gtfparse 2.6.0__tar.gz → 2.6.2__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (23) hide show
  1. {gtfparse-2.6.0 → gtfparse-2.6.2}/PKG-INFO +1 -1
  2. {gtfparse-2.6.0 → gtfparse-2.6.2}/gtfparse/__init__.py +4 -5
  3. {gtfparse-2.6.0 → gtfparse-2.6.2}/gtfparse.egg-info/PKG-INFO +1 -1
  4. {gtfparse-2.6.0 → gtfparse-2.6.2}/pyproject.toml +8 -0
  5. {gtfparse-2.6.0 → gtfparse-2.6.2}/LICENSE +0 -0
  6. {gtfparse-2.6.0 → gtfparse-2.6.2}/README.md +0 -0
  7. {gtfparse-2.6.0 → gtfparse-2.6.2}/gtfparse/attribute_parsing.py +0 -0
  8. {gtfparse-2.6.0 → gtfparse-2.6.2}/gtfparse/create_missing_features.py +0 -0
  9. {gtfparse-2.6.0 → gtfparse-2.6.2}/gtfparse/parsing_error.py +0 -0
  10. {gtfparse-2.6.0 → gtfparse-2.6.2}/gtfparse/read_gtf.py +0 -0
  11. {gtfparse-2.6.0 → gtfparse-2.6.2}/gtfparse.egg-info/SOURCES.txt +0 -0
  12. {gtfparse-2.6.0 → gtfparse-2.6.2}/gtfparse.egg-info/dependency_links.txt +0 -0
  13. {gtfparse-2.6.0 → gtfparse-2.6.2}/gtfparse.egg-info/requires.txt +0 -0
  14. {gtfparse-2.6.0 → gtfparse-2.6.2}/gtfparse.egg-info/top_level.txt +0 -0
  15. {gtfparse-2.6.0 → gtfparse-2.6.2}/requirements.txt +0 -0
  16. {gtfparse-2.6.0 → gtfparse-2.6.2}/setup.cfg +0 -0
  17. {gtfparse-2.6.0 → gtfparse-2.6.2}/tests/test_create_missing_features.py +0 -0
  18. {gtfparse-2.6.0 → gtfparse-2.6.2}/tests/test_ensembl_gtf.py +0 -0
  19. {gtfparse-2.6.0 → gtfparse-2.6.2}/tests/test_expand_attributes.py +0 -0
  20. {gtfparse-2.6.0 → gtfparse-2.6.2}/tests/test_multiple_values_for_tag_attribute.py +0 -0
  21. {gtfparse-2.6.0 → gtfparse-2.6.2}/tests/test_parse_gtf_lines.py +0 -0
  22. {gtfparse-2.6.0 → gtfparse-2.6.2}/tests/test_read_stringtie_gtf.py +0 -0
  23. {gtfparse-2.6.0 → gtfparse-2.6.2}/tests/test_refseq_gtf.py +0 -0
{gtfparse-2.6.0 → gtfparse-2.6.2}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: gtfparse
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- Version: 2.6.0
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+ Version: 2.6.2
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  Summary: Parsing library for extracting data frames of genomic features from GTF files
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  Author-email: Alex Rubinsteyn <alex.rubinsteyn@unc.edu>
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  Project-URL: Homepage, https://github.com/openvax/gtfparse
{gtfparse-2.6.0 → gtfparse-2.6.2}/gtfparse/__init__.py RENAMED
@@ -14,20 +14,19 @@ from .attribute_parsing import expand_attribute_strings
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  from .create_missing_features import create_missing_features
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  from .parsing_error import ParsingError
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  from .read_gtf import (
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- read_gtf,
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+ read_gtf,
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  parse_gtf,
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- parse_gtf_pandas,
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- parse_gtf_and_expand_attributes,
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+ parse_gtf_pandas,
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+ parse_gtf_and_expand_attributes,
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  REQUIRED_COLUMNS,
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  )
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- __version__ = "2.6.0"
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+ __version__ = "2.6.2"
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  __all__ = [
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  "__version__",
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  "expand_attribute_strings",
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  "create_missing_features",
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-
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  "parse_gtf_and_expand_attributes",
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  "REQUIRED_COLUMNS",
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  "ParsingError",
{gtfparse-2.6.0 → gtfparse-2.6.2}/gtfparse.egg-info/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: gtfparse
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- Version: 2.6.0
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+ Version: 2.6.2
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  Summary: Parsing library for extracting data frames of genomic features from GTF files
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  Author-email: Alex Rubinsteyn <alex.rubinsteyn@unc.edu>
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  Project-URL: Homepage, https://github.com/openvax/gtfparse
{gtfparse-2.6.0 → gtfparse-2.6.2}/pyproject.toml RENAMED
@@ -25,3 +25,11 @@ packages = ["gtfparse"]
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  [project.urls]
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  "Homepage" = "https://github.com/openvax/gtfparse"
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  "Bug Tracker" = "https://github.com/openvax/gtfparse"
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+
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+ [tool.ruff.lint]
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+ select = ["E", "F"]
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+ ignore = ["F821", "E501", "F841", "E731", "E741", "E722", "E721"]
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+
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+ [tool.ruff.lint.per-file-ignores]
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+ "__init__.py" = ["F401"]
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+ "test*/*" = ["F401"]
{gtfparse-2.6.0 → gtfparse-2.6.2}/LICENSE RENAMED
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{gtfparse-2.6.0 → gtfparse-2.6.2}/README.md RENAMED
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{gtfparse-2.6.0 → gtfparse-2.6.2}/gtfparse/read_gtf.py RENAMED
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{gtfparse-2.6.0 → gtfparse-2.6.2}/requirements.txt RENAMED
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{gtfparse-2.6.0 → gtfparse-2.6.2}/setup.cfg RENAMED
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