grz-cli 0.1.3__tar.gz → 0.2.0__tar.gz

{grz_cli-0.1.3/src/grz_cli.egg-info → grz_cli-0.2.0}/PKG-INFO

@@ -1,6 +1,6 @@
-Metadata-Version: 2.1
+Metadata-Version: 2.2
 Name: grz-cli
-Version: 0.1.3
+Version: 0.2.0
 Summary: Tool for validation, encryption and upload of MV submissions to GDCs.
 Author-email: Koray Kirli <koraykirli@gmail.com>, Mathias Lesche <mathias.lesche@tu-dresden.de>, "Florian R. Hölzlwimmer" <git.ich@frhoelzlwimmer.de>, Till Hartmann <till.hartmann@bih-charite.de>, Thomas Sell <thomas.sell@bih-charite.de>
 License: MIT
@@ -11,7 +11,6 @@ Classifier: License :: OSI Approved :: MIT License
 Classifier: Operating System :: OS Independent
 Requires-Python: >=3.12
 Description-Content-Type: text/markdown
-License-File: LICENSE
 Requires-Dist: boto3<2,>=1.35.39
 Requires-Dist: click<9,>=8.1.7
 Requires-Dist: crypt4gh<2,>=1.7
@@ -26,7 +25,7 @@ Requires-Dist: pytest-cov<6,>=5.0.0; extra == "test"
 Requires-Dist: pytest-mock<4,>=3.14.0; extra == "test"
 Requires-Dist: moto[s3]<6,>=5.0.16; extra == "test"
 Requires-Dist: pytest-sugar<2,>=1.0.0; extra == "test"
-Requires-Dist: ruff<1,>=0.8.1; extra == "test"
+Requires-Dist: ruff<1,>=0.9.6; extra == "test"
 Requires-Dist: numpy<3,>=2.1.2; extra == "test"
 
 # GRZ CLI

{grz_cli-0.1.3 → grz_cli-0.2.0}/pyproject.toml

@@ -4,7 +4,7 @@ build-backend = "setuptools.build_meta"
 
 [project]
 name = "grz-cli"
-version = "0.1.3"
+version = "0.2.0"
 description = "Tool for validation, encryption and upload of MV submissions to GDCs."
 readme = "README.md"
 license = { text = "MIT" }
@@ -46,7 +46,7 @@ test = [
     "pytest-mock >=3.14.0,<4",
     "moto[s3] >=5.0.16,<6",
     "pytest-sugar >=1.0.0,<2",
-    "ruff >=0.8.1,<1",
+    "ruff >=0.9.6,<1",
     "numpy >=2.1.2,<3"
 ]
 
@@ -154,21 +154,25 @@ allowlist_externals = ["pytest", "ruff"]
 isolated_build = true
 
 [tool.tox.env_run_base]
+runner = "uv-venv-lock-runner"
 description = "run unit tests"
 dependency_groups = ["test"]
 commands = [["pytest", { replace = "posargs", default = ["tests"], extend = true }]]
 
 [tool.tox.env."format-check"]
+runner = "uv-venv-lock-runner"
 skip_install = true
 dependency_groups = ["lint"]
 commands = [["ruff", "format", "--check"]]
 
 [tool.tox.env."lints"]
+runner = "uv-venv-lock-runner"
 skip_install = true
 dependency_groups = ["lint"]
 commands = [["ruff", "check"]]
 
 [tool.tox.env."mypy"]
+runner = "uv-venv-lock-runner"
 skip_install = false
 dependency_groups = ["lint"]
 commands = [["mypy"]]
@@ -177,8 +181,9 @@ commands = [["mypy"]]
 dev-dependencies = [
     "datamodel-code-generator>=0.26.2",
     "mypy>=1.13.0",
-    "ruff>=0.8.1",
+    "ruff>=0.9.6",
     "tox>=4.23.2",
+    "tox-uv>=1.20.1",
     "types-pyyaml>=6.0.12.20240917",
     "types-tqdm>=4.66.0.20240417",
 ]
@@ -192,3 +197,6 @@ packages = "src"
 addopts = [
     "--import-mode=importlib",
 ]
+
+[tool.setuptools]
+license-files = []

{grz_cli-0.1.3 → grz_cli-0.2.0}/src/grz_cli/cli.py

@@ -2,6 +2,7 @@
 CLI module for handling command-line interface operations.
 """
 
+import importlib
 import logging
 import logging.config
 import sys
@@ -107,7 +108,7 @@ class OrderedGroup(click.Group):
     cls=OrderedGroup,
     help="Validate, encrypt, decrypt and upload submissions to a GRZ/GDC.",
 )
-@click.version_option(version="0.1", prog_name="grz-cli")
+@click.version_option(version=importlib.metadata.version("grz-cli"), prog_name="grz-cli")
 @click.option("--log-file", metavar="FILE", type=str, help="Path to log file")
 @click.option(
     "--log-level",
@@ -229,7 +230,7 @@ def decrypt(
         log.error("GRZ private key path is required for decryption.")
         sys.exit(1)
 
-    log.info("Starting encryption...")
+    log.info("Starting decryption...")
 
     submission_dir = Path(submission_dir)
 

{grz_cli-0.1.3 → grz_cli-0.2.0}/src/grz_cli/download.py

@@ -146,7 +146,7 @@ class S3BotoDownloadWorker:
             if filesize / MULTIPART_CHUNKSIZE > MULTIPART_MAX_CHUNKS
             else MULTIPART_CHUNKSIZE
         )
-        self.__log.debug(f"Using a chunksize of: {chunksize / 1024**2}MiB, results in {filesize/chunksize} chunks")
+        self.__log.debug(f"Using a chunksize of: {chunksize / 1024**2}MiB, results in {filesize / chunksize} chunks")
 
         config = TransferConfig(
             multipart_threshold=MULTIPART_THRESHOLD,