|
|
211
|
+
|
|
212
|
+
|
|
213
|
+
## Documentation
|
|
214
|
+
|
|
215
|
+
See https://highlighter-docs.netlify.app/
|
|
@@ -0,0 +1,177 @@
|
|
|
1
|
+
# Highlighter SDK
|
|
2
|
+
|
|
3
|
+
The Highlighter SDK Python library provides convenient access to the [Highlighter](https://highlighter.ai) API from applications written in Python. There is also a CLI to access the Highlighter API in your shell.
|
|
4
|
+
|
|
5
|
+
The library also provides other features. For example:
|
|
6
|
+
|
|
7
|
+
* Easy configuration for fast setup and use across multiple Highlighter accounts.
|
|
8
|
+
* Functions to help work with datasets from Highlighter
|
|
9
|
+
* Helpers for pagination.
|
|
10
|
+
|
|
11
|
+
**For developer docs see: [here](docs/dev.md)**
|
|
12
|
+
|
|
13
|
+
# API Tokens, Environment Variables and Profiles
|
|
14
|
+
|
|
15
|
+
If you have just a single set of Highlighter credentials you can simply set
|
|
16
|
+
the appropriate environment variables.
|
|
17
|
+
|
|
18
|
+
```
|
|
19
|
+
export HL_WEB_GRAPHQL_ENDPOINT="https://<client-account>.highlighter.ai/graphql"
|
|
20
|
+
export HL_WEB_GRAPHQL_API_TOKEN="###"
|
|
21
|
+
|
|
22
|
+
# Only required if you have datasets stored outside Highlighter's managed
|
|
23
|
+
# aws s3 storage
|
|
24
|
+
export AWS_ACCESS_KEY_ID=###
|
|
25
|
+
export AWS_SECRET_ACCESS_KEY=###
|
|
26
|
+
export AWS_DEFAULT_REGION=###
|
|
27
|
+
```
|
|
28
|
+
|
|
29
|
+
If you have several Highlighter credentials we suggest you use the
|
|
30
|
+
**profiles** option. You can create a `~/.highlighter-profiles.yaml` via the
|
|
31
|
+
cli.
|
|
32
|
+
|
|
33
|
+
```console
|
|
34
|
+
hl config create --name my-profile --api-token ### --endpoint https://...
|
|
35
|
+
```
|
|
36
|
+
|
|
37
|
+
Other commands for managing your profiles can be seen with the `--help` flag,
|
|
38
|
+
|
|
39
|
+
If you're a *Maverick Renegade* you can manage the `~/.highlighter-profiles.yaml`
|
|
40
|
+
manually. Below is an example,
|
|
41
|
+
|
|
42
|
+
```yaml
|
|
43
|
+
# Example ~/.highlighter-profiles.yaml
|
|
44
|
+
|
|
45
|
+
my_profile:
|
|
46
|
+
endpoint_url: https://<client-account>.highlighter.ai/graphql
|
|
47
|
+
api_token: ###
|
|
48
|
+
|
|
49
|
+
# Only required if you have datasets stored outside Highlighter's managed
|
|
50
|
+
# aws s3 storage
|
|
51
|
+
cloud:
|
|
52
|
+
- type: aws-s3
|
|
53
|
+
aws_access_key_id: ###
|
|
54
|
+
aws_secret_access_key: ###
|
|
55
|
+
aws_default_region: ###
|
|
56
|
+
```
|
|
57
|
+
|
|
58
|
+
To use as a profile in the cli simply use,
|
|
59
|
+
|
|
60
|
+
```console
|
|
61
|
+
hl --profile <profile-name> <command>
|
|
62
|
+
```
|
|
63
|
+
|
|
64
|
+
In a script you can use,
|
|
65
|
+
|
|
66
|
+
```python
|
|
67
|
+
# in a script
|
|
68
|
+
from highlighter import HLClient
|
|
69
|
+
|
|
70
|
+
client = HLClient.from_profile("profile-name")
|
|
71
|
+
```
|
|
72
|
+
|
|
73
|
+
Additionally `HLClient` can be initialized using environment variables or
|
|
74
|
+
by passing credentials direcly
|
|
75
|
+
|
|
76
|
+
```python
|
|
77
|
+
from highlighter import HLClient
|
|
78
|
+
|
|
79
|
+
client = HLClient.from_env()
|
|
80
|
+
|
|
81
|
+
# or
|
|
82
|
+
|
|
83
|
+
api_token = "###"
|
|
84
|
+
endpoint_url = "https://...highligher.ai/graphql
|
|
85
|
+
client = HLCient.from_credential(api_token, endpoint_url)
|
|
86
|
+
```
|
|
87
|
+
|
|
88
|
+
Finally, if you are in the position where you want to write a specified profile's
|
|
89
|
+
credentials to an evnironment file such as `.env` or `.envrc` you can use
|
|
90
|
+
the `write` command. This will create or append to the specified file.
|
|
91
|
+
|
|
92
|
+
```console
|
|
93
|
+
hl --profile my-profile write .envrc
|
|
94
|
+
```
|
|
95
|
+
|
|
96
|
+
## Python API
|
|
97
|
+
|
|
98
|
+
Once you have a `HLClient` object you can use it perform queries or mutations. Here is a simple example.
|
|
99
|
+
|
|
100
|
+
```python
|
|
101
|
+
from highlighter import HLClient
|
|
102
|
+
from pydantic import BaseModel
|
|
103
|
+
|
|
104
|
+
client = HLClient.from_env()
|
|
105
|
+
|
|
106
|
+
# You don't always need to define your own BaseModels
|
|
107
|
+
# many common BaseModels are defined in highlighter.base_models
|
|
108
|
+
# this is simply for completeness
|
|
109
|
+
class ObjectClassType(BaseModel):
|
|
110
|
+
id: int
|
|
111
|
+
name: str
|
|
112
|
+
|
|
113
|
+
id = 1234 # add an object class id from you account
|
|
114
|
+
|
|
115
|
+
result = client.ObjectClass(
|
|
116
|
+
return_type=ObjectClassType,
|
|
117
|
+
id=id,
|
|
118
|
+
)
|
|
119
|
+
|
|
120
|
+
print(result)
|
|
121
|
+
```
|
|
122
|
+
|
|
123
|
+
Some queries may return arbitrarily many results. These queries are
|
|
124
|
+
paginated and are called `Connections` and the queries are named accordingly.
|
|
125
|
+
We have provided a `paginate` function to help with these `Connections`
|
|
126
|
+
|
|
127
|
+
```python
|
|
128
|
+
from highlighter import HLClient, paginate
|
|
129
|
+
from pydantic import BaseModel
|
|
130
|
+
|
|
131
|
+
client = HLClient.from_env()
|
|
132
|
+
uuids = [
|
|
133
|
+
"abc123-abc123-abc123-abc123",
|
|
134
|
+
"xyz456-xyz456-xyz456-xyz456",
|
|
135
|
+
]
|
|
136
|
+
|
|
137
|
+
# The following BaseModels are all defined in
|
|
138
|
+
# highlighter.base_models. They are simply here
|
|
139
|
+
# for completeness
|
|
140
|
+
class PageInfo(BaseModel):
|
|
141
|
+
hasNextPage: bool
|
|
142
|
+
endCursor: Optional[str]
|
|
143
|
+
|
|
144
|
+
class ObjectClass(BaseModel):
|
|
145
|
+
id: str
|
|
146
|
+
uuid: str
|
|
147
|
+
name: str
|
|
148
|
+
|
|
149
|
+
class ObjectClassTypeConnection(BaseModel):
|
|
150
|
+
pageInfo: PageInfo
|
|
151
|
+
nodes: List[ObjectClass]
|
|
152
|
+
|
|
153
|
+
generator = paginate(
|
|
154
|
+
client..objectClassConnection,
|
|
155
|
+
ObjectClassTypeConnection,
|
|
156
|
+
uuid=uuids,
|
|
157
|
+
)
|
|
158
|
+
|
|
159
|
+
for object_class in generator:
|
|
160
|
+
print(object_class)
|
|
161
|
+
|
|
162
|
+
```
|
|
163
|
+
|
|
164
|
+
## Datasets
|
|
165
|
+
|
|
166
|
+
Highlighter SDK provides a dataset representation that can populated
|
|
167
|
+
from several sources `{HighlighterWeb.Assessments | Local files {.hdf, records.json, coco.json} | S3Bucket}`.
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Once populated the `Highlighter.Datasets` object contains 2 `Pandas.DataFrames`
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(`data_files_df` and `annotations_df`) that you can manipulate as required. When you're
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ready you can write to disk or upload to Highligher using one of the `Writer` classes
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to dump your data to disk in a format that can be consumed by your downstream code.
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If you need you can also roll-your-own `Writer` by implementing the `highlighter.datasets.interfaces.IWriter` interface.
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## Documentation
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See https://highlighter-docs.netlify.app/
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# isort: skip_file
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from highlighter.const import *
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from highlighter.base_models import *
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from highlighter.gql_client import HLClient
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from highlighter.entity_avro_schema import *
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from highlighter.data_files import *
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from highlighter.labeled_uuid import *
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from highlighter.object_classes import *
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from highlighter.pagination import paginate
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from highlighter.presigned_url import *
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from highlighter.assessments import *
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from highlighter.tasks import *
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from highlighter.training_runs import *
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from highlighter import io
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from highlighter.capabilities import *
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from highlighter.workflow import *
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