haplohub-cli 3.2.1__tar.gz → 3.2.2__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/.github/workflows/on_pr.yml +1 -1
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/.github/workflows/on_push_main.yml +1 -1
- {haplohub_cli-3.2.1/haplohub_cli.egg-info → haplohub_cli-3.2.2}/PKG-INFO +2 -1
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/_version.py +3 -3
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/core/api/client.py +3 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2/haplohub_cli.egg-info}/PKG-INFO +2 -1
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli.egg-info/requires.txt +1 -0
- haplohub_cli-3.2.2/haplohub_cli.egg-info/scm_version.json +8 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/pyproject.toml +1 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/uv.lock +404 -402
- haplohub_cli-3.2.1/haplohub_cli.egg-info/scm_version.json +0 -8
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/.github/dependabot.yml +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/.gitignore +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/.pre-commit-config.yaml +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/AGENTS.md +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/CLAUDE.md +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/README.md +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/docs/index.md +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/docs/release.md +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/docs/sdk-coupling.md +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/docs/stage-verification.md +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/docs/testing.md +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/__init__.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/auth/__init__.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/auth/auth.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/auth/auth_web_server.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/auth/oauth_client.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/auth/tests/__init__.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/auth/tests/test_auth_web_server.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/auth/tests/test_token_storage.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/auth/token_storage.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/cli.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/commands/__init__.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/commands/algorithm/__init__.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/commands/algorithm/result/__init__.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/commands/algorithm/tests/__init__.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/commands/algorithm/tests/test_result_create.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/commands/cohort/__init__.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/commands/cohort/biomarker.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/commands/cohort/member/__init__.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/commands/cohort/member/report.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/commands/cohort/sample.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/commands/cohort/tests/__init__.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/commands/cohort/tests/test_delete.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/commands/config.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/commands/file.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/commands/login.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/commands/metadata/__init__.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/commands/tests/__init__.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/commands/tests/test_file.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/commands/variant.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/commands/version.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/config/__init__.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/config/config.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/config/config_manager.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/core/__init__.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/core/api/__init__.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/core/checksum.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/core/deletion.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/core/network.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/core/slug.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/core/tests/__init__.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/core/tests/test_checksum.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/core/tests/test_network.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/core/tests/test_slug.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/core/types.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/core/upload.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/formatters/__init__.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/formatters/algorithm.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/formatters/algorithm_result.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/formatters/biomarker.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/formatters/config.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/formatters/decorators.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/formatters/file.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/formatters/formatter_registry.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/formatters/generic.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/formatters/generic_table.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/formatters/tests/__init__.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/formatters/tests/test_generic_table.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/formatters/utils.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/formatters/variant.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/settings.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/tests/__init__.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/tests/test_cli.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/types/__init__.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli/types/variant_range.py +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli.egg-info/SOURCES.txt +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli.egg-info/dependency_links.txt +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli.egg-info/entry_points.txt +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli.egg-info/scm_file_list.json +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/haplohub_cli.egg-info/top_level.txt +0 -0
- {haplohub_cli-3.2.1 → haplohub_cli-3.2.2}/setup.cfg +0 -0
|
@@ -1,10 +1,11 @@
|
|
|
1
1
|
Metadata-Version: 2.4
|
|
2
2
|
Name: haplohub-cli
|
|
3
|
-
Version: 3.2.
|
|
3
|
+
Version: 3.2.2
|
|
4
4
|
Summary: HaploHub Command Line Interface
|
|
5
5
|
Author-email: Mike Polcari <mike@haplotype-labs.com>, Ilya Khrustalev <ilya@haplotype-labs.com>
|
|
6
6
|
Requires-Python: >=3.10
|
|
7
7
|
Description-Content-Type: text/markdown
|
|
8
|
+
Requires-Dist: certifi>=2026.10.19
|
|
8
9
|
Requires-Dist: click>=8.1.8
|
|
9
10
|
Requires-Dist: haplohub<4,>=3.1.0
|
|
10
11
|
Requires-Dist: pendulum>=3.0.0
|
|
@@ -18,7 +18,7 @@ version_tuple: tuple[int | str, ...]
|
|
|
18
18
|
commit_id: str | None
|
|
19
19
|
__commit_id__: str | None
|
|
20
20
|
|
|
21
|
-
__version__ = version = '3.2.
|
|
22
|
-
__version_tuple__ = version_tuple = (3, 2,
|
|
21
|
+
__version__ = version = '3.2.2'
|
|
22
|
+
__version_tuple__ = version_tuple = (3, 2, 2)
|
|
23
23
|
|
|
24
|
-
__commit_id__ = commit_id = '
|
|
24
|
+
__commit_id__ = commit_id = 'g9bab1d8f9'
|
|
@@ -1,5 +1,6 @@
|
|
|
1
1
|
from functools import cached_property
|
|
2
2
|
|
|
3
|
+
import certifi
|
|
3
4
|
import click
|
|
4
5
|
from haplohub import ApiClient, Configuration
|
|
5
6
|
|
|
@@ -22,11 +23,13 @@ class Client:
|
|
|
22
23
|
config = Configuration(
|
|
23
24
|
host=api_url,
|
|
24
25
|
api_key={"ApiKeyAuth": self.token_storage.get_api_key(api_url)},
|
|
26
|
+
ssl_ca_cert=certifi.where(),
|
|
25
27
|
)
|
|
26
28
|
else:
|
|
27
29
|
config = Configuration(
|
|
28
30
|
host=api_url,
|
|
29
31
|
access_token=self.token_storage.get_access_token(api_url),
|
|
32
|
+
ssl_ca_cert=certifi.where(),
|
|
30
33
|
)
|
|
31
34
|
return ApiClient(config)
|
|
32
35
|
|
|
@@ -1,10 +1,11 @@
|
|
|
1
1
|
Metadata-Version: 2.4
|
|
2
2
|
Name: haplohub-cli
|
|
3
|
-
Version: 3.2.
|
|
3
|
+
Version: 3.2.2
|
|
4
4
|
Summary: HaploHub Command Line Interface
|
|
5
5
|
Author-email: Mike Polcari <mike@haplotype-labs.com>, Ilya Khrustalev <ilya@haplotype-labs.com>
|
|
6
6
|
Requires-Python: >=3.10
|
|
7
7
|
Description-Content-Type: text/markdown
|
|
8
|
+
Requires-Dist: certifi>=2026.10.19
|
|
8
9
|
Requires-Dist: click>=8.1.8
|
|
9
10
|
Requires-Dist: haplohub<4,>=3.1.0
|
|
10
11
|
Requires-Dist: pendulum>=3.0.0
|