hafnia 0.2.1__tar.gz → 0.2.3__tar.gz

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Files changed (125) hide show
  1. {hafnia-0.2.1 → hafnia-0.2.3}/.github/workflows/publish_docker.yaml +1 -1
  2. {hafnia-0.2.1 → hafnia-0.2.3}/PKG-INFO +1 -1
  3. {hafnia-0.2.1 → hafnia-0.2.3}/examples/example_dataset_recipe.py +15 -11
  4. {hafnia-0.2.1 → hafnia-0.2.3}/examples/example_hafnia_dataset.py +26 -16
  5. {hafnia-0.2.1 → hafnia-0.2.3}/pyproject.toml +1 -1
  6. {hafnia-0.2.1 → hafnia-0.2.3}/src/cli/__main__.py +6 -10
  7. {hafnia-0.2.1 → hafnia-0.2.3}/src/cli/config.py +19 -5
  8. {hafnia-0.2.1 → hafnia-0.2.3}/src/cli/profile_cmds.py +2 -1
  9. {hafnia-0.2.1 → hafnia-0.2.3}/src/hafnia/dataset/dataset_helpers.py +39 -6
  10. {hafnia-0.2.1 → hafnia-0.2.3}/src/hafnia/dataset/dataset_recipe/dataset_recipe.py +59 -1
  11. {hafnia-0.2.1 → hafnia-0.2.3}/src/hafnia/dataset/dataset_recipe/recipe_types.py +4 -0
  12. {hafnia-0.2.1 → hafnia-0.2.3}/src/hafnia/dataset/hafnia_dataset.py +7 -21
  13. {hafnia-0.2.1 → hafnia-0.2.3}/src/hafnia/platform/datasets.py +12 -5
  14. {hafnia-0.2.1 → hafnia-0.2.3}/tests/conftest.py +1 -1
  15. {hafnia-0.2.1 → hafnia-0.2.3}/tests/dataset/dataset_recipe/test_dataset_recipes.py +47 -4
  16. {hafnia-0.2.1 → hafnia-0.2.3}/tests/dataset/dataset_recipe/test_recipe_transformations.py +1 -1
  17. hafnia-0.2.3/tests/dataset/operations/test_dataset_transformations.py +0 -0
  18. {hafnia-0.2.1 → hafnia-0.2.3}/tests/dataset/operations/test_table_transformations.py +1 -1
  19. {hafnia-0.2.1 → hafnia-0.2.3}/tests/dataset/test_dataset_helpers.py +10 -5
  20. {hafnia-0.2.1 → hafnia-0.2.3}/tests/dataset/test_hafnia_dataset.py +1 -1
  21. {hafnia-0.2.1/src/hafnia → hafnia-0.2.3/tests}/helper_testing.py +1 -1
  22. {hafnia-0.2.1 → hafnia-0.2.3}/tests/test_check_example_scripts.py +1 -1
  23. {hafnia-0.2.1 → hafnia-0.2.3}/tests/test_cli.py +38 -1
  24. {hafnia-0.2.1 → hafnia-0.2.3}/tests/test_samples.py +8 -1
  25. {hafnia-0.2.1 → hafnia-0.2.3}/tests/test_visualizations.py +2 -1
  26. {hafnia-0.2.1 → hafnia-0.2.3}/uv.lock +1 -1
  27. {hafnia-0.2.1 → hafnia-0.2.3}/.devcontainer/devcontainer.json +0 -0
  28. {hafnia-0.2.1 → hafnia-0.2.3}/.devcontainer/hooks/post_create +0 -0
  29. {hafnia-0.2.1 → hafnia-0.2.3}/.github/dependabot.yaml +0 -0
  30. {hafnia-0.2.1 → hafnia-0.2.3}/.github/workflows/Dockerfile +0 -0
  31. {hafnia-0.2.1 → hafnia-0.2.3}/.github/workflows/build.yaml +0 -0
  32. {hafnia-0.2.1 → hafnia-0.2.3}/.github/workflows/check_release.yaml +0 -0
  33. {hafnia-0.2.1 → hafnia-0.2.3}/.github/workflows/ci_cd.yaml +0 -0
  34. {hafnia-0.2.1 → hafnia-0.2.3}/.github/workflows/lint.yaml +0 -0
  35. {hafnia-0.2.1 → hafnia-0.2.3}/.github/workflows/publish_pypi.yaml +0 -0
  36. {hafnia-0.2.1 → hafnia-0.2.3}/.github/workflows/tests.yaml +0 -0
  37. {hafnia-0.2.1 → hafnia-0.2.3}/.gitignore +0 -0
  38. {hafnia-0.2.1 → hafnia-0.2.3}/.pre-commit-config.yaml +0 -0
  39. {hafnia-0.2.1 → hafnia-0.2.3}/.python-version +0 -0
  40. {hafnia-0.2.1 → hafnia-0.2.3}/.vscode/extensions.json +0 -0
  41. {hafnia-0.2.1 → hafnia-0.2.3}/.vscode/launch.json +0 -0
  42. {hafnia-0.2.1 → hafnia-0.2.3}/.vscode/settings.json +0 -0
  43. {hafnia-0.2.1 → hafnia-0.2.3}/LICENSE +0 -0
  44. {hafnia-0.2.1 → hafnia-0.2.3}/README.md +0 -0
  45. {hafnia-0.2.1 → hafnia-0.2.3}/docs/cli.md +0 -0
  46. {hafnia-0.2.1 → hafnia-0.2.3}/docs/release.md +0 -0
  47. {hafnia-0.2.1 → hafnia-0.2.3}/examples/example_logger.py +0 -0
  48. {hafnia-0.2.1 → hafnia-0.2.3}/examples/example_torchvision_dataloader.py +0 -0
  49. {hafnia-0.2.1 → hafnia-0.2.3}/src/cli/__init__.py +0 -0
  50. {hafnia-0.2.1 → hafnia-0.2.3}/src/cli/consts.py +0 -0
  51. {hafnia-0.2.1 → hafnia-0.2.3}/src/cli/dataset_cmds.py +0 -0
  52. {hafnia-0.2.1 → hafnia-0.2.3}/src/cli/experiment_cmds.py +0 -0
  53. {hafnia-0.2.1 → hafnia-0.2.3}/src/cli/recipe_cmds.py +0 -0
  54. {hafnia-0.2.1 → hafnia-0.2.3}/src/cli/runc_cmds.py +0 -0
  55. {hafnia-0.2.1 → hafnia-0.2.3}/src/hafnia/__init__.py +0 -0
  56. {hafnia-0.2.1 → hafnia-0.2.3}/src/hafnia/data/__init__.py +0 -0
  57. {hafnia-0.2.1 → hafnia-0.2.3}/src/hafnia/data/factory.py +0 -0
  58. {hafnia-0.2.1 → hafnia-0.2.3}/src/hafnia/dataset/dataset_names.py +0 -0
  59. {hafnia-0.2.1 → hafnia-0.2.3}/src/hafnia/dataset/dataset_recipe/recipe_transforms.py +0 -0
  60. {hafnia-0.2.1 → hafnia-0.2.3}/src/hafnia/dataset/dataset_upload_helper.py +0 -0
  61. {hafnia-0.2.1 → hafnia-0.2.3}/src/hafnia/dataset/operations/dataset_stats.py +0 -0
  62. {hafnia-0.2.1 → hafnia-0.2.3}/src/hafnia/dataset/operations/dataset_transformations.py +0 -0
  63. {hafnia-0.2.1 → hafnia-0.2.3}/src/hafnia/dataset/operations/table_transformations.py +0 -0
  64. {hafnia-0.2.1 → hafnia-0.2.3}/src/hafnia/dataset/primitives/__init__.py +0 -0
  65. {hafnia-0.2.1 → hafnia-0.2.3}/src/hafnia/dataset/primitives/bbox.py +0 -0
  66. {hafnia-0.2.1 → hafnia-0.2.3}/src/hafnia/dataset/primitives/bitmask.py +0 -0
  67. {hafnia-0.2.1 → hafnia-0.2.3}/src/hafnia/dataset/primitives/classification.py +0 -0
  68. {hafnia-0.2.1 → hafnia-0.2.3}/src/hafnia/dataset/primitives/point.py +0 -0
  69. {hafnia-0.2.1 → hafnia-0.2.3}/src/hafnia/dataset/primitives/polygon.py +0 -0
  70. {hafnia-0.2.1 → hafnia-0.2.3}/src/hafnia/dataset/primitives/primitive.py +0 -0
  71. {hafnia-0.2.1 → hafnia-0.2.3}/src/hafnia/dataset/primitives/segmentation.py +0 -0
  72. {hafnia-0.2.1 → hafnia-0.2.3}/src/hafnia/dataset/primitives/utils.py +0 -0
  73. {hafnia-0.2.1 → hafnia-0.2.3}/src/hafnia/experiment/__init__.py +0 -0
  74. {hafnia-0.2.1 → hafnia-0.2.3}/src/hafnia/experiment/hafnia_logger.py +0 -0
  75. {hafnia-0.2.1 → hafnia-0.2.3}/src/hafnia/http.py +0 -0
  76. {hafnia-0.2.1 → hafnia-0.2.3}/src/hafnia/log.py +0 -0
  77. {hafnia-0.2.1 → hafnia-0.2.3}/src/hafnia/platform/__init__.py +0 -0
  78. {hafnia-0.2.1 → hafnia-0.2.3}/src/hafnia/platform/builder.py +0 -0
  79. {hafnia-0.2.1 → hafnia-0.2.3}/src/hafnia/platform/download.py +0 -0
  80. {hafnia-0.2.1 → hafnia-0.2.3}/src/hafnia/platform/experiment.py +0 -0
  81. {hafnia-0.2.1 → hafnia-0.2.3}/src/hafnia/torch_helpers.py +0 -0
  82. {hafnia-0.2.1 → hafnia-0.2.3}/src/hafnia/utils.py +0 -0
  83. {hafnia-0.2.1 → hafnia-0.2.3}/src/hafnia/visualizations/colors.py +0 -0
  84. {hafnia-0.2.1 → hafnia-0.2.3}/src/hafnia/visualizations/image_visualizations.py +0 -0
  85. /hafnia-0.2.1/tests/dataset/operations/test_dataset_transformations.py → /hafnia-0.2.3/tests/__init__.py +0 -0
  86. {hafnia-0.2.1 → hafnia-0.2.3}/tests/data/expected_images/test_samples/test_check_dataset[caltech-101].png +0 -0
  87. {hafnia-0.2.1 → hafnia-0.2.3}/tests/data/expected_images/test_samples/test_check_dataset[caltech-256].png +0 -0
  88. {hafnia-0.2.1 → hafnia-0.2.3}/tests/data/expected_images/test_samples/test_check_dataset[cifar100].png +0 -0
  89. {hafnia-0.2.1 → hafnia-0.2.3}/tests/data/expected_images/test_samples/test_check_dataset[cifar10].png +0 -0
  90. {hafnia-0.2.1 → hafnia-0.2.3}/tests/data/expected_images/test_samples/test_check_dataset[coco-2017].png +0 -0
  91. {hafnia-0.2.1 → hafnia-0.2.3}/tests/data/expected_images/test_samples/test_check_dataset[midwest-vehicle-detection].png +0 -0
  92. {hafnia-0.2.1 → hafnia-0.2.3}/tests/data/expected_images/test_samples/test_check_dataset[mnist].png +0 -0
  93. {hafnia-0.2.1 → hafnia-0.2.3}/tests/data/expected_images/test_samples/test_check_dataset[tiny-dataset].png +0 -0
  94. {hafnia-0.2.1 → hafnia-0.2.3}/tests/data/expected_images/test_samples/test_dataset_draw_image_and_target[caltech-101].png +0 -0
  95. {hafnia-0.2.1 → hafnia-0.2.3}/tests/data/expected_images/test_samples/test_dataset_draw_image_and_target[caltech-256].png +0 -0
  96. {hafnia-0.2.1 → hafnia-0.2.3}/tests/data/expected_images/test_samples/test_dataset_draw_image_and_target[cifar100].png +0 -0
  97. {hafnia-0.2.1 → hafnia-0.2.3}/tests/data/expected_images/test_samples/test_dataset_draw_image_and_target[cifar10].png +0 -0
  98. {hafnia-0.2.1 → hafnia-0.2.3}/tests/data/expected_images/test_samples/test_dataset_draw_image_and_target[coco-2017].png +0 -0
  99. {hafnia-0.2.1 → hafnia-0.2.3}/tests/data/expected_images/test_samples/test_dataset_draw_image_and_target[midwest-vehicle-detection].png +0 -0
  100. {hafnia-0.2.1 → hafnia-0.2.3}/tests/data/expected_images/test_samples/test_dataset_draw_image_and_target[mnist].png +0 -0
  101. {hafnia-0.2.1 → hafnia-0.2.3}/tests/data/expected_images/test_samples/test_dataset_draw_image_and_target[tiny-dataset].png +0 -0
  102. {hafnia-0.2.1 → hafnia-0.2.3}/tests/data/expected_images/test_visualizations/test_blur_anonymization[coco-2017].png +0 -0
  103. {hafnia-0.2.1 → hafnia-0.2.3}/tests/data/expected_images/test_visualizations/test_blur_anonymization[tiny-dataset].png +0 -0
  104. {hafnia-0.2.1 → hafnia-0.2.3}/tests/data/expected_images/test_visualizations/test_draw_annotations[coco-2017].png +0 -0
  105. {hafnia-0.2.1 → hafnia-0.2.3}/tests/data/expected_images/test_visualizations/test_draw_annotations[tiny-dataset].png +0 -0
  106. {hafnia-0.2.1 → hafnia-0.2.3}/tests/data/expected_images/test_visualizations/test_mask_region[coco-2017].png +0 -0
  107. {hafnia-0.2.1 → hafnia-0.2.3}/tests/data/expected_images/test_visualizations/test_mask_region[tiny-dataset].png +0 -0
  108. {hafnia-0.2.1 → hafnia-0.2.3}/tests/data/micro_test_datasets/coco-2017/annotations.jsonl +0 -0
  109. {hafnia-0.2.1 → hafnia-0.2.3}/tests/data/micro_test_datasets/coco-2017/annotations.parquet +0 -0
  110. {hafnia-0.2.1 → hafnia-0.2.3}/tests/data/micro_test_datasets/coco-2017/data/182a2c0a3ce312cf.jpg +0 -0
  111. {hafnia-0.2.1 → hafnia-0.2.3}/tests/data/micro_test_datasets/coco-2017/data/4e95c6eb6209880a.jpg +0 -0
  112. {hafnia-0.2.1 → hafnia-0.2.3}/tests/data/micro_test_datasets/coco-2017/data/cf86c7a23edb55ce.jpg +0 -0
  113. {hafnia-0.2.1 → hafnia-0.2.3}/tests/data/micro_test_datasets/coco-2017/dataset_info.json +0 -0
  114. {hafnia-0.2.1 → hafnia-0.2.3}/tests/data/micro_test_datasets/tiny-dataset/annotations.jsonl +0 -0
  115. {hafnia-0.2.1 → hafnia-0.2.3}/tests/data/micro_test_datasets/tiny-dataset/annotations.parquet +0 -0
  116. {hafnia-0.2.1 → hafnia-0.2.3}/tests/data/micro_test_datasets/tiny-dataset/data/222bbd5721a8a86e.png +0 -0
  117. {hafnia-0.2.1 → hafnia-0.2.3}/tests/data/micro_test_datasets/tiny-dataset/data/3251d85443622e4c.png +0 -0
  118. {hafnia-0.2.1 → hafnia-0.2.3}/tests/data/micro_test_datasets/tiny-dataset/data/3657ababa44af9b6.png +0 -0
  119. {hafnia-0.2.1 → hafnia-0.2.3}/tests/data/micro_test_datasets/tiny-dataset/dataset_info.json +0 -0
  120. {hafnia-0.2.1 → hafnia-0.2.3}/tests/dataset/dataset_recipe/test_dataset_recipe_helpers.py +0 -0
  121. {hafnia-0.2.1 → hafnia-0.2.3}/tests/dataset/test_colors.py +0 -0
  122. {hafnia-0.2.1 → hafnia-0.2.3}/tests/dataset/test_shape_primitives.py +0 -0
  123. {hafnia-0.2.1 → hafnia-0.2.3}/tests/test_builder.py +0 -0
  124. {hafnia-0.2.1 → hafnia-0.2.3}/tests/test_hafnia_logger.py +0 -0
  125. {hafnia-0.2.1 → hafnia-0.2.3}/tests/test_utils.py +0 -0
@@ -47,7 +47,7 @@ jobs:
47
47
  echo "aws_region=${{ secrets.STAGE_AWS_REGION }}" >> $GITHUB_OUTPUT
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48
  fi
49
49
  - name: Configure AWS credentials
50
- uses: aws-actions/configure-aws-credentials@v4.2.1
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+ uses: aws-actions/configure-aws-credentials@v4.3.0
51
51
  with:
52
52
  role-to-assume: arn:aws:iam::${{ steps.env-vars.outputs.aws_account_id }}:role/${{ secrets.AWS_ROLE_NAME }}
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53
  aws-region: ${{ steps.env-vars.outputs.aws_region }}
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: hafnia
3
- Version: 0.2.1
3
+ Version: 0.2.3
4
4
  Summary: Python SDK for communication with Hafnia platform.
5
5
  Author-email: Milestone Systems <hafniaplatform@milestone.dk>
6
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  License-File: LICENSE
@@ -29,20 +29,24 @@ dataset_recipe = DatasetRecipe.from_name(name="mnist").shuffle().select_samples(
29
29
  dataset = dataset_recipe.build()
30
30
  # Note that the interface is similar, but to actually create the dataset you need to call `build()` on the recipe.
31
31
 
32
- # An important feature of a 'DatasetRecipe' is that the recipe itself - and not the dataset - can be saved as a file
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- # and loaded from file. Meaning you can easily save, share, load and build the dataset later or in a different
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- # environment.
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- # In programming language, the recipe can be serialized to JSON and deserialized back to the original python object
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- # recipe.
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+ # Unlike the HafniaDataset, a DatasetRecipe does not execute operations. It only registers
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+ # the operations applied to the recipe and can be used to build the dataset later.
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+ # You can print the dataset recipe to the operations that were applied to it.
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+ rprint(dataset_recipe)
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+
37
+ # Or as a JSON string:
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+ json_str: str = dataset_recipe.as_json_str()
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+ rprint(json_str)
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+
41
+ # This is an important feature of a 'DatasetRecipe' it only registers operations and that the recipe itself
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+ # - and not the dataset - can be saved as a file and loaded from file.
43
+ # Meaning you can easily save, share, load and build the dataset later or in a different environment.
37
44
  # For TaaS, this is the only way to include multiple datasets during training.
38
45
 
39
- # This is how it looks like in practice:
40
- # 1) Save the dataset recipe to a file
41
- path_json = Path(".data/tmp/dataset_recipe.json")
42
- dataset_recipe.as_json_file(path_json)
43
46
 
44
- # 2) The recipe can be loaded from the file
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- dataset_recipe_again = DatasetRecipe.from_json_file(path_json)
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+ # 2) The recipe can be loaded from json string
48
+ dataset_recipe_again: DatasetRecipe = DatasetRecipe.from_json_str(json_str)
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+ # dataset_recipe_again.build()
46
50
 
47
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  # We can verify that the loaded recipe is the same as the original recipe.
48
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  assert dataset_recipe_again == dataset_recipe
@@ -26,11 +26,10 @@ dataset = HafniaDataset.from_path(path_dataset)
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  # Alternatively, you can use the 'load_dataset' function
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  dataset = load_dataset("midwest-vehicle-detection")
28
28
 
29
-
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  # Dataset information is stored in 'dataset.info'
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  rprint(dataset.info)
32
31
 
33
- # Annotations are stored in 'dataset.table' as a Polars DataFrame
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+ # Annotations are stored in 'dataset.samples' as a Polars DataFrame
34
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  dataset.samples.head(2)
35
34
 
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  # Print dataset information
@@ -49,14 +48,29 @@ shuffled_dataset = dataset.shuffle(seed=42) # Shuffle the dataset
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  split_ratios = {SplitName.TRAIN: 0.8, SplitName.VAL: 0.1, SplitName.TEST: 0.1}
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  new_dataset_splits = dataset.splits_by_ratios(split_ratios)
51
50
 
51
+ # Support Chaining Operations (load, shuffle, select samples)
52
+ dataset = load_dataset("midwest-vehicle-detection").shuffle(seed=42).select_samples(n_samples=10)
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+
54
+
52
55
  # Write dataset to disk
53
56
  path_tmp = Path(".data/tmp")
54
57
  path_dataset = path_tmp / "hafnia_dataset"
55
- dataset.write(path_dataset) # --> Check that data is human readable
58
+ dataset.write(path_dataset)
56
59
 
57
60
  # Load dataset from disk
58
61
  dataset_again = HafniaDataset.from_path(path_dataset)
59
62
 
63
+
64
+ # Want custom dataset transformations or statistics? Use the polars table (dataset.samples) directly
65
+ n_objects = dataset.samples["objects"].list.len().sum()
66
+ n_objects = dataset.samples[Bbox.column_name()].list.len().sum() # Use Bbox.column_name() to avoid magic variables
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+ n_classifications = dataset.samples[Classification.column_name()].list.len().sum()
68
+
69
+ class_counts = dataset.samples[Classification.column_name()].explode().struct.field("class_name").value_counts()
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+ class_counts = dataset.samples[Bbox.column_name()].explode().struct.field("class_name").value_counts()
71
+ rprint(dict(class_counts.iter_rows()))
72
+
73
+
60
74
  # Access the first sample in the training split - data is stored in a dictionary
61
75
  sample_dict = dataset_train[0]
62
76
 
@@ -78,25 +92,15 @@ image: np.ndarray = sample.read_image()
78
92
  # Visualize sample and annotations
79
93
  image_with_annotations = sample.draw_annotations()
80
94
 
81
-
95
+ # Save the image with annotations to a temporary directory
82
96
  path_tmp.mkdir(parents=True, exist_ok=True)
83
97
  Image.fromarray(image_with_annotations).save(path_tmp / "sample_with_annotations.png")
84
98
 
85
99
 
86
- # Do dataset transformations and statistics on the Polars DataFrame
87
- n_objects = dataset.samples["objects"].list.len().sum()
88
- n_objects = dataset.samples[Bbox.column_name()].list.len().sum() # Use Bbox.column_name() to avoid magic variables
89
- n_classifications = dataset.samples[Classification.column_name()].list.len().sum()
90
-
91
- class_counts = dataset.samples[Classification.column_name()].explode().struct.field("class_name").value_counts()
92
- class_counts = dataset.samples[Bbox.column_name()].explode().struct.field("class_name").value_counts()
93
- rprint(dict(class_counts.iter_rows()))
94
-
95
-
96
100
  ## Bring-your-own-data: Create a new dataset from samples
97
101
  fake_samples = []
98
102
  for i_fake_sample in range(5):
99
- bboxes = [Bbox(top_left_x=10, top_left_y=20, width=100, height=200, class_name="car")]
103
+ bboxes = [Bbox(top_left_x=0.1, top_left_y=0.20, width=0.1, height=0.2, class_name="car")]
100
104
  classifications = [Classification(class_name="vehicle", class_idx=0)]
101
105
  sample = Sample(
102
106
  file_name=f"path/to/image_{i_fake_sample:05}.jpg",
@@ -120,8 +124,14 @@ fake_dataset_info = DatasetInfo(
120
124
  )
121
125
  fake_dataset = HafniaDataset.from_samples_list(samples_list=fake_samples, info=fake_dataset_info)
122
126
 
127
+ # Coming soon! Upload your dataset to the Hafnia Platform
128
+ # fake_dataset.upload_to_hafnia()
129
+
130
+ # Coming soon! Create your own dataset details page in Hafnia
131
+ # fake_dataset.upload_dataset_details()
123
132
 
124
- ## A hafnia dataset can also be used for storing predictions per sample set 'ground_truth=False' and add 'confidence'.
133
+ ## Storing predictions: A hafnia dataset can also be used for storing predictions per sample
134
+ # set 'ground_truth=False' and add 'confidence'.
125
135
  bboxes_predictions = [
126
136
  Bbox(top_left_x=10, top_left_y=20, width=100, height=200, class_name="car", ground_truth=False, confidence=0.9)
127
137
  ]
@@ -1,6 +1,6 @@
1
1
  [project]
2
2
  name = "hafnia"
3
- version = "0.2.1"
3
+ version = "0.2.3"
4
4
  description = "Python SDK for communication with Hafnia platform."
5
5
  readme = "README.md"
6
6
  authors = [
@@ -20,19 +20,15 @@ def configure(cfg: Config) -> None:
20
20
 
21
21
  profile_name = click.prompt("Profile Name", type=str, default=consts.DEFAULT_PROFILE_NAME)
22
22
  profile_name = profile_name.strip()
23
- try:
24
- cfg.add_profile(profile_name, ConfigSchema(), set_active=True)
25
- except ValueError:
26
- raise click.ClickException(consts.ERROR_CREATE_PROFILE)
23
+
24
+ cfg.check_profile_name(profile_name)
27
25
 
28
26
  api_key = click.prompt("Hafnia API Key", type=str, hide_input=True)
29
- try:
30
- cfg.api_key = api_key.strip()
31
- except ValueError as e:
32
- click.echo(f"Error: {str(e)}", err=True)
33
- return
27
+
34
28
  platform_url = click.prompt("Hafnia Platform URL", type=str, default=consts.DEFAULT_API_URL)
35
- cfg.platform_url = platform_url.strip()
29
+
30
+ cfg_profile = ConfigSchema(api_key=api_key, platform_url=platform_url)
31
+ cfg.add_profile(profile_name, cfg_profile, set_active=True)
36
32
  cfg.save_config()
37
33
  profile_cmds.profile_show(cfg)
38
34
 
@@ -6,7 +6,7 @@ from typing import Dict, List, Optional
6
6
  from pydantic import BaseModel, field_validator
7
7
 
8
8
  import cli.consts as consts
9
- from hafnia.log import user_logger
9
+ from hafnia.log import sys_logger, user_logger
10
10
 
11
11
  PLATFORM_API_MAPPING = {
12
12
  "recipes": "/api/v1/recipes",
@@ -23,9 +23,17 @@ class ConfigSchema(BaseModel):
23
23
  api_key: Optional[str] = None
24
24
 
25
25
  @field_validator("api_key")
26
- def validate_api_key(cls, value: str) -> str:
27
- if value is not None and len(value) < 10:
26
+ def validate_api_key(cls, value: Optional[str]) -> Optional[str]:
27
+ if value is None:
28
+ return value
29
+
30
+ if len(value) < 10:
28
31
  raise ValueError("API key is too short.")
32
+
33
+ if not value.startswith("ApiKey "):
34
+ sys_logger.warning("API key is missing the 'ApiKey ' prefix. Prefix is being added automatically.")
35
+ value = f"ApiKey {value}"
36
+
29
37
  return value
30
38
 
31
39
 
@@ -51,6 +59,7 @@ class Config:
51
59
  if profile_name not in self.config_data.profiles:
52
60
  raise ValueError(f"Profile '{profile_name}' does not exist.")
53
61
  self.config_data.active_profile = profile_name
62
+ self.save_config()
54
63
 
55
64
  @property
56
65
  def config(self) -> ConfigSchema:
@@ -92,13 +101,18 @@ class Config:
92
101
 
93
102
  return Path.home() / ".hafnia" / "config.json"
94
103
 
95
- def add_profile(self, profile_name: str, profile: ConfigSchema, set_active: bool = False) -> None:
96
- profile_name = profile_name.strip()
104
+ def check_profile_name(self, profile_name: str) -> None:
105
+ if not profile_name or not isinstance(profile_name, str):
106
+ raise ValueError("Profile name must be a non-empty string.")
107
+
97
108
  if profile_name in self.config_data.profiles:
98
109
  user_logger.warning(
99
110
  f"Profile with name '{profile_name}' already exists, it will be overwritten by the new one."
100
111
  )
101
112
 
113
+ def add_profile(self, profile_name: str, profile: ConfigSchema, set_active: bool = False) -> None:
114
+ profile_name = profile_name.strip()
115
+ self.check_profile_name(profile_name)
102
116
  self.config_data.profiles[profile_name] = profile
103
117
  if set_active:
104
118
  self.config_data.active_profile = profile_name
@@ -56,6 +56,7 @@ def profile_create(cfg: Config, name: str, api_url: str, api_key: str, activate:
56
56
  cfg_profile = ConfigSchema(platform_url=api_url, api_key=api_key)
57
57
 
58
58
  cfg.add_profile(profile_name=name, profile=cfg_profile, set_active=activate)
59
+ profile_show(cfg)
59
60
 
60
61
 
61
62
  @profile.command("rm")
@@ -87,7 +88,7 @@ def profile_active(cfg: Config) -> None:
87
88
 
88
89
 
89
90
  def profile_show(cfg: Config) -> None:
90
- masked_key = f"{cfg.api_key[:4]}...{cfg.api_key[-4:]}" if len(cfg.api_key) > 8 else "****"
91
+ masked_key = f"{cfg.api_key[:11]}...{cfg.api_key[-4:]}" if len(cfg.api_key) > 20 else "****"
91
92
  console = Console()
92
93
 
93
94
  table = Table(title=f"{consts.PROFILE_TABLE_HEADER} {cfg.active_profile}", show_header=False)
@@ -1,6 +1,7 @@
1
1
  import io
2
2
  import math
3
3
  import random
4
+ import shutil
4
5
  from pathlib import Path
5
6
  from typing import Dict, List
6
7
 
@@ -21,7 +22,7 @@ def create_split_name_list_from_ratios(split_ratios: Dict[str, float], n_items:
21
22
 
22
23
 
23
24
  def hash_file_xxhash(path: Path, chunk_size: int = 262144) -> str:
24
- hasher = xxhash.xxh3_64()
25
+ hasher = xxhash.xxh3_128()
25
26
 
26
27
  with open(path, "rb") as f:
27
28
  for chunk in iter(lambda: f.read(chunk_size), b""): # 8192, 16384, 32768, 65536
@@ -30,7 +31,7 @@ def hash_file_xxhash(path: Path, chunk_size: int = 262144) -> str:
30
31
 
31
32
 
32
33
  def hash_from_bytes(data: bytes) -> str:
33
- hasher = xxhash.xxh3_64()
34
+ hasher = xxhash.xxh3_128()
34
35
  hasher.update(data)
35
36
  return hasher.hexdigest()
36
37
 
@@ -40,14 +41,46 @@ def save_image_with_hash_name(image: np.ndarray, path_folder: Path) -> Path:
40
41
  buffer = io.BytesIO()
41
42
  pil_image.save(buffer, format="PNG")
42
43
  hash_value = hash_from_bytes(buffer.getvalue())
43
- path_image = Path(path_folder) / f"{hash_value}.png"
44
+ path_image = Path(path_folder) / relative_path_from_hash(hash=hash_value, suffix=".png")
45
+ path_image.parent.mkdir(parents=True, exist_ok=True)
44
46
  pil_image.save(path_image)
45
47
  return path_image
46
48
 
47
49
 
48
- def filename_as_hash_from_path(path_image: Path) -> str:
49
- hash = hash_file_xxhash(path_image)
50
- return f"{hash}{path_image.suffix}"
50
+ def copy_and_rename_file_to_hash_value(path_source: Path, path_dataset_root: Path) -> Path:
51
+ """
52
+ Copies a file to a dataset root directory with a hash-based name and sub-directory structure.
53
+
54
+ E.g. for an "image.png" with hash "dfe8f3b1c2a4f5b6c7d8e9f0a1b2c3d4", the image will be copied to
55
+ 'path_dataset_root / "data" / "dfe" / "dfe8f3b1c2a4f5b6c7d8e9f0a1b2c3d4.png"'
56
+ Notice that the hash is used for both the filename and the subfolder name.
57
+
58
+ Placing image/video files into multiple sub-folders (instead of one large folder) is seemingly
59
+ unnecessary, but it is actually a requirement when the dataset is later downloaded from S3.
60
+
61
+ The reason is that AWS has a rate limit of 3500 ops/sec per prefix (sub-folder) in S3 - meaning we can "only"
62
+ download 3500 files per second from a single folder (prefix) in S3.
63
+
64
+ For even a single user, we found that this limit was being reached when files are stored in single folder (prefix)
65
+ in S3. To support multiple users and concurrent experiments, we are required to separate files into
66
+ multiple sub-folders (prefixes) in S3 to not hit the rate limit.
67
+ """
68
+
69
+ if not path_source.exists():
70
+ raise FileNotFoundError(f"Source file {path_source} does not exist.")
71
+
72
+ hash_value = hash_file_xxhash(path_source)
73
+ path_file = path_dataset_root / relative_path_from_hash(hash=hash_value, suffix=path_source.suffix)
74
+ path_file.parent.mkdir(parents=True, exist_ok=True)
75
+ if not path_file.exists():
76
+ shutil.copy2(path_source, path_file)
77
+
78
+ return path_file
79
+
80
+
81
+ def relative_path_from_hash(hash: str, suffix: str) -> Path:
82
+ path_file = Path("data") / hash[:3] / f"{hash}{suffix}"
83
+ return path_file
51
84
 
52
85
 
53
86
  def split_sizes_from_ratios(n_items: int, split_ratios: Dict[str, float]) -> Dict[str, int]:
@@ -216,6 +216,16 @@ class DatasetRecipe(Serializable):
216
216
  json_str = self.as_json_str(indent=indent)
217
217
  path_json.write_text(json_str, encoding="utf-8")
218
218
 
219
+ ### Helper methods ###
220
+ def get_dataset_names(self) -> List[str]:
221
+ """
222
+ Get all dataset names added with 'from_name'.
223
+ Function recursively gathers dataset names.
224
+ """
225
+ if self.creation is None:
226
+ return []
227
+ return self.creation.get_dataset_names()
228
+
219
229
  ### Validation and Serialization ###
220
230
  @field_validator("creation", mode="plain")
221
231
  @classmethod
@@ -282,7 +292,10 @@ class FromPath(RecipeCreation):
282
292
  return HafniaDataset.from_path
283
293
 
284
294
  def as_short_name(self) -> str:
285
- return f"'{self.path_folder}'".replace(os.sep, "|")
295
+ return f"'{self.path_folder}'".replace(os.sep, "-")
296
+
297
+ def get_dataset_names(self) -> List[str]:
298
+ return [] # Only counts 'from_name' datasets
286
299
 
287
300
 
288
301
  class FromName(RecipeCreation):
@@ -297,6 +310,9 @@ class FromName(RecipeCreation):
297
310
  def as_short_name(self) -> str:
298
311
  return self.name
299
312
 
313
+ def get_dataset_names(self) -> List[str]:
314
+ return [self.name]
315
+
300
316
 
301
317
  class FromMerge(RecipeCreation):
302
318
  recipe0: DatasetRecipe
@@ -310,6 +326,11 @@ class FromMerge(RecipeCreation):
310
326
  merger = FromMerger(recipes=[self.recipe0, self.recipe1])
311
327
  return merger.as_short_name()
312
328
 
329
+ def get_dataset_names(self) -> List[str]:
330
+ """Get the dataset names from the merged recipes."""
331
+ names = [*self.recipe0.creation.get_dataset_names(), *self.recipe1.creation.get_dataset_names()]
332
+ return names
333
+
313
334
 
314
335
  class FromMerger(RecipeCreation):
315
336
  recipes: List[DatasetRecipe]
@@ -325,3 +346,40 @@ class FromMerger(RecipeCreation):
325
346
 
326
347
  def as_short_name(self) -> str:
327
348
  return f"Merger({','.join(recipe.as_short_name() for recipe in self.recipes)})"
349
+
350
+ def get_dataset_names(self) -> List[str]:
351
+ """Get the dataset names from the merged recipes."""
352
+ names = []
353
+ for recipe in self.recipes:
354
+ names.extend(recipe.creation.get_dataset_names())
355
+ return names
356
+
357
+
358
+ def extract_dataset_names_from_json_dict(data: dict) -> list[str]:
359
+ """
360
+ Extract dataset names recursively from a JSON dictionary added with 'from_name'.
361
+
362
+ Even if the same functionality is achieved with `DatasetRecipe.get_dataset_names()`,
363
+ we want to keep this function in 'dipdatalib' to extract dataset names from json dictionaries
364
+ directly.
365
+ """
366
+ creation_field = data.get("creation")
367
+ if creation_field is None:
368
+ return []
369
+ if creation_field.get("__type__") == "FromName":
370
+ return [creation_field["name"]]
371
+ elif creation_field.get("__type__") == "FromMerge":
372
+ recipe_names = ["recipe0", "recipe1"]
373
+ dataset_name = []
374
+ for recipe_name in recipe_names:
375
+ recipe = creation_field.get(recipe_name)
376
+ if recipe is None:
377
+ continue
378
+ dataset_name.extend(extract_dataset_names_from_json_dict(recipe))
379
+ return dataset_name
380
+ elif creation_field.get("__type__") == "FromMerger":
381
+ dataset_name = []
382
+ for recipe in creation_field.get("recipes", []):
383
+ dataset_name.extend(extract_dataset_names_from_json_dict(recipe))
384
+ return dataset_name
385
+ return []
@@ -108,6 +108,10 @@ class RecipeCreation(Serializable):
108
108
  def get_function() -> Callable[..., "HafniaDataset"]:
109
109
  pass
110
110
 
111
+ @abstractmethod
112
+ def get_dataset_names(self) -> List[str]:
113
+ pass
114
+
111
115
  def build(self) -> "HafniaDataset":
112
116
  from hafnia.dataset.dataset_recipe.dataset_recipe import DatasetRecipe
113
117
 
@@ -1,6 +1,5 @@
1
1
  from __future__ import annotations
2
2
 
3
- import os
4
3
  import shutil
5
4
  from dataclasses import dataclass
6
5
  from pathlib import Path
@@ -182,9 +181,8 @@ class HafniaDataset:
182
181
  table = read_table_from_path(path_folder)
183
182
 
184
183
  # Convert from relative paths to absolute paths
185
- table = table.with_columns(
186
- pl.concat_str([pl.lit(str(path_folder.absolute()) + os.sep), pl.col("file_name")]).alias("file_name")
187
- )
184
+ dataset_root = path_folder.absolute().as_posix() + "/"
185
+ table = table.with_columns((dataset_root + pl.col("file_name")).alias("file_name"))
188
186
  if check_for_images:
189
187
  check_image_paths(table)
190
188
  return HafniaDataset(samples=table, info=dataset_info)
@@ -413,30 +411,18 @@ class HafniaDataset:
413
411
 
414
412
  return True
415
413
 
416
- def write(self, path_folder: Path, name_by_hash: bool = True, add_version: bool = False) -> None:
414
+ def write(self, path_folder: Path, add_version: bool = False) -> None:
417
415
  user_logger.info(f"Writing dataset to {path_folder}...")
418
416
  if not path_folder.exists():
419
417
  path_folder.mkdir(parents=True)
420
- path_folder_images = path_folder / "data"
421
- path_folder_images.mkdir(parents=True, exist_ok=True)
422
418
 
423
419
  new_relative_paths = []
424
420
  for org_path in tqdm(self.samples["file_name"].to_list(), desc="- Copy images"):
425
- org_path = Path(org_path)
426
- if not org_path.exists():
427
- raise FileNotFoundError(f"File {org_path} does not exist in the dataset.")
428
- if name_by_hash:
429
- filename = dataset_helpers.filename_as_hash_from_path(org_path)
430
- else:
431
- filename = Path(org_path).name
432
- new_path = path_folder_images / filename
433
- if not new_path.exists():
434
- shutil.copy2(org_path, new_path)
435
-
436
- if not new_path.exists():
437
- raise FileNotFoundError(f"File {new_path} does not exist in the dataset.")
421
+ new_path = dataset_helpers.copy_and_rename_file_to_hash_value(
422
+ path_source=Path(org_path),
423
+ path_dataset_root=path_folder,
424
+ )
438
425
  new_relative_paths.append(str(new_path.relative_to(path_folder)))
439
-
440
426
  table = self.samples.with_columns(pl.Series(new_relative_paths).alias("file_name"))
441
427
  table.write_ndjson(path_folder / FILENAME_ANNOTATIONS_JSONL) # Json for readability
442
428
  table.write_parquet(path_folder / FILENAME_ANNOTATIONS_PARQUET) # Parquet for speed
@@ -2,6 +2,7 @@ import os
2
2
  import shutil
3
3
  import subprocess
4
4
  import tempfile
5
+ import uuid
5
6
  from pathlib import Path
6
7
  from typing import Any, Dict, List, Optional
7
8
 
@@ -61,7 +62,12 @@ def download_or_get_dataset_path(
61
62
  dataset_id = get_dataset_id(dataset_name=dataset_name, endpoint=endpoint_dataset, api_key=api_key)
62
63
  if dataset_id is None:
63
64
  sys_logger.error(f"Dataset '{dataset_name}' not found on the Hafnia platform.")
64
- access_dataset_endpoint = f"{endpoint_dataset}/{dataset_id}/temporary-credentials"
65
+
66
+ if utils.is_hafnia_cloud_job():
67
+ credentials_endpoint_suffix = "temporary-credentials-hidden" # Access to hidden datasets
68
+ else:
69
+ credentials_endpoint_suffix = "temporary-credentials" # Access to sample dataset
70
+ access_dataset_endpoint = f"{endpoint_dataset}/{dataset_id}/{credentials_endpoint_suffix}"
65
71
 
66
72
  download_dataset_from_access_endpoint(
67
73
  endpoint=access_dataset_endpoint,
@@ -80,7 +86,7 @@ def download_dataset_from_access_endpoint(
80
86
  ) -> None:
81
87
  resource_credentials = get_resource_credentials(endpoint, api_key)
82
88
 
83
- local_dataset_paths = [str(path_dataset / filename) for filename in DATASET_FILENAMES_REQUIRED]
89
+ local_dataset_paths = [(path_dataset / filename).as_posix() for filename in DATASET_FILENAMES_REQUIRED]
84
90
  s3_uri = resource_credentials.s3_uri()
85
91
  s3_dataset_files = [f"{s3_uri}/{filename}" for filename in DATASET_FILENAMES_REQUIRED]
86
92
 
@@ -94,7 +100,6 @@ def download_dataset_from_access_endpoint(
94
100
 
95
101
  if not download_files:
96
102
  return
97
-
98
103
  dataset = HafniaDataset.from_path(path_dataset, check_for_images=False)
99
104
  fast_copy_files_s3(
100
105
  src_paths=dataset.samples[ColumnName.REMOTE_PATH].to_list(),
@@ -124,8 +129,10 @@ def execute_s5cmd_commands(
124
129
  description: str = "Executing s5cmd commands",
125
130
  ) -> List[str]:
126
131
  append_envs = append_envs or {}
127
- with tempfile.NamedTemporaryFile(suffix=".txt") as tmp_file:
128
- tmp_file_path = Path(tmp_file.name)
132
+ # In Windows default "Temp" directory can not be deleted that is why we need to create a
133
+ # temporary directory.
134
+ with tempfile.TemporaryDirectory() as temp_dir:
135
+ tmp_file_path = Path(temp_dir, f"{uuid.uuid4().hex}.txt")
129
136
  tmp_file_path.write_text("\n".join(commands))
130
137
  run_cmds = [
131
138
  "s5cmd",
@@ -6,8 +6,8 @@ import numpy as np
6
6
  import pytest
7
7
  from PIL import Image
8
8
 
9
- from hafnia.helper_testing import get_path_expected_images
10
9
  from hafnia.visualizations import image_visualizations
10
+ from tests.helper_testing import get_path_expected_images
11
11
 
12
12
 
13
13
  @pytest.fixture
@@ -1,4 +1,5 @@
1
1
  import inspect
2
+ import json
2
3
  import tempfile
3
4
  from dataclasses import dataclass
4
5
  from pathlib import Path
@@ -9,13 +10,14 @@ import pytest
9
10
  from hafnia.dataset.dataset_recipe.dataset_recipe import (
10
11
  DatasetRecipe,
11
12
  FromMerger,
13
+ extract_dataset_names_from_json_dict,
12
14
  get_dataset_path_from_recipe,
13
15
  )
14
16
  from hafnia.dataset.dataset_recipe.recipe_transforms import SelectSamples, Shuffle
15
17
  from hafnia.dataset.dataset_recipe.recipe_types import RecipeCreation, RecipeTransform, Serializable
16
18
  from hafnia.dataset.hafnia_dataset import HafniaDataset
17
- from hafnia.helper_testing import annotation_as_string, is_hafnia_configured
18
19
  from hafnia.utils import pascal_to_snake_case
20
+ from tests.helper_testing import annotation_as_string, is_hafnia_configured
19
21
 
20
22
 
21
23
  def get_data_recipe() -> DatasetRecipe:
@@ -171,7 +173,7 @@ class IntegrationTestUseCase:
171
173
  ),
172
174
  IntegrationTestUseCase(
173
175
  recipe=DatasetRecipe.from_path(path_folder=Path(".data/datasets/mnist"), check_for_images=False),
174
- short_name="'.data|datasets|mnist'",
176
+ short_name="'.data-datasets-mnist'",
175
177
  ),
176
178
  IntegrationTestUseCase(
177
179
  recipe=DatasetRecipe.from_merger(
@@ -180,14 +182,14 @@ class IntegrationTestUseCase:
180
182
  DatasetRecipe.from_path(path_folder=Path(".data/datasets/mnist"), check_for_images=False),
181
183
  ]
182
184
  ),
183
- short_name="Merger(mnist,'.data|datasets|mnist')",
185
+ short_name="Merger(mnist,'.data-datasets-mnist')",
184
186
  ),
185
187
  IntegrationTestUseCase(
186
188
  recipe=DatasetRecipe.from_merge(
187
189
  recipe0=DatasetRecipe.from_path(path_folder=Path(".data/datasets/mnist"), check_for_images=False),
188
190
  recipe1=DatasetRecipe.from_name(name="mnist", force_redownload=False),
189
191
  ),
190
- short_name="Merger('.data|datasets|mnist',mnist)",
192
+ short_name="Merger('.data-datasets-mnist',mnist)",
191
193
  ),
192
194
  IntegrationTestUseCase(
193
195
  recipe=DatasetRecipe.from_name(name="mnist", force_redownload=False)
@@ -258,3 +260,44 @@ def test_cases_integration_tests(recipe_use_case: IntegrationTestUseCase):
258
260
 
259
261
  assert isinstance(dataset, HafniaDataset), "Dataset is not an instance of HafniaDataset"
260
262
  # assert isinstance(dataset, HafniaDataset), "Dataset is not an instance of HafniaDataset"
263
+
264
+
265
+ def test_get_dataset_names():
266
+ expected_dataset_names = {"dataset0", "dataset1", "dataset2", "dataset3", "dataset4", "dataset5", "dataset6"}
267
+ nested_recipe = DatasetRecipe.from_merger(
268
+ recipes=[
269
+ DatasetRecipe.from_merger(
270
+ recipes=[
271
+ DatasetRecipe.from_name(name="dataset0"),
272
+ DatasetRecipe.from_name(name="dataset1"),
273
+ DatasetRecipe.from_merge(
274
+ recipe0=DatasetRecipe.from_name(name="dataset2"),
275
+ recipe1=DatasetRecipe.from_name(name="dataset3"),
276
+ ),
277
+ ]
278
+ ),
279
+ DatasetRecipe.from_path(path_folder=Path(".data/datasets/mnist"))
280
+ .select_samples(n_samples=30)
281
+ .splits_by_ratios(split_ratios={"train": 0.8, "val": 0.1, "test": 0.1}),
282
+ DatasetRecipe.from_name(name="dataset4").select_samples(n_samples=20).shuffle(),
283
+ DatasetRecipe.from_merger(
284
+ recipes=[
285
+ DatasetRecipe.from_name(name="dataset5"),
286
+ DatasetRecipe.from_name(name="dataset6"),
287
+ ]
288
+ ),
289
+ ]
290
+ )
291
+
292
+ assert set(nested_recipe.get_dataset_names()) == expected_dataset_names, "Dataset names do not match expected names"
293
+
294
+ json_str = nested_recipe.as_json_str()
295
+ nested_recipe.as_json_file(path_json=Path("nested_recipe.json"))
296
+ data_dict = json.loads(json_str)
297
+
298
+ dataset_names = extract_dataset_names_from_json_dict(data_dict)
299
+ assert set(dataset_names) == expected_dataset_names, (
300
+ f"If this function fails, you should be concerned !! The '{extract_dataset_names_from_json_dict.__name__}' "
301
+ "function is copy/pasted to 'dipdatalib' to extract dataset names from json dictionaries directly. "
302
+ "If this test fails, please fix the function and copy/paste the function to dipdatalib as well."
303
+ )
@@ -15,7 +15,7 @@ from hafnia.dataset.dataset_recipe.recipe_transforms import (
15
15
  )
16
16
  from hafnia.dataset.dataset_recipe.recipe_types import RecipeTransform
17
17
  from hafnia.dataset.hafnia_dataset import HafniaDataset
18
- from hafnia.helper_testing import get_micro_hafnia_dataset
18
+ from tests.helper_testing import get_micro_hafnia_dataset
19
19
 
20
20
 
21
21
  @dataclass