grdwindinversion 0.2.5__tar.gz → 0.2.6__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (58) hide show
  1. grdwindinversion-0.2.6/.github/workflows/build.yml +40 -0
  2. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/.github/workflows/ci.yml +27 -23
  3. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/PKG-INFO +4 -1
  4. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/grdwindinversion/inversion.py +1 -1
  5. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/grdwindinversion.egg-info/PKG-INFO +4 -1
  6. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/grdwindinversion.egg-info/SOURCES.txt +1 -0
  7. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/grdwindinversion.egg-info/requires.txt +3 -0
  8. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/pyproject.toml +3 -0
  9. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/.editorconfig +0 -0
  10. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/.github/dependabot.yml +0 -0
  11. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/.github/workflows/publish.yml +0 -0
  12. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/.gitignore +0 -0
  13. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/.pre-commit-config.yaml +0 -0
  14. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/AUTHORS.rst +0 -0
  15. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/CONTRIBUTING.rst +0 -0
  16. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/HISTORY.rst +0 -0
  17. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/LICENSE +0 -0
  18. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/MANIFEST.in +0 -0
  19. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/Makefile +0 -0
  20. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/README.md +0 -0
  21. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/ci/requirements/docs.yaml +0 -0
  22. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/ci/requirements/environment.yaml +0 -0
  23. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/docs/Makefile +0 -0
  24. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/docs/_static/css/grdwindinversion.css +0 -0
  25. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/docs/algorithm.rst +0 -0
  26. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/docs/authors.rst +0 -0
  27. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/docs/conf.py +0 -0
  28. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/docs/contributing.rst +0 -0
  29. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/docs/examples/wind-inversion-from-grd.ipynb +0 -0
  30. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/docs/history.rst +0 -0
  31. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/docs/index.rst +0 -0
  32. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/docs/installation.rst +0 -0
  33. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/docs/make.bat +0 -0
  34. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/docs/modules.rst +0 -0
  35. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/docs/readme.rst +0 -0
  36. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/docs/usage.rst +0 -0
  37. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/grdwindinversion/.github/ISSUE_TEMPLATE.md +0 -0
  38. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/grdwindinversion/.gitignore +0 -0
  39. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/grdwindinversion/__init__.py +0 -0
  40. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/grdwindinversion/config_prod.yaml +0 -0
  41. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/grdwindinversion/config_prod_recal.yaml +0 -0
  42. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/grdwindinversion/data_config.yaml +0 -0
  43. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/grdwindinversion/load_config.py +0 -0
  44. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/grdwindinversion/main.py +0 -0
  45. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/grdwindinversion/streaks.py +0 -0
  46. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/grdwindinversion/utils.py +0 -0
  47. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/grdwindinversion/utils_memory.py +0 -0
  48. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/grdwindinversion.egg-info/dependency_links.txt +0 -0
  49. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/grdwindinversion.egg-info/entry_points.txt +0 -0
  50. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/grdwindinversion.egg-info/top_level.txt +0 -0
  51. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/recipe/meta.yaml +0 -0
  52. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/requirements_dev.txt +0 -0
  53. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/requirements_doc.txt +0 -0
  54. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/setup.cfg +0 -0
  55. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/tests/__init__.py +0 -0
  56. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/tests/config_test.yaml +0 -0
  57. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/tests/test_grdwindinversion_ci.py +0 -0
  58. {grdwindinversion-0.2.5 → grdwindinversion-0.2.6}/tox.ini +0 -0
@@ -0,0 +1,40 @@
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+ name: Build and Upload Conda Package
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+
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+ on:
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+ release:
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+ types:
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+ - created
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+
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+ jobs:
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+ build-and-upload-conda-package:
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+ if: true
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+ runs-on: ubuntu-latest
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+ #${{ github.event.workflow_run.conclusion == 'success' }}
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+ steps:
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+ - name: Checkout repository
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+ uses: actions/checkout@v3
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+ with:
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+ fetch-depth: 0
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+
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+ - name: Set up Miniconda
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+ uses: conda-incubator/setup-miniconda@v2
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+ with:
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+ auto-update-conda: true
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+ python-version: 3.9
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+
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+ - name: Install conda-build
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+ run: |
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+ conda init
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+ source ~/.bashrc
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+ conda activate base
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+ conda install -y -c conda-forge conda-build anaconda-client
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+
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+ - name: Build and Upload Conda package
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+ env:
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+ ANACONDA_TOKEN: ${{ secrets.ANACONDA_TOKEN }}
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+ run: |
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+ cd recipe
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+ conda init
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+ source ~/.bashrc
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+ conda activate base
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+ conda-build . --token $ANACONDA_TOKEN --user tcevaer -c tcevaer -c conda-forge
@@ -15,65 +15,69 @@ jobs:
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  steps:
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  # Checkout the code
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- - name: Checkout code
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- uses: actions/checkout@v4
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+ - name: Checkout code
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+ uses: actions/checkout@v4
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  - uses: mamba-org/setup-micromamba@v1
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  with:
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  micromamba-version: "1.5.9-1" # any version from https://github.com/mamba-org/micromamba-releases
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- channels: tcevaer, conda-forge, defaults
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+ channels: tcevaer, conda-forge
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  init-shell: bash
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  post-cleanup: "all"
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+ - name: Configure Conda channel priority to disabled
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+ run: |
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+ conda config --set channel_priority disabled
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+
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  - name: Create environment and install tools
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- run: micromamba create -n grdwind_env pytest conda-build boa python=3.10 -y -c tcevaer -c conda-forge
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+ run: micromamba create -n grdwind_env pytest conda-build boa python=3.10 -y
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  - name: Build package
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  run: |
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  cd recipe
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  eval "$(micromamba shell hook --shell bash)"
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  micromamba activate grdwind_env
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- conda mambabuild . -c tcevaer -c conda-forge
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+ conda mambabuild .
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  # Install the built package into the environment
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  - name: Install the built package
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  run: |
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  eval "$(micromamba shell hook --shell bash)"
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  micromamba activate grdwind_env
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- conda install --use-local grdwindinversion -y -c tcevaer -c conda-forge
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+ conda install --use-local grdwindinversion -y
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45
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  # Cache the test data if previously downloaded (up to 10 GB limit for the cache)
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  # WARNING : modify the key if the data is modified !!
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- - name: Cache test data
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- uses: actions/cache@v4
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- id: cache
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- with:
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- path: ./test_data
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- key: test-data-v3
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- restore-keys: test-data-v3
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+ - name: Cache test data
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+ uses: actions/cache@v4
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+ id: cache
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+ with:
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+ path: ./test_data
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+ key: test-data-v3
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+ restore-keys: test-data-v3
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  # Download test data if not already cached
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- - name: Download test data
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- if: steps.cache.outputs.cache-hit != 'true' # Only download if cache miss
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- run: |
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+ - name: Download test data
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+ if: steps.cache.outputs.cache-hit != 'true' # Only download if cache miss
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+ run: |
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  mkdir -p ./test_data/
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  wget https://cloud.ifremer.fr/index.php/s/ExLQ2TnYAqozPWE/download -O /tmp/ecmwf.zip
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  unzip /tmp/ecmwf.zip -d ./test_data/
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  wget https://cloud.ifremer.fr/index.php/s/kRgdOOPsjoZieZR/download -O /tmp/l1.zip
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  unzip /tmp/l1.zip -d ./test_data/
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- timeout-minutes: 200 # Adjust depending on the size of your data
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+ timeout-minutes: 200 # Adjust depending on the size of your data
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  # Set up xsar configuration
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- - name: Setup xsar configuration
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- run: |
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+ - name: Setup xsar configuration
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+ run: |
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  mkdir -p ~/.xsar
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  echo "data_dir: /tmp" > ~/.xsar/config.yaml
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  echo "auxiliary_dir: ./test_data/auxiliary" >> ~/.xsar/config.yaml
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  echo "path_dataframe_aux: ./test_data/auxiliary/active_aux.csv" >> ~/.xsar/config.yaml
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  # Set up grdwindinversion configuration
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- - name: Setup grdwindinversion configuration
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- run: |
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+ - name: Setup grdwindinversion configuration
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+ run: |
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  mkdir -p ~/.grdwindinversion
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  echo "'ecmwf_0100_1h': ./test_data/ECMWF/forecast/hourly/0100deg/netcdf_light/%Y/%j/ECMWF_FORECAST_0100_%Y%m%d%H%M_10U_10V.nc" > ~/.grdwindinversion/data_config.yaml
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  echo "'ecmwf_0125_1h': ./test_data/ECMWF/0.125deg/1h/forecasts/%Y/%j/ecmwf_%Y%m%d%H%M.nc" >> ~/.grdwindinversion/data_config.yaml
@@ -82,8 +86,8 @@ jobs:
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  #echo "'lut_ms1ahw_path': './test_data/GMFS/v1.6/GMF_cmodms1ahw'" >> ~/.grdwindinversion/data_config.yaml
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  # Run the tests
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- - name: Run tests
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- run: |
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+ - name: Run tests
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+ run: |
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  eval "$(micromamba shell hook --shell bash)"
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  micromamba activate grdwind_env
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  pytest
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: grdwindinversion
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- Version: 0.2.5
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+ Version: 0.2.6
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  Summary: Package to perform Wind inversion from GRD Level-1 SAR images
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  License: MIT
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  Classifier: Development Status :: 2 - Pre-Alpha
@@ -27,6 +27,9 @@ Requires-Dist: numpy
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  Requires-Dist: scipy
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  Requires-Dist: fsspec
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  Requires-Dist: aiohttp
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+ Requires-Dist: xarray-safe-s1
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+ Requires-Dist: xradarsat2
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+ Requires-Dist: xarray-safe-rcm
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  # grdwindinversion
@@ -101,7 +101,7 @@ def getOutputName2(input_file, outdir, sensor, meta, subdir=True):
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  "${MISSIONID}_OK${DATA1}_PK${DATA2}_${DATA3}_${BEAM}_${DATE}_${TIME}_${POLARIZATION1}_${POLARIZATION2}_${PRODUCT}")
102
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  match = regex.match(basename_match)
103
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  MISSIONID, DATA1, DATA2, DATA3, BEAM_MODE, DATE, TIME, POLARIZATION1, POLARIZATION2, LAST = match.groups()
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- new_format = f"{MISSIONID.lower()}-{BEAM.lower()}-owi-xx-{meta_start_date.lower()}-{meta_stop_date.lower()}-_____-_____.nc"
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+ new_format = f"{MISSIONID.lower()}-{BEAM_MODE.lower()}-owi-xx-{meta_start_date.lower()}-{meta_stop_date.lower()}-_____-_____.nc"
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  else:
106
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  raise ValueError(
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  "sensor must be S1A|S1B|RS2|RCM, got sensor %s" % sensor)
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: grdwindinversion
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- Version: 0.2.5
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+ Version: 0.2.6
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  Summary: Package to perform Wind inversion from GRD Level-1 SAR images
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  License: MIT
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  Classifier: Development Status :: 2 - Pre-Alpha
@@ -27,6 +27,9 @@ Requires-Dist: numpy
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  Requires-Dist: scipy
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  Requires-Dist: fsspec
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  Requires-Dist: aiohttp
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+ Requires-Dist: xarray-safe-s1
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+ Requires-Dist: xradarsat2
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+ Requires-Dist: xarray-safe-rcm
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31
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  # grdwindinversion
@@ -13,6 +13,7 @@ requirements_dev.txt
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  requirements_doc.txt
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  tox.ini
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  .github/dependabot.yml
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+ .github/workflows/build.yml
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  .github/workflows/ci.yml
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  .github/workflows/publish.yml
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  ci/requirements/docs.yaml
@@ -7,3 +7,6 @@ numpy
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  scipy
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  fsspec
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  aiohttp
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+ xarray-safe-s1
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+ xradarsat2
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+ xarray-safe-rcm
@@ -14,6 +14,9 @@ dependencies = [
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  "scipy",
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  "fsspec",
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  "aiohttp",
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+ "xarray-safe-s1",
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+ "xradarsat2",
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+ "xarray-safe-rcm"
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  ]
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  dynamic = ["version"]