graphdatascience 1.22__tar.gz → 2.0a1__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {graphdatascience-1.22/src/graphdatascience.egg-info → graphdatascience-2.0a1}/PKG-INFO +5 -5
- {graphdatascience-1.22 → graphdatascience-2.0a1}/pyproject.toml +24 -7
- graphdatascience-2.0a1/src/graphdatascience/__init__.py +11 -0
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/arrow_client/arrow_info.py +4 -6
- graphdatascience-2.0a1/src/graphdatascience/arrow_client/arrow_table_utils.py +38 -0
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/arrow_client/authenticated_flight_client.py +38 -65
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/arrow_client/v1/gds_arrow_client.py +5 -7
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/arrow_client/v2/gds_arrow_client.py +3 -2
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/arrow_client/v2/job_client.py +1 -1
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/datasets/graph_constructor_func.py +2 -2
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/datasets/nx_loader.py +3 -3
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/datasets/ogb_loader.py +5 -5
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/datasets/simple_file_loader.py +0 -11
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/error/cypher_warning_handler.py +6 -3
- graphdatascience-2.0a1/src/graphdatascience/error/standalone_session_error.py +3 -0
- graphdatascience-2.0a1/src/graphdatascience/graph/__init__.py +3 -0
- {graphdatascience-1.22/src/graphdatascience/graph/v2 → graphdatascience-2.0a1/src/graphdatascience/graph}/graph_api.py +3 -3
- {graphdatascience-1.22/src/graphdatascience/graph/v2 → graphdatascience-2.0a1/src/graphdatascience/graph}/graph_backend_cypher.py +4 -3
- graphdatascience-1.22/src/graphdatascience/query_runner/arrow_graph_constructor.py → graphdatascience-2.0a1/src/graphdatascience/graph_construction/arrow_v1_graph_constructor.py +16 -24
- graphdatascience-2.0a1/src/graphdatascience/graph_construction/arrow_v2_graph_constructor.py +102 -0
- {graphdatascience-1.22/src/graphdatascience/query_runner → graphdatascience-2.0a1/src/graphdatascience/graph_construction}/cypher_graph_constructor.py +28 -143
- graphdatascience-1.22/src/graphdatascience/plugin_v2_endpoints.py → graphdatascience-2.0a1/src/graphdatascience/graph_data_science.py +380 -65
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/ignored_server_endpoints.py +0 -6
- {graphdatascience-1.22/src/graphdatascience/model/v2 → graphdatascience-2.0a1/src/graphdatascience/model}/model.py +2 -3
- {graphdatascience-1.22/src/graphdatascience/model/v2 → graphdatascience-2.0a1/src/graphdatascience/model}/model_api.py +1 -1
- {graphdatascience-1.22/src/graphdatascience/model/v2 → graphdatascience-2.0a1/src/graphdatascience/model}/model_details.py +1 -1
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/catalog/__init__.py +3 -1
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/catalog/catalog_endpoints.py +18 -12
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/catalog/dataset_endpoints.py +9 -9
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/catalog/graph_sampling_endpoints.py +6 -6
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/catalog/node_label_endpoints.py +3 -3
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/catalog/node_properties_endpoints.py +4 -4
- graphdatascience-2.0a1/src/graphdatascience/procedure_surface/api/catalog/relationships_data_frame.py +47 -0
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/catalog/relationships_endpoints.py +12 -11
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/catalog/scale_properties_endpoints.py +6 -6
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/centrality/articlerank_endpoints.py +6 -6
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/centrality/articulationpoints_endpoints.py +6 -6
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/centrality/betweenness_endpoints.py +6 -6
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/centrality/bridges_endpoints.py +3 -3
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/centrality/celf_endpoints.py +6 -6
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/centrality/closeness_endpoints.py +6 -6
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/centrality/closeness_harmonic_endpoints.py +6 -6
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/centrality/degree_endpoints.py +6 -6
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/centrality/eigenvector_endpoints.py +6 -6
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/centrality/pagerank_endpoints.py +6 -6
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/collapse_path_endpoints.py +2 -2
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/community/clique_counting_endpoints.py +6 -6
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/community/conductance_endpoints.py +2 -2
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/community/hdbscan_endpoints.py +6 -6
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/community/k1coloring_endpoints.py +6 -6
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/community/kcore_endpoints.py +6 -6
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/community/kmeans_endpoints.py +6 -6
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/community/labelpropagation_endpoints.py +6 -6
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/community/leiden_endpoints.py +6 -6
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/community/local_clustering_coefficient_endpoints.py +6 -6
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/community/louvain_endpoints.py +6 -6
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/community/maxkcut_endpoints.py +4 -4
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/community/modularity_endpoints.py +4 -4
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/community/modularity_optimization_endpoints.py +6 -6
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/community/scc_endpoints.py +6 -6
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/community/sllpa_endpoints.py +6 -6
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/community/triangle_count_endpoints.py +6 -6
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/community/triangles_endpoints.py +2 -2
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/community/wcc_endpoints.py +6 -6
- graphdatascience-2.0a1/src/graphdatascience/procedure_surface/api/debug_endpoints.py +43 -0
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/job_handle.py +4 -4
- graphdatascience-2.0a1/src/graphdatascience/procedure_surface/api/kge/__init__.py +17 -0
- graphdatascience-2.0a1/src/graphdatascience/procedure_surface/api/kge/kge_endpoints.py +69 -0
- graphdatascience-2.0a1/src/graphdatascience/procedure_surface/api/kge/kge_predict_endpoints.py +218 -0
- graphdatascience-2.0a1/src/graphdatascience/procedure_surface/api/kge/simple_rel_embedding_model.py +227 -0
- graphdatascience-2.0a1/src/graphdatascience/procedure_surface/api/license_endpoints.py +23 -0
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/model/graphsage_model.py +12 -12
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/model/link_prediction_model.py +8 -8
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/model/model_catalog_endpoints.py +1 -1
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/model/node_classification_model.py +11 -9
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/model/node_regression_model.py +7 -7
- graphdatascience-2.0a1/src/graphdatascience/procedure_surface/api/model/pipeline_model.py +52 -0
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/node_embedding/__init__.py +8 -0
- graphdatascience-2.0a1/src/graphdatascience/procedure_surface/api/node_embedding/fastpath_endpoints.py +280 -0
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/node_embedding/fastrp_endpoints.py +6 -6
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/node_embedding/graphsage_endpoints.py +5 -5
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/node_embedding/graphsage_predict_endpoints.py +5 -5
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/node_embedding/graphsage_train_endpoints.py +5 -5
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/node_embedding/hashgnn_endpoints.py +5 -5
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/node_embedding/node2vec_endpoints.py +5 -5
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/pathfinding/all_shortest_path_endpoints.py +3 -3
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/pathfinding/bfs_endpoints.py +5 -5
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/pathfinding/dfs_endpoints.py +5 -5
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/pathfinding/dijkstra_endpoints.py +5 -5
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/pathfinding/k_spanning_tree_endpoints.py +2 -2
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/pathfinding/longest_path_endpoints.py +2 -2
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/pathfinding/max_flow_endpoints.py +6 -6
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/pathfinding/max_flow_min_cost_endpoints.py +6 -6
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/pathfinding/prize_steiner_tree_endpoints.py +6 -6
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/pathfinding/random_walk_endpoints.py +5 -5
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/pathfinding/single_source_bellman_ford_endpoints.py +6 -6
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/pathfinding/single_source_delta_endpoints.py +6 -6
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/pathfinding/single_source_dijkstra_endpoints.py +5 -5
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/pathfinding/source_target_astar_endpoints.py +5 -5
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/pathfinding/source_target_dijkstra_endpoints.py +5 -5
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/pathfinding/source_target_yens_endpoints.py +5 -5
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/pathfinding/spanning_tree_endpoints.py +6 -6
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/pathfinding/steiner_tree_endpoints.py +6 -6
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/pipeline/__init__.py +2 -2
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/pipeline/link_prediction_pipeline.py +5 -5
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/pipeline/link_prediction_predict_endpoints.py +4 -4
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/pipeline/link_prediction_train_endpoints.py +6 -6
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/pipeline/node_classification_pipeline.py +6 -6
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/pipeline/node_classification_pipeline_results.py +1 -0
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/pipeline/node_classification_predict_endpoints.py +5 -5
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/pipeline/node_classification_train_endpoints.py +6 -6
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/pipeline/node_regression_pipeline.py +5 -5
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/pipeline/node_regression_pipeline_endpoints.py +9 -7
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/pipeline/node_regression_pipeline_protocol.py +4 -4
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/pipeline/node_regression_predict_endpoints.py +3 -3
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/projection_job_handle.py +3 -3
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/similarity/__init__.py +2 -0
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/similarity/knn_endpoints.py +6 -6
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/similarity/knn_filtered_endpoints.py +6 -6
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/similarity/node_similarity_endpoints.py +6 -6
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/similarity/node_similarity_filtered_endpoints.py +6 -6
- graphdatascience-2.0a1/src/graphdatascience/procedure_surface/api/similarity/similarity_functions.py +186 -0
- graphdatascience-2.0a1/src/graphdatascience/procedure_surface/api/topological_link_prediction_endpoints.py +187 -0
- graphdatascience-2.0a1/src/graphdatascience/procedure_surface/api/util_endpoints.py +93 -0
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/api/write_job_handle.py +2 -2
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/arrow/catalog/catalog_arrow_endpoints.py +36 -81
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/arrow/catalog/graph_backend_arrow.py +4 -3
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/arrow/catalog/graph_sampling_arrow_endpoints.py +4 -4
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/arrow/catalog/node_label_arrow_endpoints.py +4 -4
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/arrow/catalog/node_properties_arrow_endpoints.py +5 -5
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/arrow/catalog/relationship_arrow_endpoints.py +11 -12
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/arrow/catalog/scale_properties_arrow_endpoints.py +7 -7
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/arrow/centrality/articlerank_arrow_endpoints.py +8 -8
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/arrow/centrality/articulationpoints_arrow_endpoints.py +8 -8
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/arrow/centrality/betweenness_arrow_endpoints.py +8 -8
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/arrow/centrality/bridges_arrow_endpoints.py +5 -5
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/arrow/centrality/celf_arrow_endpoints.py +8 -8
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/arrow/centrality/closeness_arrow_endpoints.py +8 -8
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/arrow/centrality/closeness_harmonic_arrow_endpoints.py +8 -8
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/arrow/centrality/degree_arrow_endpoints.py +8 -8
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/arrow/centrality/eigenvector_arrow_endpoints.py +8 -8
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/arrow/centrality/pagerank_arrow_endpoints.py +8 -8
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/arrow/collapse_path_arrow_endpoints.py +2 -2
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/arrow/community/clique_counting_arrow_endpoints.py +8 -8
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/arrow/community/conductance_arrow_endpoints.py +3 -3
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/arrow/community/hdbscan_arrow_endpoints.py +8 -8
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/arrow/community/k1coloring_arrow_endpoints.py +8 -8
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/arrow/community/kcore_arrow_endpoints.py +8 -8
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/arrow/community/kmeans_arrow_endpoints.py +8 -8
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/arrow/community/labelpropagation_arrow_endpoints.py +8 -8
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/arrow/community/leiden_arrow_endpoints.py +8 -8
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/arrow/community/local_clustering_coefficient_arrow_endpoints.py +8 -8
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/arrow/community/louvain_arrow_endpoints.py +8 -8
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/arrow/community/maxkcut_arrow_endpoints.py +6 -6
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/arrow/community/modularity_arrow_endpoints.py +5 -5
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/arrow/community/modularity_optimization_arrow_endpoints.py +8 -8
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/arrow/community/scc_arrow_endpoints.py +8 -8
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/arrow/community/sllpa_arrow_endpoints.py +8 -8
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/arrow/community/triangle_count_arrow_endpoints.py +8 -8
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/procedure_surface/arrow/community/triangles_arrow_endpoints.py +2 -2
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- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/resources/imdb/serialize_imdb.py +0 -0
- {graphdatascience-1.22/src/graphdatascience/query_runner/protocol → graphdatascience-2.0a1/src/graphdatascience/resources/karate}/__init__.py +0 -0
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/resources/karate/karate_club.parquet.gzip +0 -0
- {graphdatascience-1.22/src/graphdatascience/resources → graphdatascience-2.0a1/src/graphdatascience/resources/lastfm}/__init__.py +0 -0
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/resources/lastfm/artist_nodes.parquet.gzip +0 -0
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/resources/lastfm/serialize_lastfm.py +0 -0
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/resources/lastfm/user_friend_df_directed.parquet.gzip +0 -0
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/resources/lastfm/user_listen_artist_rels.parquet.gzip +0 -0
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/resources/lastfm/user_nodes.parquet.gzip +0 -0
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/resources/lastfm/user_tag_artist_rels.parquet.gzip +0 -0
- {graphdatascience-1.22/src/graphdatascience/resources/cora → graphdatascience-2.0a1/src/graphdatascience/retry_utils}/__init__.py +0 -0
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/retry_utils/retry_config.py +0 -0
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/retry_utils/retry_utils.py +0 -0
- {graphdatascience-1.22/src/graphdatascience/resources/imdb → graphdatascience-2.0a1/src/graphdatascience/semantic_version}/__init__.py +0 -0
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/semantic_version/semantic_version.py +0 -0
- {graphdatascience-1.22/src/graphdatascience/resources/karate → graphdatascience-2.0a1/src/graphdatascience/server_version}/__init__.py +0 -0
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/server_version/server_version.py +0 -0
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/session/__init__.py +0 -0
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/session/algorithm_category.py +0 -0
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/session/aura_api.py +0 -0
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/session/cloud_location.py +0 -0
- {graphdatascience-1.22/src/graphdatascience/resources/lastfm → graphdatascience-2.0a1/src/graphdatascience/session/dbms}/__init__.py +0 -0
- {graphdatascience-1.22/src/graphdatascience/query_runner → graphdatascience-2.0a1/src/graphdatascience/session/dbms}/db_environment_resolver.py +0 -0
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/session/dbms/protocol_resolver.py +0 -0
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/session/dbms/protocol_version.py +0 -0
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/session/dbms_connection_info.py +0 -0
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/session/region_suggester.py +0 -0
- {graphdatascience-1.22/src/graphdatascience/retry_utils → graphdatascience-2.0a1/src/graphdatascience/session/remote_ops}/__init__.py +0 -0
- {graphdatascience-1.22/src/graphdatascience/query_runner/protocol → graphdatascience-2.0a1/src/graphdatascience/session/remote_ops}/arrow_config.py +0 -0
- {graphdatascience-1.22/src/graphdatascience/query_runner/protocol → graphdatascience-2.0a1/src/graphdatascience/session/remote_ops}/status.py +0 -0
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/session/session_info.py +0 -0
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/session/session_sizes.py +0 -0
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience.egg-info/dependency_links.txt +0 -0
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience.egg-info/not-zip-safe +0 -0
- {graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience.egg-info/top_level.txt +0 -0
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Summary: A Python client for the Neo4j Graph Data Science (GDS) library
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# Neo4j Graph Data Science Client
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# requires a working C++/torch toolchain and fails on many local machines (notably
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# macOS arm64). Instead we pull prebuilt wheels from the PyG wheel index, which ships
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{graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/arrow_client/arrow_info.py
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The host port of the GDS Arrow server (default is 8491)
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auth: ArrowAuthentication | None
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connection_info
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auth
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An implementation of ArrowAuthentication providing a pair to be used for basic authentication
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encrypted
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encrypted
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user_agent
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user_agent
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The user agent string to use for the connection. (default is `neo4j-graphdatascience-v[VERSION] pyarrow-v[PYARROW_VERSION])
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advertised_listen_address
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"""
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FlightUnavailableError,
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FlightInternalError,
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)
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if auth:
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try:
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except Exception:
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pass
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"""
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@@ -267,6 +232,14 @@ class AuthenticatedArrowClient:
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try:
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except Exception:
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pass
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@dataclass
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class ConnectionInfo:
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@@ -12,11 +12,11 @@ from pyarrow.types import is_dictionary
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from pydantic import BaseModel
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from graphdatascience.arrow_client.arrow_endpoint_version import ArrowEndpointVersion
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+
from graphdatascience.arrow_client.arrow_table_utils import table_from_pandas
|
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16
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from graphdatascience.arrow_client.authenticated_flight_client import AuthenticatedArrowClient, ConnectionInfo
|
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from graphdatascience.arrow_client.v1.data_mapper_utils import deserialize_single
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18
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from ...procedure_surface.arrow.error_handler import handle_flight_error
|
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-
from ...semantic_version.semantic_version import SemanticVersion
|
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20
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from ..progress_callback import ProgressCallback
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21
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22
22
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@@ -487,11 +487,13 @@ class GdsArrowClient:
|
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batch_size: int,
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progress_callback: ProgressCallback,
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) -> None:
|
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+
batches: list[RecordBatch]
|
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491
|
match data:
|
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491
492
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case pyarrow.Table():
|
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493
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batches = data.to_batches(batch_size)
|
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494
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case pandas.DataFrame():
|
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-
batches =
|
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495
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+
batches = table_from_pandas(data).to_batches(batch_size)
|
|
496
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+
|
|
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497
|
case _:
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batches = data
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499
|
|
|
@@ -562,11 +564,7 @@ class GdsArrowClient:
|
|
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562
564
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except Exception as e:
|
|
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565
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handle_flight_error(e)
|
|
564
566
|
arrow_table = self._sanitize_arrow_table(arrow_table)
|
|
565
|
-
|
|
566
|
-
return arrow_table.to_pandas(types_mapper=pandas.ArrowDtype) # type: ignore
|
|
567
|
-
else:
|
|
568
|
-
arrow_table = self._sanitize_arrow_table(arrow_table)
|
|
569
|
-
return arrow_table.to_pandas() # type: ignore
|
|
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|
+
return arrow_table.to_pandas(types_mapper=pandas.ArrowDtype) # type: ignore
|
|
570
568
|
|
|
571
569
|
def __enter__(self) -> GdsArrowClient:
|
|
572
570
|
return self
|
|
@@ -10,6 +10,7 @@ import pyarrow
|
|
|
10
10
|
from pyarrow import RecordBatch, flight
|
|
11
11
|
|
|
12
12
|
from graphdatascience.arrow_client.arrow_endpoint_version import ArrowEndpointVersion
|
|
13
|
+
from graphdatascience.arrow_client.arrow_table_utils import table_from_pandas
|
|
13
14
|
from graphdatascience.arrow_client.authenticated_flight_client import AuthenticatedArrowClient, ConnectionInfo
|
|
14
15
|
from graphdatascience.query_runner.termination_flag import TerminationFlag
|
|
15
16
|
|
|
@@ -504,14 +505,14 @@ class GdsArrowClient:
|
|
|
504
505
|
batch_size: int,
|
|
505
506
|
) -> list[list[pyarrow.RecordBatch]]:
|
|
506
507
|
if isinstance(data, pandas.DataFrame):
|
|
507
|
-
return [
|
|
508
|
+
return [table_from_pandas(data).to_batches(batch_size)]
|
|
508
509
|
|
|
509
510
|
if isinstance(data, pyarrow.Table):
|
|
510
511
|
return [data.to_batches(batch_size)]
|
|
511
512
|
|
|
512
513
|
if isinstance(data, list):
|
|
513
514
|
if all(isinstance(entry, pandas.DataFrame) for entry in data):
|
|
514
|
-
return [
|
|
515
|
+
return [table_from_pandas(entry).to_batches(batch_size) for entry in data]
|
|
515
516
|
|
|
516
517
|
if all(isinstance(entry, pyarrow.RecordBatch) for entry in data):
|
|
517
518
|
return [data]
|
{graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/arrow_client/v2/job_client.py
RENAMED
|
@@ -8,7 +8,7 @@ from tenacity import Retrying, retry_if_result
|
|
|
8
8
|
from graphdatascience.arrow_client.authenticated_flight_client import AuthenticatedArrowClient
|
|
9
9
|
from graphdatascience.arrow_client.v2.api_types import JobIdConfig, JobStatus
|
|
10
10
|
from graphdatascience.arrow_client.v2.data_mapper_utils import deserialize_single
|
|
11
|
-
from graphdatascience.
|
|
11
|
+
from graphdatascience.progress.progress_bar import TqdmProgressBar
|
|
12
12
|
from graphdatascience.query_runner.termination_flag import TerminationFlag
|
|
13
13
|
from graphdatascience.retry_utils.retry_utils import job_wait_strategy
|
|
14
14
|
|
|
@@ -2,7 +2,7 @@ from typing import Protocol
|
|
|
2
2
|
|
|
3
3
|
from pandas import DataFrame
|
|
4
4
|
|
|
5
|
-
from graphdatascience.graph
|
|
5
|
+
from graphdatascience.graph import Graph
|
|
6
6
|
|
|
7
7
|
|
|
8
8
|
class GraphConstructorFunc(Protocol):
|
|
@@ -13,4 +13,4 @@ class GraphConstructorFunc(Protocol):
|
|
|
13
13
|
relationships: DataFrame | list[DataFrame] | None = None,
|
|
14
14
|
concurrency: int | None = None,
|
|
15
15
|
undirected_relationship_types: list[str] | None = None,
|
|
16
|
-
) ->
|
|
16
|
+
) -> Graph: ...
|
|
@@ -5,14 +5,14 @@ import networkx as nx
|
|
|
5
5
|
from pandas import DataFrame
|
|
6
6
|
|
|
7
7
|
from graphdatascience.datasets.graph_constructor_func import GraphConstructorFunc
|
|
8
|
-
from graphdatascience.graph
|
|
8
|
+
from graphdatascience.graph import Graph
|
|
9
9
|
|
|
10
10
|
|
|
11
11
|
class NXLoader:
|
|
12
12
|
def __init__(self, graph_constructor: GraphConstructorFunc) -> None:
|
|
13
13
|
self._construct = graph_constructor
|
|
14
14
|
|
|
15
|
-
def load(self, nx_G: nx.Graph, graph_name: str, concurrency: int | None = None) ->
|
|
15
|
+
def load(self, nx_G: nx.Graph, graph_name: str, concurrency: int | None = None) -> Graph:
|
|
16
16
|
"""
|
|
17
17
|
Parameters
|
|
18
18
|
----------
|
|
@@ -25,7 +25,7 @@ class NXLoader:
|
|
|
25
25
|
|
|
26
26
|
Returns
|
|
27
27
|
-------
|
|
28
|
-
|
|
28
|
+
Graph
|
|
29
29
|
A handle to the graph.
|
|
30
30
|
"""
|
|
31
31
|
nodes, rels = self._parse(nx_G)
|
{graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/datasets/ogb_loader.py
RENAMED
|
@@ -10,7 +10,7 @@ import numpy.typing as npt
|
|
|
10
10
|
import pandas as pd
|
|
11
11
|
|
|
12
12
|
from graphdatascience.datasets.graph_constructor_func import GraphConstructorFunc
|
|
13
|
-
from graphdatascience.graph
|
|
13
|
+
from graphdatascience.graph import Graph
|
|
14
14
|
|
|
15
15
|
|
|
16
16
|
class _HomogeneousOGBGraphBase(TypedDict):
|
|
@@ -194,7 +194,7 @@ class OGBNLoader(OGBLoader):
|
|
|
194
194
|
dataset_root_path: str = "dataset",
|
|
195
195
|
graph_name: str | None = None,
|
|
196
196
|
concurrency: int | None = None,
|
|
197
|
-
) ->
|
|
197
|
+
) -> Graph:
|
|
198
198
|
"""
|
|
199
199
|
Parameters
|
|
200
200
|
----------
|
|
@@ -209,7 +209,7 @@ class OGBNLoader(OGBLoader):
|
|
|
209
209
|
|
|
210
210
|
Returns
|
|
211
211
|
-------
|
|
212
|
-
|
|
212
|
+
Graph
|
|
213
213
|
A handle to the graph.
|
|
214
214
|
"""
|
|
215
215
|
try:
|
|
@@ -326,7 +326,7 @@ class OGBLLoader(OGBLoader):
|
|
|
326
326
|
dataset_root_path: str = "dataset",
|
|
327
327
|
graph_name: str | None = None,
|
|
328
328
|
concurrency: int | None = None,
|
|
329
|
-
) ->
|
|
329
|
+
) -> Graph:
|
|
330
330
|
"""
|
|
331
331
|
Parameters
|
|
332
332
|
----------
|
|
@@ -341,7 +341,7 @@ class OGBLLoader(OGBLoader):
|
|
|
341
341
|
|
|
342
342
|
Returns
|
|
343
343
|
-------
|
|
344
|
-
|
|
344
|
+
Graph
|
|
345
345
|
A handle to the graph.
|
|
346
346
|
"""
|
|
347
347
|
try:
|
{graphdatascience-1.22 → graphdatascience-2.0a1}/src/graphdatascience/datasets/simple_file_loader.py
RENAMED
|
@@ -1,7 +1,6 @@
|
|
|
1
1
|
import pathlib
|
|
2
2
|
from typing import NamedTuple
|
|
3
3
|
|
|
4
|
-
from neo4j import __version__ as neo4j_driver_version
|
|
5
4
|
from pandas import DataFrame, read_parquet
|
|
6
5
|
|
|
7
6
|
|
|
@@ -11,9 +10,6 @@ class GraphResources(NamedTuple):
|
|
|
11
10
|
|
|
12
11
|
|
|
13
12
|
class SimpleDatasetLoader:
|
|
14
|
-
def __init__(self) -> None:
|
|
15
|
-
self._is_neo4j_4_driver = neo4j_driver_version.startswith("4.")
|
|
16
|
-
|
|
17
13
|
@staticmethod
|
|
18
14
|
def _path(package: str, resource: str) -> pathlib.Path:
|
|
19
15
|
from importlib.resources import files
|
|
@@ -25,10 +21,6 @@ class SimpleDatasetLoader:
|
|
|
25
21
|
file = self._path("graphdatascience.resources.cora", "cora_nodes.parquet.gzip")
|
|
26
22
|
nodes = read_parquet(file)
|
|
27
23
|
|
|
28
|
-
if self._is_neo4j_4_driver:
|
|
29
|
-
# features is read as an ndarray which was not supported in neo4j 4
|
|
30
|
-
nodes["features"] = nodes["features"].apply(lambda x: x.tolist())
|
|
31
|
-
|
|
32
24
|
rels = read_parquet(self._path("graphdatascience.resources.cora", "cora_rels.parquet.gzip"))
|
|
33
25
|
return GraphResources([nodes], [rels])
|
|
34
26
|
|
|
@@ -49,9 +41,6 @@ class SimpleDatasetLoader:
|
|
|
49
41
|
for n in nodes:
|
|
50
42
|
resource = self._path(package, f"imdb_{n}.parquet.gzip")
|
|
51
43
|
df = read_parquet(resource)
|
|
52
|
-
if self._is_neo4j_4_driver:
|
|
53
|
-
# features is read as an ndarray which was not supported in neo4j 4
|
|
54
|
-
df["plot_keywords"] = df["plot_keywords"].apply(lambda x: x.tolist())
|
|
55
44
|
node_dfs.append(df)
|
|
56
45
|
|
|
57
46
|
rel_dfs = []
|
|
@@ -2,8 +2,6 @@ import warnings
|
|
|
2
2
|
from functools import wraps
|
|
3
3
|
from typing import Any, Callable, TypeVar, cast
|
|
4
4
|
|
|
5
|
-
from ..caller_base import CallerBase
|
|
6
|
-
|
|
7
5
|
F = TypeVar("F", bound=Callable[..., Any])
|
|
8
6
|
|
|
9
7
|
|
|
@@ -12,7 +10,7 @@ def filter_id_func_deprecation_warning() -> Callable[[F], F]:
|
|
|
12
10
|
wraps(func)
|
|
13
11
|
|
|
14
12
|
@wraps(func)
|
|
15
|
-
def wrapper(self:
|
|
13
|
+
def wrapper(self: Any, *args: Any, **kwargs: Any) -> Any:
|
|
16
14
|
# GDS uses the numeric id to resolve the node
|
|
17
15
|
warnings.filterwarnings(
|
|
18
16
|
"ignore",
|
|
@@ -38,6 +36,11 @@ def filter_id_func_deprecation_warning() -> Callable[[F], F]:
|
|
|
38
36
|
message=r"warn: feature deprecated without replacement\. id is deprecated and will be removed without a replacement\.",
|
|
39
37
|
)
|
|
40
38
|
|
|
39
|
+
warnings.filterwarnings(
|
|
40
|
+
"ignore",
|
|
41
|
+
message=r".*is deprecated, use `element_id` instead",
|
|
42
|
+
)
|
|
43
|
+
|
|
41
44
|
return func(self, *args, **kwargs)
|
|
42
45
|
|
|
43
46
|
return cast(F, wrapper)
|
|
@@ -4,11 +4,11 @@ from datetime import datetime
|
|
|
4
4
|
from types import TracebackType
|
|
5
5
|
from typing import Any, Type
|
|
6
6
|
|
|
7
|
-
from graphdatascience.graph.
|
|
7
|
+
from graphdatascience.graph.graph_backend import GraphBackend
|
|
8
8
|
from graphdatascience.procedure_surface.api.catalog.graph_info import GraphInfo
|
|
9
9
|
|
|
10
10
|
|
|
11
|
-
class
|
|
11
|
+
class Graph:
|
|
12
12
|
"""
|
|
13
13
|
A graph object that represents a graph in the graph catalog.
|
|
14
14
|
It can be passed into algorithm endpoints to compute over the corresponding graph.
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@@ -19,7 +19,7 @@ class GraphV2:
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self._name = name
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self._backend = backend
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def __enter__(self:
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def __enter__(self: Graph) -> Graph:
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return self
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def __exit__(
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@@ -1,15 +1,16 @@
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from __future__ import annotations
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from graphdatascience.call_parameters import CallParameters
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from graphdatascience.graph
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from graphdatascience.graph import Graph
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from graphdatascience.graph.graph_backend import GraphBackend
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from graphdatascience.procedure_surface.api.catalog.graph_info import GraphInfo, GraphInfoWithDegrees
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from graphdatascience.query_runner.query_runner import QueryRunner
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def get_graph(name: str, query_runner: QueryRunner) ->
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def get_graph(name: str, query_runner: QueryRunner) -> Graph:
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backend = CypherGraphBackend(name, query_runner)
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return
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return Graph(name, backend)
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class CypherGraphBackend(GraphBackend):
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