glam4cm 0.1.0__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- glam4cm-0.1.0/LICENSE +21 -0
- glam4cm-0.1.0/PKG-INFO +86 -0
- glam4cm-0.1.0/README.md +36 -0
- glam4cm-0.1.0/pyproject.toml +47 -0
- glam4cm-0.1.0/setup.cfg +4 -0
- glam4cm-0.1.0/src/glam4cm/__init__.py +9 -0
- glam4cm-0.1.0/src/glam4cm/data_loading/__init__.py +0 -0
- glam4cm-0.1.0/src/glam4cm/data_loading/data.py +631 -0
- glam4cm-0.1.0/src/glam4cm/data_loading/encoding.py +76 -0
- glam4cm-0.1.0/src/glam4cm/data_loading/graph_dataset.py +940 -0
- glam4cm-0.1.0/src/glam4cm/data_loading/metadata.py +84 -0
- glam4cm-0.1.0/src/glam4cm/data_loading/models_dataset.py +361 -0
- glam4cm-0.1.0/src/glam4cm/data_loading/utils.py +20 -0
- glam4cm-0.1.0/src/glam4cm/downstream_tasks/__init__.py +0 -0
- glam4cm-0.1.0/src/glam4cm/downstream_tasks/bert_edge_classification.py +144 -0
- glam4cm-0.1.0/src/glam4cm/downstream_tasks/bert_graph_classification.py +137 -0
- glam4cm-0.1.0/src/glam4cm/downstream_tasks/bert_graph_classification_comp.py +156 -0
- glam4cm-0.1.0/src/glam4cm/downstream_tasks/bert_link_prediction.py +145 -0
- glam4cm-0.1.0/src/glam4cm/downstream_tasks/bert_node_classification.py +164 -0
- glam4cm-0.1.0/src/glam4cm/downstream_tasks/cm_gpt_edge_classification.py +73 -0
- glam4cm-0.1.0/src/glam4cm/downstream_tasks/cm_gpt_node_classification.py +76 -0
- glam4cm-0.1.0/src/glam4cm/downstream_tasks/cm_gpt_pretraining.py +64 -0
- glam4cm-0.1.0/src/glam4cm/downstream_tasks/common_args.py +160 -0
- glam4cm-0.1.0/src/glam4cm/downstream_tasks/create_dataset.py +51 -0
- glam4cm-0.1.0/src/glam4cm/downstream_tasks/gnn_edge_classification.py +106 -0
- glam4cm-0.1.0/src/glam4cm/downstream_tasks/gnn_graph_cls.py +101 -0
- glam4cm-0.1.0/src/glam4cm/downstream_tasks/gnn_link_prediction.py +109 -0
- glam4cm-0.1.0/src/glam4cm/downstream_tasks/gnn_node_classification.py +103 -0
- glam4cm-0.1.0/src/glam4cm/downstream_tasks/tf_idf_text_classification.py +22 -0
- glam4cm-0.1.0/src/glam4cm/downstream_tasks/utils.py +35 -0
- glam4cm-0.1.0/src/glam4cm/downstream_tasks/word2vec_text_classification.py +108 -0
- glam4cm-0.1.0/src/glam4cm/embeddings/__init__.py +0 -0
- glam4cm-0.1.0/src/glam4cm/embeddings/bert.py +72 -0
- glam4cm-0.1.0/src/glam4cm/embeddings/common.py +43 -0
- glam4cm-0.1.0/src/glam4cm/embeddings/fasttext.py +0 -0
- glam4cm-0.1.0/src/glam4cm/embeddings/tfidf.py +25 -0
- glam4cm-0.1.0/src/glam4cm/embeddings/w2v.py +41 -0
- glam4cm-0.1.0/src/glam4cm/encoding/__init__.py +0 -0
- glam4cm-0.1.0/src/glam4cm/encoding/common.py +0 -0
- glam4cm-0.1.0/src/glam4cm/encoding/encoders.py +100 -0
- glam4cm-0.1.0/src/glam4cm/graph2str/__init__.py +0 -0
- glam4cm-0.1.0/src/glam4cm/graph2str/common.py +34 -0
- glam4cm-0.1.0/src/glam4cm/graph2str/constants.py +15 -0
- glam4cm-0.1.0/src/glam4cm/graph2str/ontouml.py +141 -0
- glam4cm-0.1.0/src/glam4cm/graph2str/uml.py +0 -0
- glam4cm-0.1.0/src/glam4cm/lang2graph/__init__.py +0 -0
- glam4cm-0.1.0/src/glam4cm/lang2graph/archimate.py +31 -0
- glam4cm-0.1.0/src/glam4cm/lang2graph/bpmn.py +0 -0
- glam4cm-0.1.0/src/glam4cm/lang2graph/common.py +416 -0
- glam4cm-0.1.0/src/glam4cm/lang2graph/ecore.py +221 -0
- glam4cm-0.1.0/src/glam4cm/lang2graph/ontouml.py +169 -0
- glam4cm-0.1.0/src/glam4cm/lang2graph/utils.py +80 -0
- glam4cm-0.1.0/src/glam4cm/models/cmgpt.py +352 -0
- glam4cm-0.1.0/src/glam4cm/models/gnn_layers.py +273 -0
- glam4cm-0.1.0/src/glam4cm/models/hf.py +10 -0
- glam4cm-0.1.0/src/glam4cm/run.py +99 -0
- glam4cm-0.1.0/src/glam4cm/run_configs.py +126 -0
- glam4cm-0.1.0/src/glam4cm/settings.py +54 -0
- glam4cm-0.1.0/src/glam4cm/tokenization/__init__.py +0 -0
- glam4cm-0.1.0/src/glam4cm/tokenization/special_tokens.py +4 -0
- glam4cm-0.1.0/src/glam4cm/tokenization/utils.py +37 -0
- glam4cm-0.1.0/src/glam4cm/trainers/__init__.py +0 -0
- glam4cm-0.1.0/src/glam4cm/trainers/bert_classifier.py +105 -0
- glam4cm-0.1.0/src/glam4cm/trainers/cm_gpt_trainer.py +153 -0
- glam4cm-0.1.0/src/glam4cm/trainers/gnn_edge_classifier.py +126 -0
- glam4cm-0.1.0/src/glam4cm/trainers/gnn_graph_classifier.py +123 -0
- glam4cm-0.1.0/src/glam4cm/trainers/gnn_link_predictor.py +144 -0
- glam4cm-0.1.0/src/glam4cm/trainers/gnn_node_classifier.py +135 -0
- glam4cm-0.1.0/src/glam4cm/trainers/gnn_trainer.py +129 -0
- glam4cm-0.1.0/src/glam4cm/trainers/metrics.py +55 -0
- glam4cm-0.1.0/src/glam4cm/utils.py +194 -0
- glam4cm-0.1.0/src/glam4cm.egg-info/PKG-INFO +86 -0
- glam4cm-0.1.0/src/glam4cm.egg-info/SOURCES.txt +75 -0
- glam4cm-0.1.0/src/glam4cm.egg-info/dependency_links.txt +1 -0
- glam4cm-0.1.0/src/glam4cm.egg-info/entry_points.txt +2 -0
- glam4cm-0.1.0/src/glam4cm.egg-info/requires.txt +18 -0
- glam4cm-0.1.0/src/glam4cm.egg-info/top_level.txt +1 -0
glam4cm-0.1.0/LICENSE
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MIT License
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Copyright (c) 2025 Syed Juned Ali
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Permission is hereby granted, free of charge, to any person obtaining a copy
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of this software and associated documentation files (the "Software"), to deal
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in the Software without restriction, including without limitation the rights
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to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
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copies of the Software, and to permit persons to whom the Software is
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furnished to do so, subject to the following conditions:
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The above copyright notice and this permission notice shall be included in all
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copies or substantial portions of the Software.
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THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
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IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
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FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
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AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
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LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
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OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
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SOFTWARE.
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glam4cm-0.1.0/PKG-INFO
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Metadata-Version: 2.2
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Name: glam4cm
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Version: 0.1.0
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Summary: Graph Neural Networks and Language Models Trainer (Separate or combined) for conceptual models
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Author-email: Syed Juned Ali <syed.juned.ali@tuwien.ac.at>
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License: MIT License
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Copyright (c) 2025 Syed Juned Ali
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Permission is hereby granted, free of charge, to any person obtaining a copy
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of this software and associated documentation files (the "Software"), to deal
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in the Software without restriction, including without limitation the rights
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to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
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copies of the Software, and to permit persons to whom the Software is
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furnished to do so, subject to the following conditions:
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The above copyright notice and this permission notice shall be included in all
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copies or substantial portions of the Software.
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THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
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IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
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FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
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AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
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LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
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OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
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SOFTWARE.
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Project-URL: Homepage, https://github.com/junaidiiith/glam4cm
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Project-URL: Issues, https://github.com/junaidiiith/glam4cm/issues
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Requires-Python: >=3.8
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Description-Content-Type: text/markdown
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License-File: LICENSE
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Requires-Dist: langchain-text-splitters
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Requires-Dist: scikit-learn
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Requires-Dist: scipy
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Requires-Dist: torch
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Requires-Dist: numpy
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Requires-Dist: transformers
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Requires-Dist: sentence-transformers
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Requires-Dist: tqdm
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Requires-Dist: networkx
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Requires-Dist: torch_geometric
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Requires-Dist: pandas
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Requires-Dist: tensorboardX
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Requires-Dist: xmltodict
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Requires-Dist: fasttext
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Provides-Extra: dev
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Requires-Dist: pytest; extra == "dev"
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Requires-Dist: black; extra == "dev"
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# glam4cm
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The data in this archive is derived from the user-contributed content on the
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Cooking Stack Exchange website (https://cooking.stackexchange.com/), used under
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CC-BY-SA 3.0 (http://creativecommons.org/licenses/by-sa/3.0/).
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The original data dump can be downloaded from:
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https://archive.org/download/stackexchange/cooking.stackexchange.com.7z
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and details about the dump obtained from:
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https://archive.org/details/stackexchange
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We distribute two files, under CC-BY-SA 3.0:
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- cooking.stackexchange.txt, which contains all question titles and
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their associated tags (one question per line, tags are prefixed by
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the string "__label__") ;
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- cooking.stackexchange.id, which contains the corresponding row IDs,
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from the original data dump.
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Node classification
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Language Model
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Freezing parameters
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Effect of attributes
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Effect of edge information
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Edge of partial node type information
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GNN
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GCNConv, SAGEConv, GATConv
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Random Node Embeddings
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Bert Node Embeddings
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Finetuned Node Embeddings
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Random Edge Embeddings
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Bert Edge Embeddings
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Finetuned Edge Embeddings
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glam4cm-0.1.0/README.md
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# glam4cm
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The data in this archive is derived from the user-contributed content on the
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Cooking Stack Exchange website (https://cooking.stackexchange.com/), used under
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CC-BY-SA 3.0 (http://creativecommons.org/licenses/by-sa/3.0/).
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The original data dump can be downloaded from:
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https://archive.org/download/stackexchange/cooking.stackexchange.com.7z
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and details about the dump obtained from:
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https://archive.org/details/stackexchange
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We distribute two files, under CC-BY-SA 3.0:
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- cooking.stackexchange.txt, which contains all question titles and
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their associated tags (one question per line, tags are prefixed by
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the string "__label__") ;
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- cooking.stackexchange.id, which contains the corresponding row IDs,
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from the original data dump.
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Node classification
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Language Model
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Freezing parameters
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Effect of attributes
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Effect of edge information
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Edge of partial node type information
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GNN
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GCNConv, SAGEConv, GATConv
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Random Node Embeddings
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Bert Node Embeddings
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Finetuned Node Embeddings
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Random Edge Embeddings
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Bert Edge Embeddings
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Finetuned Edge Embeddings
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[build-system]
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requires = ["setuptools>=64", "wheel"]
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build-backend = "setuptools.build_meta"
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[project]
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name = "glam4cm"
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version = "0.1.0"
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description = "Graph Neural Networks and Language Models Trainer (Separate or combined) for conceptual models"
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authors = [
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{name = "Syed Juned Ali", email = "syed.juned.ali@tuwien.ac.at"}
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]
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dependencies = [
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"langchain-text-splitters",
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"scikit-learn",
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"scipy",
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"torch",
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"numpy",
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"transformers",
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"sentence-transformers",
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"tqdm",
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"networkx",
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"torch_geometric",
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"pandas",
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"tensorboardX",
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"xmltodict",
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"fasttext"
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]
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dynamic = ["readme"]
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license = {file = "LICENSE"}
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requires-python = ">=3.8"
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[project.optional-dependencies]
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dev = ["pytest", "black"]
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[project.scripts]
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glam4cm = "glam4cm.run:main"
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[tool.setuptools.dynamic]
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readme = {file = "README.md", content-type = "text/markdown"}
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[tool.setuptools]
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license-files = ["LICENSE"]
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[project.urls]
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Homepage = "https://github.com/junaidiiith/glam4cm"
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Issues = "https://github.com/junaidiiith/glam4cm/issues"
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glam4cm-0.1.0/setup.cfg
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File without changes
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